Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005173A_C01 KMC005173A_c01
(734 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAA06490.1| hypothetical protein [Cicer arietinum] 220 2e-66
pir||T09642 hypothetical protein precursor - alfalfa gi|537313|g... 219 2e-65
ref|NP_567894.1| putative protein; protein id: At4g32460.1, supp... 212 9e-64
pir||T05356 hypothetical protein F8B4.160 - Arabidopsis thaliana... 212 9e-64
pir||T10174 hypothetical protein - castor bean gi|1621268|emb|CA... 206 3e-63
>emb|CAA06490.1| hypothetical protein [Cicer arietinum]
Length = 180
Score = 220 bits (560), Expect(2) = 2e-66
Identities = 107/118 (90%), Positives = 114/118 (95%)
Frame = -3
Query: 732 DDHSPLPGWMVESLKAVKYIDSPHFSVPEGTRAVELVAGKESAIAQVARTVPGKTYVLSF 553
D+HSPLPGWMVESLKAVKY+DS HFSVPEGTRA+ELVAGKESAIAQVART+PGKTYVLSF
Sbjct: 36 DNHSPLPGWMVESLKAVKYLDSSHFSVPEGTRAIELVAGKESAIAQVARTIPGKTYVLSF 95
Query: 552 SVGDANNSCEGSMIVEAFAGRDTVKVPYQSKGKGGFKRAALRFVAVSPRTRVMFLSTF 379
SVGDA+NSCEGSMIVEAFAGRDTVKVPYQSKGKGGFKRA L+FVAV RTR+MFLSTF
Sbjct: 96 SVGDASNSCEGSMIVEAFAGRDTVKVPYQSKGKGGFKRAVLKFVAVGSRTRIMFLSTF 153
Score = 55.5 bits (132), Expect(2) = 2e-66
Identities = 24/28 (85%), Positives = 27/28 (95%)
Frame = -1
Query: 380 FYTMRSDDFSSLCGPVVDDVKLLSLRKP 297
FY+MR+DD SSLCGPV+DDVKLLSLRKP
Sbjct: 153 FYSMRTDDLSSLCGPVIDDVKLLSLRKP 180
>pir||T09642 hypothetical protein precursor - alfalfa gi|537313|gb|AAB41813.1|
unknown protein [Medicago sativa]
Length = 375
Score = 219 bits (558), Expect(2) = 2e-65
Identities = 107/118 (90%), Positives = 114/118 (95%)
Frame = -3
Query: 732 DDHSPLPGWMVESLKAVKYIDSPHFSVPEGTRAVELVAGKESAIAQVARTVPGKTYVLSF 553
DDHSPLPGWMVESLKAVKY+DS HFSVP+GTRAVELVAGKESAIAQVART+PGKTYVLSF
Sbjct: 231 DDHSPLPGWMVESLKAVKYLDSGHFSVPQGTRAVELVAGKESAIAQVARTIPGKTYVLSF 290
Query: 552 SVGDANNSCEGSMIVEAFAGRDTVKVPYQSKGKGGFKRAALRFVAVSPRTRVMFLSTF 379
SVGDA+NSCEGSMIVEAFAG+DT+KVPY SKGKGGFKRAAL+FVAV RTRVMFLSTF
Sbjct: 291 SVGDASNSCEGSMIVEAFAGKDTIKVPYSSKGKGGFKRAALKFVAVGTRTRVMFLSTF 348
Score = 52.8 bits (125), Expect(2) = 2e-65
Identities = 23/27 (85%), Positives = 26/27 (96%)
Frame = -1
Query: 380 FYTMRSDDFSSLCGPVVDDVKLLSLRK 300
FY+MRSDD SSLCGPV+DDVKLLS+RK
Sbjct: 348 FYSMRSDDLSSLCGPVIDDVKLLSVRK 374
>ref|NP_567894.1| putative protein; protein id: At4g32460.1, supported by cDNA:
37529. [Arabidopsis thaliana] gi|21593257|gb|AAM65206.1|
unknown [Arabidopsis thaliana]
Length = 365
Score = 212 bits (539), Expect(2) = 9e-64
Identities = 102/118 (86%), Positives = 112/118 (94%)
Frame = -3
Query: 732 DDHSPLPGWMVESLKAVKYIDSPHFSVPEGTRAVELVAGKESAIAQVARTVPGKTYVLSF 553
DDHSPLPGWMVESLKAVKYIDS HFSVP+G RAVELVAGKESA+AQV RT+PGKTYVLSF
Sbjct: 221 DDHSPLPGWMVESLKAVKYIDSDHFSVPQGRRAVELVAGKESAVAQVVRTIPGKTYVLSF 280
Query: 552 SVGDANNSCEGSMIVEAFAGRDTVKVPYQSKGKGGFKRAALRFVAVSPRTRVMFLSTF 379
SVGDA+N+C GSMIVEAFAG+DT+KVPY+SKGKGGFKR++LRFVAVS RTRVMF STF
Sbjct: 281 SVGDASNACAGSMIVEAFAGKDTIKVPYESKGKGGFKRSSLRFVAVSSRTRVMFYSTF 338
Score = 54.3 bits (129), Expect(2) = 9e-64
Identities = 23/28 (82%), Positives = 26/28 (92%)
Frame = -1
Query: 380 FYTMRSDDFSSLCGPVVDDVKLLSLRKP 297
FY MR+DDFSSLCGPV+DDVKLLS R+P
Sbjct: 338 FYAMRNDDFSSLCGPVIDDVKLLSARRP 365
>pir||T05356 hypothetical protein F8B4.160 - Arabidopsis thaliana
gi|4049348|emb|CAA22573.1| putative protein [Arabidopsis
thaliana] gi|7270150|emb|CAB79963.1| putative protein
[Arabidopsis thaliana]
Length = 325
Score = 212 bits (539), Expect(2) = 9e-64
Identities = 102/118 (86%), Positives = 112/118 (94%)
Frame = -3
Query: 732 DDHSPLPGWMVESLKAVKYIDSPHFSVPEGTRAVELVAGKESAIAQVARTVPGKTYVLSF 553
DDHSPLPGWMVESLKAVKYIDS HFSVP+G RAVELVAGKESA+AQV RT+PGKTYVLSF
Sbjct: 181 DDHSPLPGWMVESLKAVKYIDSDHFSVPQGRRAVELVAGKESAVAQVVRTIPGKTYVLSF 240
Query: 552 SVGDANNSCEGSMIVEAFAGRDTVKVPYQSKGKGGFKRAALRFVAVSPRTRVMFLSTF 379
SVGDA+N+C GSMIVEAFAG+DT+KVPY+SKGKGGFKR++LRFVAVS RTRVMF STF
Sbjct: 241 SVGDASNACAGSMIVEAFAGKDTIKVPYESKGKGGFKRSSLRFVAVSSRTRVMFYSTF 298
Score = 54.3 bits (129), Expect(2) = 9e-64
Identities = 23/28 (82%), Positives = 26/28 (92%)
Frame = -1
Query: 380 FYTMRSDDFSSLCGPVVDDVKLLSLRKP 297
FY MR+DDFSSLCGPV+DDVKLLS R+P
Sbjct: 298 FYAMRNDDFSSLCGPVIDDVKLLSARRP 325
>pir||T10174 hypothetical protein - castor bean gi|1621268|emb|CAB02653.1|
unknown [Ricinus communis]
Length = 364
Score = 206 bits (524), Expect(2) = 3e-63
Identities = 100/118 (84%), Positives = 110/118 (92%)
Frame = -3
Query: 732 DDHSPLPGWMVESLKAVKYIDSPHFSVPEGTRAVELVAGKESAIAQVARTVPGKTYVLSF 553
DDHSPLPGWMVESLKAVKYID HFSVP+G RA+ELVAGKESAIAQVARTV GKTY LSF
Sbjct: 220 DDHSPLPGWMVESLKAVKYIDVDHFSVPQGRRAIELVAGKESAIAQVARTVIGKTYTLSF 279
Query: 552 SVGDANNSCEGSMIVEAFAGRDTVKVPYQSKGKGGFKRAALRFVAVSPRTRVMFLSTF 379
+VGDA+NSCEGSM+VEAFAG+DT+KVPY+SKGKGGFKRA LRFVAV+ RTR+MF STF
Sbjct: 280 AVGDASNSCEGSMVVEAFAGKDTLKVPYESKGKGGFKRAVLRFVAVANRTRIMFYSTF 337
Score = 58.5 bits (140), Expect(2) = 3e-63
Identities = 26/28 (92%), Positives = 28/28 (99%)
Frame = -1
Query: 380 FYTMRSDDFSSLCGPVVDDVKLLSLRKP 297
FYTMRSDDFSSLCGPV+DDVKLLS+RKP
Sbjct: 337 FYTMRSDDFSSLCGPVLDDVKLLSVRKP 364
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 636,754,056
Number of Sequences: 1393205
Number of extensions: 14234918
Number of successful extensions: 41113
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 38143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40833
length of database: 448,689,247
effective HSP length: 120
effective length of database: 281,504,647
effective search space used: 34906576228
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
