Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005164A_C01 KMC005164A_c01
(551 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_196949.1| early nodule-specific protein - like; protein i... 142 3e-33
gb|AAL68830.1|AF463407_1 Enod8.3 [Medicago truncatula] 101 7e-21
pir||S59943 early nodulin 8 precursor - alfalfa gi|304037|gb|AAB... 100 1e-20
gb|AAL68832.1|AF463407_3 Enod8.1 [Medicago truncatula] 100 2e-20
pir||T52338 early nodule-specific protein ENOD8 [imported] - bar... 100 2e-20
>ref|NP_196949.1| early nodule-specific protein - like; protein id: At5g14450.1
[Arabidopsis thaliana] gi|11357276|pir||T48618 early
nodule-specific protein-like - Arabidopsis thaliana
gi|7573470|emb|CAB87784.1| early nodule-specific
protein-like [Arabidopsis thaliana]
gi|26451820|dbj|BAC43003.1| putative early
nodule-specific protein [Arabidopsis thaliana]
gi|28950957|gb|AAO63402.1| At5g14450 [Arabidopsis
thaliana]
Length = 389
Score = 142 bits (358), Expect = 3e-33
Identities = 64/117 (54%), Positives = 81/117 (68%)
Frame = -1
Query: 551 LKDRVVKLRTELPEAAITYVDLYAAKYGLISNTQHEGFVDPLPICFGYHVNDTHIWFGTI 372
LK+ V+ LR EL +AAITYVD+Y AKY ++SN + GF +PL +C GYH HIW G
Sbjct: 272 LKETVINLRKELTQAAITYVDVYTAKYEMMSNPKKLGFANPLKVCCGYHEKYDHIWCGNK 331
Query: 371 GTANGKDVFGNACEKPSMYVNWDGVHYPEAANHRLANRILNGSFTDPPTLITQACYR 201
G N +++G +C P M V+WDGVHY EAAN +A+R LNG TDPP IT+ACYR
Sbjct: 332 GKVNNTEIYGGSCPNPVMAVSWDGVHYTEAANKHVADRTLNGLLTDPPVPITRACYR 388
>gb|AAL68830.1|AF463407_1 Enod8.3 [Medicago truncatula]
Length = 299
Score = 101 bits (251), Expect = 7e-21
Identities = 53/121 (43%), Positives = 72/121 (58%), Gaps = 4/121 (3%)
Frame = -1
Query: 551 LKDRVVKLRTELPEAAITYVDLYAAKYGLISNTQHEGFVDPLPICFG----YHVNDTHIW 384
LK+ + +LR +LP AAITYVD+Y+ KY L N + GF PL C G Y+ N
Sbjct: 179 LKEALAQLRKDLPLAAITYVDIYSPKYSLFQNPKKYGFELPLVACCGNGGKYNYN-IRAG 237
Query: 383 FGTIGTANGKDVFGNACEKPSMYVNWDGVHYPEAANHRLANRILNGSFTDPPTLITQACY 204
G NG + +C+KPS + WDG HY EAAN + ++I NG+FTDPP + +ACY
Sbjct: 238 CGATININGTNTVVGSCKKPSTRIIWDGTHYTEAANKIVFDQISNGAFTDPPIPLNRACY 297
Query: 203 R 201
+
Sbjct: 298 K 298
>pir||S59943 early nodulin 8 precursor - alfalfa gi|304037|gb|AAB41547.1| early
nodulin [Medicago sativa]
Length = 381
Score = 100 bits (249), Expect = 1e-20
Identities = 51/119 (42%), Positives = 71/119 (58%), Gaps = 2/119 (1%)
Frame = -1
Query: 551 LKDRVVKLRTELPEAAITYVDLYAAKYGLISNTQHEGFVDPLPICFGYHVNDTHIWFGTI 372
LK+ + +LR++LP AAITYVD+Y+ KY L +N + GF P C GY + +I G
Sbjct: 263 LKEALAQLRSDLPLAAITYVDIYSPKYSLFTNPKKYGFELPYVACCGYG-GEYNIGAGCG 321
Query: 371 GT--ANGKDVFGNACEKPSMYVNWDGVHYPEAANHRLANRILNGSFTDPPTLITQACYR 201
T NG + +C+ PS + WDG HY EAAN + ++I G+F DPP + ACYR
Sbjct: 322 ATINVNGTKIVAGSCKNPSTRITWDGTHYTEAANKIVFDQISTGAFNDPPISLDMACYR 380
>gb|AAL68832.1|AF463407_3 Enod8.1 [Medicago truncatula]
Length = 381
Score = 100 bits (248), Expect = 2e-20
Identities = 50/118 (42%), Positives = 68/118 (57%), Gaps = 1/118 (0%)
Frame = -1
Query: 551 LKDRVVKLRTELPEAAITYVDLYAAKYGLISNTQHEGFVDPLPICFGYHVN-DTHIWFGT 375
LK+ + +LR+ L AAITYVD+Y KY L +N + GF P C GY + + G
Sbjct: 263 LKEALAELRSNLSSAAITYVDIYTPKYSLFTNPEKYGFELPFVACCGYGGEYNIGVGCGA 322
Query: 374 IGTANGKDVFGNACEKPSMYVNWDGVHYPEAANHRLANRILNGSFTDPPTLITQACYR 201
NG + +C+ PS + WDGVHY EAAN + ++IL G F DPP + +ACYR
Sbjct: 323 SININGTKIVAGSCKNPSTRIIWDGVHYTEAANEIVFSQILTGVFNDPPISLDRACYR 380
>pir||T52338 early nodule-specific protein ENOD8 [imported] - barrel medic
gi|3328240|gb|AAC26810.1| early nodule-specific protein
[Medicago truncatula]
Length = 381
Score = 100 bits (248), Expect = 2e-20
Identities = 50/118 (42%), Positives = 68/118 (57%), Gaps = 1/118 (0%)
Frame = -1
Query: 551 LKDRVVKLRTELPEAAITYVDLYAAKYGLISNTQHEGFVDPLPICFGYHVN-DTHIWFGT 375
LK+ + +LR+ L AAITYVD+Y KY L +N + GF P C GY + + G
Sbjct: 263 LKEALAELRSNLSSAAITYVDIYTPKYSLFTNPEKYGFELPFVACCGYGGEYNIGVGCGA 322
Query: 374 IGTANGKDVFGNACEKPSMYVNWDGVHYPEAANHRLANRILNGSFTDPPTLITQACYR 201
NG + +C+ PS + WDGVHY EAAN + ++IL G F DPP + +ACYR
Sbjct: 323 SININGTKIVAGSCKNPSTRIIWDGVHYTEAANEIVFSQILTGVFNDPPISLDRACYR 380
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 497,109,341
Number of Sequences: 1393205
Number of extensions: 11099185
Number of successful extensions: 21333
Number of sequences better than 10.0: 155
Number of HSP's better than 10.0 without gapping: 20827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21246
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 19234190289
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
