Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005160A_C01 KMC005160A_c01
(586 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P21727|CPTR_PEA TRIOSE PHOSPHATE/PHOSPHATE TRANSLOCATOR, CHLO... 302 2e-81
gb|AAF86906.1|AF223358_1 triose phosphate/phosphate translocator... 262 2e-69
pir||S42583 phosphate translocator, chloroplast - common tobacco... 245 3e-64
gb|AAM65042.1| phosphate/triose-phosphate translocator precursor... 244 6e-64
dbj|BAB08256.1| phosphate/triose-phosphate translocator precurso... 243 1e-63
>sp|P21727|CPTR_PEA TRIOSE PHOSPHATE/PHOSPHATE TRANSLOCATOR, CHLOROPLAST PRECURSOR
(CTPT) (P36) (E30) gi|100071|pir||S23774 triose
phosphate/3-phosphoglycerate/phosphate translocator
precursor - garden pea gi|20691|emb|CAA38451.1|
chloroplast import receptor p36 [Pisum sativum]
gi|20853|emb|CAA48210.1| phosphate translocator [Pisum
sativum] gi|228551|prf||1805409A phosphate translocator
Length = 402
Score = 302 bits (773), Expect = 2e-81
Identities = 155/191 (81%), Positives = 166/191 (86%), Gaps = 3/191 (1%)
Frame = +3
Query: 21 MESRVLSRAT---ALPHLRRLPRESVSSNASLVSVRAIGSVADGGNLIWGRQLRPELCSP 191
MESRVLSRAT +LP L +L R ++ NASL SV++ GSV+DGGNL+WGRQLRPELCSP
Sbjct: 1 MESRVLSRATTLSSLPTLNKLHRLPLA-NASLPSVKSFGSVSDGGNLVWGRQLRPELCSP 59
Query: 192 ALKKDAVLLRPCLAAASSPAGGSDSAGEAKVAPVGFFAKYPALVTGFFFFTWYFLNVIFN 371
LKK A LLRPC A A GG+DSAGE KVAPVGFF++YPAL TGFFFFTWYFLNVIFN
Sbjct: 60 VLKKGASLLRPCPATA----GGNDSAGEEKVAPVGFFSRYPALTTGFFFFTWYFLNVIFN 115
Query: 372 ILNKKIYNYFPYPYFVSVIHLFVGVVYCLVSWTVGLPKRAPIDSNQLKLLIPVAVCHALG 551
ILNKKIYNYFPYPYFVSVIHL VGVVYCLVSWTVGLPKRAPID N LKLLIPVAVCHALG
Sbjct: 116 ILNKKIYNYFPYPYFVSVIHLAVGVVYCLVSWTVGLPKRAPIDGNLLKLLIPVAVCHALG 175
Query: 552 HVTSNVSFAAV 584
HVTSNVSFAAV
Sbjct: 176 HVTSNVSFAAV 186
>gb|AAF86906.1|AF223358_1 triose phosphate/phosphate translocator precursor [Mesembryanthemum
crystallinum]
Length = 404
Score = 262 bits (670), Expect = 2e-69
Identities = 137/195 (70%), Positives = 153/195 (78%), Gaps = 7/195 (3%)
Frame = +3
Query: 21 MESRVLSRATALPHLRRLPR-ESVSSNASLVSVRAIGSVADGGNLIWGRQLRPELC---- 185
MESRVLSRATA+ L RL R +++ + +V+ +G+V DGGNLIWGRQLRP L
Sbjct: 1 MESRVLSRATAIAALPRLSRPRREAASLGIAAVKPVGAVKDGGNLIWGRQLRPVLLLEPV 60
Query: 186 --SPALKKDAVLLRPCLAAASSPAGGSDSAGEAKVAPVGFFAKYPALVTGFFFFTWYFLN 359
P +K++ ++PC AAA GSDSAGEAKV GF KYPALVTGFFFF WYFLN
Sbjct: 61 QTGPVSRKESTAVQPCRAAAE----GSDSAGEAKV---GFLQKYPALVTGFFFFMWYFLN 113
Query: 360 VIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLVSWTVGLPKRAPIDSNQLKLLIPVAVC 539
VIFNILNKKIYNYFPYPYFVSVIHL VGV+YCLVSW VGLPKRAPID N LKLLIPVA+C
Sbjct: 114 VIFNILNKKIYNYFPYPYFVSVIHLLVGVIYCLVSWAVGLPKRAPIDGNLLKLLIPVALC 173
Query: 540 HALGHVTSNVSFAAV 584
HALGHVTSNVSFAAV
Sbjct: 174 HALGHVTSNVSFAAV 188
>pir||S42583 phosphate translocator, chloroplast - common tobacco
gi|403023|emb|CAA52979.1| phosphate translocator
[Nicotiana tabacum]
Length = 401
Score = 245 bits (626), Expect = 3e-64
Identities = 133/191 (69%), Positives = 149/191 (77%), Gaps = 3/191 (1%)
Frame = +3
Query: 21 MESRVLSRATA---LPHLRRLPRESVSSNASLVSVRAIGSVADGGNLIWGRQLRPELCSP 191
MESRVL+ ATA LP LR+ P +++ + + IG+V+ G NLIWGRQLRP++
Sbjct: 1 MESRVLTGATAIRGLPLLRK-PVVKLTAASFPTVAKPIGAVSGGANLIWGRQLRPDILLE 59
Query: 192 ALKKDAVLLRPCLAAASSPAGGSDSAGEAKVAPVGFFAKYPALVTGFFFFTWYFLNVIFN 371
A K + +PC AASSPA GSDSAG+AKV GFF K L+TGFFFF WYFLNVIFN
Sbjct: 60 ASPKRESM-KPCFTAASSPAEGSDSAGDAKV---GFFNK-ATLITGFFFFMWYFLNVIFN 114
Query: 372 ILNKKIYNYFPYPYFVSVIHLFVGVVYCLVSWTVGLPKRAPIDSNQLKLLIPVAVCHALG 551
ILNKKIYNYFPYPYFVSVIHL VGVVYCL+SWTVGLPKRAPIDS QLKLL PVA CHALG
Sbjct: 115 ILNKKIYNYFPYPYFVSVIHLAVGVVYCLISWTVGLPKRAPIDSTQLKLLTPVAFCHALG 174
Query: 552 HVTSNVSFAAV 584
HVTSNVSFAAV
Sbjct: 175 HVTSNVSFAAV 185
>gb|AAM65042.1| phosphate/triose-phosphate translocator precursor [Arabidopsis
thaliana]
Length = 410
Score = 244 bits (623), Expect = 6e-64
Identities = 137/200 (68%), Positives = 155/200 (77%), Gaps = 12/200 (6%)
Frame = +3
Query: 21 MESRVLSRATA----LPHLRR----LPRESVSSNASLVSVRAIGSVADGGNLIWGRQLRP 176
MESRVL RATA +P LRR + R+ ++++S SV+ IG + +G NLI GRQLRP
Sbjct: 1 MESRVLLRATANVVGIPKLRRPIGAIHRQFSTASSSSFSVKPIGGIGEGANLISGRQLRP 60
Query: 177 ELC--SPALK--KDAVLLRPCLAAASSPAGGSDSAGEAKVAPVGFFAKYPALVTGFFFFT 344
L S A+ + +L+P AAA A G D+AGEAKV GF AKYP LVTGFFFF
Sbjct: 61 ILLLDSSAINGGEKREILKPVKAAA---AEGGDTAGEAKV---GFLAKYPWLVTGFFFFM 114
Query: 345 WYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLVSWTVGLPKRAPIDSNQLKLLI 524
WYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCL+SW+VGLPKRAPIDSN LK+LI
Sbjct: 115 WYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLISWSVGLPKRAPIDSNLLKVLI 174
Query: 525 PVAVCHALGHVTSNVSFAAV 584
PVAVCHALGHVTSNVSFAAV
Sbjct: 175 PVAVCHALGHVTSNVSFAAV 194
>dbj|BAB08256.1| phosphate/triose-phosphate translocator precursor [Arabidopsis
thaliana]
Length = 426
Score = 243 bits (620), Expect = 1e-63
Identities = 136/200 (68%), Positives = 155/200 (77%), Gaps = 12/200 (6%)
Frame = +3
Query: 21 MESRVLSRATA----LPHLRR----LPRESVSSNASLVSVRAIGSVADGGNLIWGRQLRP 176
MESRVL RATA +P LRR + R+ ++++S SV+ IG + +G NLI GRQLRP
Sbjct: 1 MESRVLLRATANVVGIPKLRRPIGAIHRQFSTASSSSFSVKPIGGIGEGANLISGRQLRP 60
Query: 177 ELC--SPALK--KDAVLLRPCLAAASSPAGGSDSAGEAKVAPVGFFAKYPALVTGFFFFT 344
L S A+ + +L+P AAA A G D+AG+AKV GF AKYP LVTGFFFF
Sbjct: 61 ILLLDSSAINGGEKREILKPVKAAA---AEGGDTAGDAKV---GFLAKYPWLVTGFFFFM 114
Query: 345 WYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLVSWTVGLPKRAPIDSNQLKLLI 524
WYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCL+SW+VGLPKRAPIDSN LK+LI
Sbjct: 115 WYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLISWSVGLPKRAPIDSNLLKVLI 174
Query: 525 PVAVCHALGHVTSNVSFAAV 584
PVAVCHALGHVTSNVSFAAV
Sbjct: 175 PVAVCHALGHVTSNVSFAAV 194
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 593,222,273
Number of Sequences: 1393205
Number of extensions: 15392092
Number of successful extensions: 90946
Number of sequences better than 10.0: 284
Number of HSP's better than 10.0 without gapping: 74751
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 89465
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 21997688174
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
