Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005118A_C01 KMC005118A_c01
(593 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P48977|ADH_MALDO Alcohol dehydrogenase gi|1362042|pir||S57650... 200 1e-50
gb|AAN03476.1| alcohol dehydrogenase 1 [Glycine max] 195 4e-49
sp|P12886|ADH1_PEA Alcohol dehydrogenase 1 gi|81891|pir||S00912 ... 194 5e-49
gb|AAB86869.1| alcohol dehydrogenase [Pyrus communis] 194 7e-49
gb|AAB65840.1| alcohol dehydrogenase gi|9885272|gb|AAG01381.1|AF... 194 9e-49
>sp|P48977|ADH_MALDO Alcohol dehydrogenase gi|1362042|pir||S57650 alcohol dehydrogenase
(EC 1.1.1.1) - apple tree gi|886885|emb|CAA88271.1|
alcohol dehydrogenase [Malus x domestica]
Length = 380
Score = 200 bits (509), Expect = 1e-50
Identities = 91/115 (79%), Positives = 107/115 (92%)
Frame = -3
Query: 582 VDRAIECTGNIQATISAFECLHDGWGVAVTVGVPTKDAEFKTHPIHFMEGRTLKGTFYGN 403
VDR+IECTG+ +A ISAFEC+HDGWGVAV VGVP KDA FKTHP++F+ RTLKGTF+GN
Sbjct: 266 VDRSIECTGSTEAMISAFECVHDGWGVAVLVGVPHKDAVFKTHPVNFLNERTLKGTFFGN 325
Query: 402 FQTRSDIPSLVEKYMNKELELEKFITHSVPFSEINKAFEYILKGEGIRCLIRMQE 238
++TR+DIPS+VEKYMNKELELEKFITH VPFSEINKAFEY+LKGEG+RC+IRM+E
Sbjct: 326 YKTRTDIPSVVEKYMNKELELEKFITHKVPFSEINKAFEYMLKGEGLRCIIRMEE 380
>gb|AAN03476.1| alcohol dehydrogenase 1 [Glycine max]
Length = 367
Score = 195 bits (495), Expect = 4e-49
Identities = 91/118 (77%), Positives = 106/118 (89%)
Frame = -3
Query: 591 NG*VDRAIECTGNIQATISAFECLHDGWGVAVTVGVPTKDAEFKTHPIHFMEGRTLKGTF 412
NG VDRAIECTG+IQA+ISAFEC HDGWG AV VGVP KD EFKT+P+ FMEGRTLKGTF
Sbjct: 250 NGGVDRAIECTGSIQASISAFECTHDGWGTAVLVGVPKKDVEFKTNPMKFMEGRTLKGTF 309
Query: 411 YGNFQTRSDIPSLVEKYMNKELELEKFITHSVPFSEINKAFEYILKGEGIRCLIRMQE 238
YG+++ R+DIP +VEKY+NKELEL+KFITHSVPFS+IN AF+ +LKGEGIRCLI M+E
Sbjct: 310 YGHYRPRTDIPGVVEKYLNKELELDKFITHSVPFSKINTAFDLMLKGEGIRCLICMEE 367
>sp|P12886|ADH1_PEA Alcohol dehydrogenase 1 gi|81891|pir||S00912 alcohol dehydrogenase
(EC 1.1.1.1) 1 - garden pea gi|20639|emb|CAA29609.1|
alcohol dehydrogenase [Pisum sativum]
Length = 380
Score = 194 bits (494), Expect = 5e-49
Identities = 88/118 (74%), Positives = 107/118 (90%)
Frame = -3
Query: 591 NG*VDRAIECTGNIQATISAFECLHDGWGVAVTVGVPTKDAEFKTHPIHFMEGRTLKGTF 412
NG VDRA+ECTG+IQA ISAFEC+HDGWGVAV VGVP+KD FKTHP++F+ RTLKGTF
Sbjct: 263 NGGVDRAVECTGSIQAMISAFECVHDGWGVAVLVGVPSKDDAFKTHPMNFLNERTLKGTF 322
Query: 411 YGNFQTRSDIPSLVEKYMNKELELEKFITHSVPFSEINKAFEYILKGEGIRCLIRMQE 238
YGN++ R+D+P++VEKYM ELELEKFITH+VPFSEINKAF+Y+LKGE IRC+I+M+E
Sbjct: 323 YGNYKPRTDLPNVVEKYMKGELELEKFITHTVPFSEINKAFDYMLKGESIRCIIKMEE 380
>gb|AAB86869.1| alcohol dehydrogenase [Pyrus communis]
Length = 330
Score = 194 bits (493), Expect = 7e-49
Identities = 87/118 (73%), Positives = 107/118 (89%)
Frame = -3
Query: 591 NG*VDRAIECTGNIQATISAFECLHDGWGVAVTVGVPTKDAEFKTHPIHFMEGRTLKGTF 412
NG VDR+IECTG+++ ISAFEC+HDGWGVAV VGVP K+A FKTHP++F+ RTLKGTF
Sbjct: 213 NGGVDRSIECTGSVEFMISAFECVHDGWGVAVLVGVPHKEAVFKTHPLNFLNERTLKGTF 272
Query: 411 YGNFQTRSDIPSLVEKYMNKELELEKFITHSVPFSEINKAFEYILKGEGIRCLIRMQE 238
+GN++ R+DIPS+VEKYMNKEL+LEKFITH VPFSEINKAFEY+LKGEG+RC+I M++
Sbjct: 273 FGNYKPRTDIPSVVEKYMNKELQLEKFITHKVPFSEINKAFEYMLKGEGLRCIIHMED 330
>gb|AAB65840.1| alcohol dehydrogenase gi|9885272|gb|AAG01381.1|AF194173_1 alcohol
dehydrogenase 1 [Vitis vinifera]
Length = 380
Score = 194 bits (492), Expect = 9e-49
Identities = 88/116 (75%), Positives = 104/116 (88%)
Frame = -3
Query: 588 G*VDRAIECTGNIQATISAFECLHDGWGVAVTVGVPTKDAEFKTHPIHFMEGRTLKGTFY 409
G VDR++ECTGN+ A ISAFEC+HDGWGVAV VGVP KD FKTHPI+ + RTLKGTF+
Sbjct: 264 GGVDRSLECTGNVNAMISAFECVHDGWGVAVIVGVPNKDDVFKTHPINLLNERTLKGTFF 323
Query: 408 GNFQTRSDIPSLVEKYMNKELELEKFITHSVPFSEINKAFEYILKGEGIRCLIRMQ 241
GN++ RSDIP++VEKYMNKELE+EKFITHSVPFSEINKAFEY+LKGEG+RC+I M+
Sbjct: 324 GNYKPRSDIPAVVEKYMNKELEVEKFITHSVPFSEINKAFEYMLKGEGLRCIIHME 379
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 534,432,968
Number of Sequences: 1393205
Number of extensions: 11771340
Number of successful extensions: 64922
Number of sequences better than 10.0: 635
Number of HSP's better than 10.0 without gapping: 30522
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 62468
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 22854740960
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
