Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005112A_C02 KMC005112A_c02
(1401 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P17067|CAHC_PEA CARBONIC ANHYDRASE, CHLOROPLAST PRECURSOR (CA... 559 e-158
gb|AAA33652.1| carbonic anhydrase gi|227784|prf||1710354A carbon... 555 e-157
gb|AAD27876.2|AF139464_1 carbonic anhydrase [Vigna radiata] 553 e-156
gb|AAM22683.1|AF482951_1 carbonic anhydrase [Gossypium hirsutum] 466 e-130
gb|AAD29049.1|AF132854_1 carbonic anhydrase isoform 1 [Gossypium... 462 e-129
>sp|P17067|CAHC_PEA CARBONIC ANHYDRASE, CHLOROPLAST PRECURSOR (CARBONATE DEHYDRATASE)
gi|100078|pir||S10200 carbonate dehydratase (EC 4.2.1.1)
precursor, chloroplast - garden pea
gi|20673|emb|CAA36792.1| precursor peptide (AA -104 to
224) [Pisum sativum]
Length = 328
Score = 559 bits (1441), Expect = e-158
Identities = 283/328 (86%), Positives = 306/328 (93%), Gaps = 4/328 (1%)
Frame = -3
Query: 1399 MSTSTINGFYLSSISPAKTSLKRVTLRPLVVASASSPSSSSSSSFPSLIQDRPVFAAPAP 1220
MSTS+INGF LSS+SPAKTS KR TLRP V AS ++ SSSSSS+FPSLIQD+PVFA+ +P
Sbjct: 1 MSTSSINGFSLSSLSPAKTSTKRTTLRPFVSASLNTSSSSSSSTFPSLIQDKPVFASSSP 60
Query: 1219 II-PTL--DMGKNYEEAIEELQKLLREKNELKATAAEKVEQITAQLGTTSS-DGIPSSEA 1052
II P L +MGK Y+EAIEELQKLLREK ELKATAAEKVEQITAQLGTTSS DGIP SEA
Sbjct: 61 IITPVLREEMGKGYDEAIEELQKLLREKTELKATAAEKVEQITAQLGTTSSSDGIPKSEA 120
Query: 1051 SDRIKTGFLYFKKEKYDKNPALYGELAKGQSPPYMVFACSDSRVCPSHVLDFQPGEAFVV 872
S+RIKTGFL+FKKEKYDKNPALYGELAKGQSPP+MVFACSDSRVCPSHVLDFQPGEAFVV
Sbjct: 121 SERIKTGFLHFKKEKYDKNPALYGELAKGQSPPFMVFACSDSRVCPSHVLDFQPGEAFVV 180
Query: 871 RNVANMVPPYDQAKFSGSGAAIEYAVLHLKVSNIVVIGHSACGGIKGLLSFPFDGTTSTD 692
RNVAN+VPPYDQAK++G+GAAIEYAVLHLKVSNIVVIGHSACGGIKGLLSFPFDGT STD
Sbjct: 181 RNVANLVPPYDQAKYAGTGAAIEYAVLHLKVSNIVVIGHSACGGIKGLLSFPFDGTYSTD 240
Query: 691 FIEDWVSIGLPAKAKVKAKHGDAPFGELCTHCEKEAVNVSLGNLLSYPFVREGLVNKTLA 512
FIE+WV IGLPAKAKVKA+HGDAPF ELCTHCEKEAVN SLGNLL+YPFVREGLVNKTLA
Sbjct: 241 FIEEWVKIGLPAKAKVKAQHGDAPFAELCTHCEKEAVNASLGNLLTYPFVREGLVNKTLA 300
Query: 511 LKGGYYDFVKGSFELWSLQFDLASSFSV 428
LKGGYYDFVKGSFELW L+F L+S+FSV
Sbjct: 301 LKGGYYDFVKGSFELWGLEFGLSSTFSV 328
>gb|AAA33652.1| carbonic anhydrase gi|227784|prf||1710354A carbonic anhydrase
Length = 329
Score = 555 bits (1429), Expect = e-157
Identities = 283/329 (86%), Positives = 306/329 (92%), Gaps = 5/329 (1%)
Frame = -3
Query: 1399 MSTSTINGFYLSSISPAKTSLKRVTLRPLVVASASSPSSSSSSS-FPSLIQDRPVFAAPA 1223
MSTS+INGF LSS+SPAKTS KR TLRP V AS ++ SSSSSSS FPSLIQD+PVFA+ +
Sbjct: 1 MSTSSINGFSLSSLSPAKTSTKRTTLRPFVFASLNTSSSSSSSSTFPSLIQDKPVFASSS 60
Query: 1222 PII-PTL--DMGKNYEEAIEELQKLLREKNELKATAAEKVEQITAQLGTTSS-DGIPSSE 1055
PII P L +MGK Y+EAIEELQKLLREK ELKATAAEKVEQITAQLGTTSS DGIP SE
Sbjct: 61 PIITPVLREEMGKGYDEAIEELQKLLREKTELKATAAEKVEQITAQLGTTSSSDGIPKSE 120
Query: 1054 ASDRIKTGFLYFKKEKYDKNPALYGELAKGQSPPYMVFACSDSRVCPSHVLDFQPGEAFV 875
AS+RIKTGFL+FKKEKYDKNPALYGELAKGQSPP+MVFACSDSRVCPSHVLDFQPG+AFV
Sbjct: 121 ASERIKTGFLHFKKEKYDKNPALYGELAKGQSPPFMVFACSDSRVCPSHVLDFQPGKAFV 180
Query: 874 VRNVANMVPPYDQAKFSGSGAAIEYAVLHLKVSNIVVIGHSACGGIKGLLSFPFDGTTST 695
VRNVAN+VPPYDQAK++G+GAAIEYAVLHLKVSNIVVIGHSACGGIKGLLSFPFDGT ST
Sbjct: 181 VRNVANLVPPYDQAKYAGTGAAIEYAVLHLKVSNIVVIGHSACGGIKGLLSFPFDGTYST 240
Query: 694 DFIEDWVSIGLPAKAKVKAKHGDAPFGELCTHCEKEAVNVSLGNLLSYPFVREGLVNKTL 515
DFIE+WV IGLPAKAKVKA+HGDAPF ELCTHCEKEAVN SLGNLL+YPFVREGLVNKTL
Sbjct: 241 DFIEEWVKIGLPAKAKVKAQHGDAPFAELCTHCEKEAVNASLGNLLTYPFVREGLVNKTL 300
Query: 514 ALKGGYYDFVKGSFELWSLQFDLASSFSV 428
ALKGGYYDFVKGSFELW L+F L+S+FSV
Sbjct: 301 ALKGGYYDFVKGSFELWGLEFGLSSTFSV 329
>gb|AAD27876.2|AF139464_1 carbonic anhydrase [Vigna radiata]
Length = 328
Score = 553 bits (1425), Expect = e-156
Identities = 282/328 (85%), Positives = 306/328 (92%), Gaps = 4/328 (1%)
Frame = -3
Query: 1399 MSTSTINGFYLSSISPAKTSLKRVTLRPLVVASASSPSS-SSSSSFPSLIQDRPVFAAPA 1223
MS+S+ING+ LSSISPAKTSLK+ TLRP V A+ ++PSS SSSSSFPSLIQD+PVFAAP+
Sbjct: 1 MSSSSINGWCLSSISPAKTSLKKATLRPSVFATLTTPSSPSSSSSFPSLIQDKPVFAAPS 60
Query: 1222 PII-PTL--DMGKNYEEAIEELQKLLREKNELKATAAEKVEQITAQLGTTSSDGIPSSEA 1052
II PT+ DM K+YE+AIEELQKLLREK ELKATAAEKVEQITA LGT+SSD IPSSEA
Sbjct: 61 HIITPTVREDMAKDYEQAIEELQKLLREKTELKATAAEKVEQITASLGTSSSDSIPSSEA 120
Query: 1051 SDRIKTGFLYFKKEKYDKNPALYGELAKGQSPPYMVFACSDSRVCPSHVLDFQPGEAFVV 872
SDRIK+GFLYFKKEKYDKNPALYGELAKGQSP +MVFACSDSRVCPSHVLDFQPGEAFVV
Sbjct: 121 SDRIKSGFLYFKKEKYDKNPALYGELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVV 180
Query: 871 RNVANMVPPYDQAKFSGSGAAIEYAVLHLKVSNIVVIGHSACGGIKGLLSFPFDGTTSTD 692
RNVAN+V PYDQ+K+SG+GAAIEYAVLHLKVSNIVVIGHSACGGIKGLLSFPFDGT STD
Sbjct: 181 RNVANIVAPYDQSKYSGTGAAIEYAVLHLKVSNIVVIGHSACGGIKGLLSFPFDGTYSTD 240
Query: 691 FIEDWVSIGLPAKAKVKAKHGDAPFGELCTHCEKEAVNVSLGNLLSYPFVREGLVNKTLA 512
FIE+WV IGLPAKAKVK +HGDAPF ELCTHCEKEAVNVSLGNLL+YPFVR+GLVNKTLA
Sbjct: 241 FIEEWVKIGLPAKAKVKTQHGDAPFAELCTHCEKEAVNVSLGNLLTYPFVRDGLVNKTLA 300
Query: 511 LKGGYYDFVKGSFELWSLQFDLASSFSV 428
LKGGYYDFVKG+FELWSL F LASSFSV
Sbjct: 301 LKGGYYDFVKGTFELWSLNFGLASSFSV 328
>gb|AAM22683.1|AF482951_1 carbonic anhydrase [Gossypium hirsutum]
Length = 326
Score = 466 bits (1198), Expect = e-130
Identities = 239/331 (72%), Positives = 272/331 (81%), Gaps = 7/331 (2%)
Frame = -3
Query: 1399 MSTSTINGFYLSSISPAKTSL-----KRVTLRPLVVASASSPSSSSSSSFPSLIQDRPVF 1235
MST++ING+ L+S S T+ +R TLRP VVAS +S S S P+LIQDRPVF
Sbjct: 1 MSTASINGWCLTSSSSTTTTSSFSARRRPTLRPSVVASLNS-----SPSPPTLIQDRPVF 55
Query: 1234 AAPAPII-PTLDMG-KNYEEAIEELQKLLREKNELKATAAEKVEQITAQLGTTSSDGIPS 1061
AAP P++ P +MG K+Y+EAIE L+KLL EK ELKA AA +V+QITA+L T S+DG PS
Sbjct: 56 AAPIPLLTPREEMGNKSYDEAIEALKKLLSEKGELKAEAAARVDQITAELNTASADGKPS 115
Query: 1060 SEASDRIKTGFLYFKKEKYDKNPALYGELAKGQSPPYMVFACSDSRVCPSHVLDFQPGEA 881
+ +R+K GF+YFKKEKY+KNPALYGELAKGQSP YM+ ACSDSRVCPSHVLD QPGEA
Sbjct: 116 DSSVERLKEGFVYFKKEKYEKNPALYGELAKGQSPKYMIVACSDSRVCPSHVLDMQPGEA 175
Query: 880 FVVRNVANMVPPYDQAKFSGSGAAIEYAVLHLKVSNIVVIGHSACGGIKGLLSFPFDGTT 701
FVVRNVANMVPPYDQ K++G G+AIEYAVLHLKV IVVIGHSACGGIKGL+SFPFDG
Sbjct: 176 FVVRNVANMVPPYDQIKYAGIGSAIEYAVLHLKVQEIVVIGHSACGGIKGLMSFPFDGNN 235
Query: 700 STDFIEDWVSIGLPAKAKVKAKHGDAPFGELCTHCEKEAVNVSLGNLLSYPFVREGLVNK 521
STDFIEDWV IG+PAK KV A+HG P G CTHCEKEAVNVSLGNLLSYPFVR+GLV K
Sbjct: 236 STDFIEDWVKIGIPAKTKVLAEHGGEPLGVQCTHCEKEAVNVSLGNLLSYPFVRDGLVKK 295
Query: 520 TLALKGGYYDFVKGSFELWSLQFDLASSFSV 428
TL +KGGYYDFVKGSFELWSLQF L+SS SV
Sbjct: 296 TLGIKGGYYDFVKGSFELWSLQFQLSSSLSV 326
>gb|AAD29049.1|AF132854_1 carbonic anhydrase isoform 1 [Gossypium hirsutum]
Length = 322
Score = 462 bits (1188), Expect = e-129
Identities = 237/327 (72%), Positives = 270/327 (82%), Gaps = 7/327 (2%)
Frame = -3
Query: 1387 TINGFYLSSISPAKTSL-----KRVTLRPLVVASASSPSSSSSSSFPSLIQDRPVFAAPA 1223
+ING+ L+S S + T+ +R TLRP VVAS +S S S P+LIQDRPVFAAP
Sbjct: 1 SINGWCLTSSSSSTTTSSFSARRRPTLRPSVVASLNS-----SPSPPTLIQDRPVFAAPV 55
Query: 1222 PII-PTLDMG-KNYEEAIEELQKLLREKNELKATAAEKVEQITAQLGTTSSDGIPSSEAS 1049
P++ P +MG K+Y+EAIE L+KLL EK ELKA AA +V+QITA+L TTS+DG PS +
Sbjct: 56 PLLTPREEMGNKSYDEAIEALKKLLSEKGELKAEAAARVDQITAELNTTSADGKPSDSSV 115
Query: 1048 DRIKTGFLYFKKEKYDKNPALYGELAKGQSPPYMVFACSDSRVCPSHVLDFQPGEAFVVR 869
+R+K GF+YFKKEKY+KNPALYGELAKGQSP YM+ ACSDSRVCPSHVLD QPGEAFVVR
Sbjct: 116 ERLKEGFVYFKKEKYEKNPALYGELAKGQSPKYMIVACSDSRVCPSHVLDMQPGEAFVVR 175
Query: 868 NVANMVPPYDQAKFSGSGAAIEYAVLHLKVSNIVVIGHSACGGIKGLLSFPFDGTTSTDF 689
NVANMVPPYDQ K++G G+AIEYAVLHLKV IVVIGHSACGGIKGL+SFP DG STDF
Sbjct: 176 NVANMVPPYDQIKYAGIGSAIEYAVLHLKVQEIVVIGHSACGGIKGLMSFPLDGNNSTDF 235
Query: 688 IEDWVSIGLPAKAKVKAKHGDAPFGELCTHCEKEAVNVSLGNLLSYPFVREGLVNKTLAL 509
IEDWV IG+PAKAKV A+HG P G CTHCEKEAVNVSLGNLLSYPFVR+GLV KTL +
Sbjct: 236 IEDWVKIGIPAKAKVLAEHGGEPLGVQCTHCEKEAVNVSLGNLLSYPFVRDGLVKKTLGI 295
Query: 508 KGGYYDFVKGSFELWSLQFDLASSFSV 428
KGGYYDFVKGSFELWSLQF L+SS SV
Sbjct: 296 KGGYYDFVKGSFELWSLQFQLSSSLSV 322
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,278,704,203
Number of Sequences: 1393205
Number of extensions: 30826840
Number of successful extensions: 138640
Number of sequences better than 10.0: 247
Number of HSP's better than 10.0 without gapping: 99208
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 126695
length of database: 448,689,247
effective HSP length: 127
effective length of database: 271,752,212
effective search space used: 92123999868
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
