Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005099A_C01 KMC005099A_c01
(532 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAL76058.1|AF467554_1 seed coat BURP domain protein 1 [Glycin... 99 4e-20
dbj|BAC22501.1| resistant specific protein-3 [Vigna radiata] 88 6e-17
dbj|BAC22498.1| resistant specific protein-1(4) [Vigna radiata] ... 79 4e-14
dbj|BAC22500.1| resistant specific protein-2 [Vigna radiata] 75 4e-13
dbj|BAB60847.1| BURP domain-containing protein [Bruguiera gymnor... 71 7e-12
>gb|AAL76058.1|AF467554_1 seed coat BURP domain protein 1 [Glycine max]
gi|20086223|gb|AAM03361.1| seed coat BURP domain protein
1 [Glycine max]
Length = 305
Score = 98.6 bits (244), Expect = 4e-20
Identities = 65/179 (36%), Positives = 91/179 (50%), Gaps = 10/179 (5%)
Frame = +2
Query: 23 MESHWFLVCFLSSLMVMTAQVALPAELDWKRKLPASPVPKAITELWRGDVNTGKSVDTDT 202
ME H + +LM+MTA AL W+ LP +P+PKAITEL
Sbjct: 1 MEFHCLPIFLYLNLMLMTANAALTPRHYWETMLPRTPLPKAITEL--------------L 46
Query: 203 QLQDELVISESGAKEIPSQENALLFYAYYVAKETQ---------SRSFFEEYQLHAGNKF 355
L+ + +G + S+ ++L YA Y E +R FF E L AG F
Sbjct: 47 SLESRSIFEYAGNDD-QSESRSILGYAGYNQDEDDVSKHNIQIFNRLFFLEEDLRAGKIF 105
Query: 356 NVN-LNKIKSVVPWLPREIADHIPFSLDKMNEILEMLSVKLESKNAEIVEKTIGDCESP 529
N+ +N K+ VP LPR+I+ IPFS DK ++L ML V+ S NA+I+ +TIG C+ P
Sbjct: 106 NMKFVNNTKATVPLLPRQISKQIPFSEDKKKQVLAMLGVEANSSNAKIIAETIGLCQEP 164
>dbj|BAC22501.1| resistant specific protein-3 [Vigna radiata]
Length = 275
Score = 88.2 bits (217), Expect = 6e-17
Identities = 57/169 (33%), Positives = 83/169 (48%)
Frame = +2
Query: 23 MESHWFLVCFLSSLMVMTAQVALPAELDWKRKLPASPVPKAITELWRGDVNTGKSVDTDT 202
ME + F +++M AQ ALP E+ W+R LP +P+PK I +
Sbjct: 1 MEFQCLALFFSLIVILMAAQAALPPEVYWERMLPNTPIPKVIRQF--------------- 45
Query: 203 QLQDELVISESGAKEIPSQENALLFYAYYVAKETQSRSFFEEYQLHAGNKFNVNLNKIKS 382
SE G ++ + +FF E +L G K +V K
Sbjct: 46 --------SELGP-----------IVNHHHHDHLKPSNFFSEERLRRGAKLDVLFRKRNF 86
Query: 383 VVPWLPREIADHIPFSLDKMNEILEMLSVKLESKNAEIVEKTIGDCESP 529
P L REIA+H+PFS +K+NEILE+L+VK +SK+A+ VE+T+ CE P
Sbjct: 87 STPLLTREIAEHLPFSSEKINEILEILAVKPDSKDAKNVEETLNHCEKP 135
>dbj|BAC22498.1| resistant specific protein-1(4) [Vigna radiata]
gi|24416616|dbj|BAC22499.1| resistant specific
protein-1(8) [Vigna radiata]
Length = 402
Score = 78.6 bits (192), Expect = 4e-14
Identities = 45/112 (40%), Positives = 61/112 (54%), Gaps = 19/112 (16%)
Frame = +2
Query: 251 PSQENALLFYAYYVAKET-------------------QSRSFFEEYQLHAGNKFNVNLNK 373
P ENALL Y Y K+ + +FF E +L G K +V K
Sbjct: 151 PEDENALLLYTKYANKKNGVVLRRIGPIVNHHHHDHLKPSNFFSEERLRRGAKLDVLFRK 210
Query: 374 IKSVVPWLPREIADHIPFSLDKMNEILEMLSVKLESKNAEIVEKTIGDCESP 529
P L REIA+H+PFS +K+NEILE+L+VK +SK+A+ VE+T+ CE P
Sbjct: 211 RNFSTPLLTREIAEHLPFSSEKINEILEILAVKPDSKDAKNVEETLNHCEKP 262
Score = 49.3 bits (116), Expect = 3e-05
Identities = 34/119 (28%), Positives = 55/119 (45%), Gaps = 24/119 (20%)
Frame = +2
Query: 23 MESHWFLVCFLSSLMVMTAQVALPAELDWKRKLPASPVPKAITELWRGDVNTGKSVDTDT 202
ME + F +++M AQ ALP E+ W+R LP +P+PK I + +++ G+ + +
Sbjct: 1 MEFQCLALFFSLIVILMAAQAALPPEVYWERMLPNTPIPKVIRQF--SELDGGQEIAS-- 56
Query: 203 QLQDELVISESGAKE------------------------IPSQENALLFYAYYVAKETQ 307
+DE ++ SG K+ P ENALLFY Y K+ +
Sbjct: 57 --KDEFLLFGSGDKKNKDKLFHFGCGDKKNELQDDVKDISPEDENALLFYTKYANKKNE 113
>dbj|BAC22500.1| resistant specific protein-2 [Vigna radiata]
Length = 440
Score = 75.5 bits (184), Expect = 4e-13
Identities = 38/72 (52%), Positives = 51/72 (70%)
Frame = +2
Query: 314 SFFEEYQLHAGNKFNVNLNKIKSVVPWLPREIADHIPFSLDKMNEILEMLSVKLESKNAE 493
S+F E L G K + +K K P L REIA+H+PFS +K+NEILE+L+VK +SKNA+
Sbjct: 229 SYFSEEGLRRGAKLVMLFHKRKFSTPLLTREIAEHLPFSSEKINEILEILAVKPDSKNAK 288
Query: 494 IVEKTIGDCESP 529
VEKT+ +CE P
Sbjct: 289 NVEKTLNNCEEP 300
Score = 49.7 bits (117), Expect = 2e-05
Identities = 41/147 (27%), Positives = 64/147 (42%), Gaps = 29/147 (19%)
Frame = +2
Query: 23 MESHWFLVCFLSSLMVMTAQVALPAELDWKRKLPASPVPKAITELWRGDVNTGKSVDT-- 196
ME + F +++M AQ +LP+E+ W+RKLP +P+PK I + + D GK + +
Sbjct: 1 MEFQCLALFFSLIVILMAAQASLPSEVYWERKLPNTPIPKVIRQFSKQD--GGKDIASKD 58
Query: 197 --------DTQLQDELVISESGAKE----------IPSQENALLFYAYYVAKETQ----- 307
D + +D+L+ G KE P EN LL Y Y + Q
Sbjct: 59 EFLLFGSGDKKNKDKLLRFGCGDKENKLQDDVQDISPEDENLLLIYDRYAKNKLQDDLQD 118
Query: 308 ----SRSFFEEYQLHAGNKFNVNLNKI 376
+F Y +A NK ++ I
Sbjct: 119 ISPEDENFLLFYDRYAKNKLQDDVQDI 145
>dbj|BAB60847.1| BURP domain-containing protein [Bruguiera gymnorrhiza]
Length = 292
Score = 71.2 bits (173), Expect = 7e-12
Identities = 52/165 (31%), Positives = 74/165 (44%), Gaps = 6/165 (3%)
Frame = +2
Query: 53 LSSLMVMTAQVALPAELDWKRKLPASPVPKAITELWRGDVNTGKSVDTDTQLQDELVISE 232
L L ++ + AL E W LP +P+PKAI L D+ L+D+
Sbjct: 2 LLMLALVASDAALAPEAYWNSVLPNTPMPKAIKVLLHPDM-----------LEDKGTSVA 50
Query: 233 SGAKEIPSQENALLFYAYYVAKETQSRS------FFEEYQLHAGNKFNVNLNKIKSVVPW 394
G + + + Y Y A E Q R FF E L G N+ + + +
Sbjct: 51 VGKGAVNVDAGSFINY-YNAASEDQIRDNSNITIFFLEKDLKPGKSMNLYFFESSNTATF 109
Query: 395 LPREIADHIPFSLDKMNEILEMLSVKLESKNAEIVEKTIGDCESP 529
LPR +AD +PFS +K+ E SVK S AE +E TI +CE+P
Sbjct: 110 LPRHVADSMPFSSNKLQEAFREFSVKPGSLEAETMEDTIKECENP 154
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 430,819,433
Number of Sequences: 1393205
Number of extensions: 8403994
Number of successful extensions: 23286
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 22706
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23276
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 17596710992
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
