Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005068A_C01 KMC005068A_c01
(513 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD55280.1|AC008263_11 Similar to gb|AF060519 3-ketoacyl-ACP ... 36 0.23
gb|AAF61739.1|AF244520_1 beta-ketoacyl-ACP synthetase 2 [Brassic... 36 0.23
gb|AAL91174.1| putative 3-ketoacyl-ACP synthase [Arabidopsis tha... 36 0.23
ref|NP_565097.1| 3-ketoacyl-ACP synthase, putative; protein id: ... 36 0.23
pir||T10055 probable 3-oxoacyl-[acyl-carrier-protein] synthase (... 36 0.23
>gb|AAD55280.1|AC008263_11 Similar to gb|AF060519 3-ketoacyl-ACP synthase (Kas4) from Cuphea
hookeriana. [Arabidopsis thaliana]
Length = 562
Score = 36.2 bits (82), Expect = 0.23
Identities = 15/17 (88%), Positives = 16/17 (93%)
Frame = -2
Query: 512 SFAFGGHDSSIIFAPYK 462
SF FGGH+SSIIFAPYK
Sbjct: 546 SFGFGGHNSSIIFAPYK 562
>gb|AAF61739.1|AF244520_1 beta-ketoacyl-ACP synthetase 2 [Brassica napus]
Length = 433
Score = 36.2 bits (82), Expect = 0.23
Identities = 15/17 (88%), Positives = 16/17 (93%)
Frame = -2
Query: 512 SFAFGGHDSSIIFAPYK 462
SF FGGH+SSIIFAPYK
Sbjct: 417 SFGFGGHNSSIIFAPYK 433
>gb|AAL91174.1| putative 3-ketoacyl-ACP synthase [Arabidopsis thaliana]
Length = 541
Score = 36.2 bits (82), Expect = 0.23
Identities = 15/17 (88%), Positives = 16/17 (93%)
Frame = -2
Query: 512 SFAFGGHDSSIIFAPYK 462
SF FGGH+SSIIFAPYK
Sbjct: 525 SFGFGGHNSSIIFAPYK 541
>ref|NP_565097.1| 3-ketoacyl-ACP synthase, putative; protein id: At1g74960.1,
supported by cDNA: gi_14582700, supported by cDNA:
gi_15724209, supported by cDNA: gi_15809857, supported
by cDNA: gi_16930488, supported by cDNA: gi_19698876,
supported by cDNA: gi_20453242 [Arabidopsis thaliana]
gi|25286624|pir||D96779 probable 3-ketoacyl-ACP synthase
F9E10.19 [imported] - Arabidopsis thaliana
gi|12323894|gb|AAG51920.1|AC013258_14 putative
3-ketoacyl-ACP synthase; 47419-50803 [Arabidopsis
thaliana] gi|14582701|gb|AAK69603.1|AF318307_1
beta-ketoacyl-ACP synthetase 2 [Arabidopsis thaliana]
gi|15809858|gb|AAL06857.1| At1g74960/F9E10_19
[Arabidopsis thaliana]
gi|16930489|gb|AAL31930.1|AF419598_1 At1g74960/F9E10_19
[Arabidopsis thaliana] gi|20453243|gb|AAM19860.1|
At1g74960/F9E10_19 [Arabidopsis thaliana]
Length = 541
Score = 36.2 bits (82), Expect = 0.23
Identities = 15/17 (88%), Positives = 16/17 (93%)
Frame = -2
Query: 512 SFAFGGHDSSIIFAPYK 462
SF FGGH+SSIIFAPYK
Sbjct: 525 SFGFGGHNSSIIFAPYK 541
>pir||T10055 probable 3-oxoacyl-[acyl-carrier-protein] synthase (EC 2.3.1.41)
precursor, chloroplast - castor bean
gi|294666|gb|AAA33872.1| beta-ketoacyl-ACP synthase
Length = 535
Score = 36.2 bits (82), Expect = 0.23
Identities = 15/17 (88%), Positives = 16/17 (93%)
Frame = -2
Query: 512 SFAFGGHDSSIIFAPYK 462
SF FGGH+SSIIFAPYK
Sbjct: 519 SFGFGGHNSSIIFAPYK 535
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 454,805,874
Number of Sequences: 1393205
Number of extensions: 9794093
Number of successful extensions: 17552
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 17242
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17548
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 16232377112
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
