Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005058A_C01 KMC005058A_c01
(904 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAC54827.1| vacuolar processing enzyme-1a [Nicotiana tabacum] 332 6e-90
dbj|BAC54828.1| vacuolar processing enzyme-1b [Nicotiana tabacum] 331 8e-90
dbj|BAC54829.1| vacuolar processing enzyme-2 [Nicotiana tabacum] 330 2e-89
dbj|BAA84650.1| asparaginyl endopeptidase [Oryza sativa] gi|1884... 327 1e-88
emb|CAB64544.1| legumain-like protease [Zea mays] 324 1e-87
>dbj|BAC54827.1| vacuolar processing enzyme-1a [Nicotiana tabacum]
Length = 490
Score = 332 bits (850), Expect = 6e-90
Identities = 156/254 (61%), Positives = 197/254 (77%), Gaps = 8/254 (3%)
Frame = +3
Query: 165 VTGDHQSSTEGKRWALLVAGSYGYGNYRHQADVCHAYQILKKGGLPDENIIVFMYDDIAN 344
V DH + G RWA+L+AGS GY NYRHQAD+CHAYQ+LKKGGL DENI+VFMYDDIAN
Sbjct: 44 VGDDHDDDSVGTRWAILLAGSNGYWNYRHQADICHAYQLLKKGGLKDENIVVFMYDDIAN 103
Query: 345 NKENKWPGKIFNKRNGPNVYEGVPKDYTGDAVSVKNFFAVLSGNKSATTGGSGKVLDSGP 524
N+EN PG I N +G +VY+GVPKDYTGD V+V NFFA L GNK+A +GGSGKV++SGP
Sbjct: 104 NEENPRPGVIINSPHGEDVYKGVPKDYTGDDVTVNNFFAALLGNKTALSGGSGKVVNSGP 163
Query: 525 DDIVFIYYTDHGNTGIIGM-LDDMITADELVDALKKKHAANSYKKMVIYLEACESGSMCE 701
+D + I+Y+DHG G++GM D + A++L+D LKKKHA+ +YK +V YLEACESGS+ E
Sbjct: 164 NDHILIFYSDHGGPGVLGMPTDPYLYANDLIDVLKKKHASGTYKSLVFYLEACESGSIFE 223
Query: 702 GLLPDDINIYATTAANAEEDSWACYCYE-------DYNACVGDLYSVSWMEDSDKHDSTK 860
GLLP+ +NIYATTA+NAEE SW YC +Y C+GDLYS+SWMEDS+ H+
Sbjct: 224 GLLPEGLNIYATTASNAEESSWGTYCPGEYPSPPIEYETCLGDLYSISWMEDSELHNLRT 283
Query: 861 ETLEKQYEHVRKRT 902
E+L++QY VR+RT
Sbjct: 284 ESLKQQYHLVRERT 297
>dbj|BAC54828.1| vacuolar processing enzyme-1b [Nicotiana tabacum]
Length = 489
Score = 331 bits (849), Expect = 8e-90
Identities = 155/252 (61%), Positives = 199/252 (78%), Gaps = 8/252 (3%)
Frame = +3
Query: 171 GDHQSSTEGKRWALLVAGSYGYGNYRHQADVCHAYQILKKGGLPDENIIVFMYDDIANNK 350
GDH + G RWA+L+AGS GY NYRHQAD+CHAYQ+LKKGGL DENI+VFMYDDIANN+
Sbjct: 45 GDHDDDSVGTRWAILLAGSNGYWNYRHQADICHAYQLLKKGGLKDENIVVFMYDDIANNE 104
Query: 351 ENKWPGKIFNKRNGPNVYEGVPKDYTGDAVSVKNFFAVLSGNKSATTGGSGKVLDSGPDD 530
EN G I N +G +VY+GVPKDYTGD V+V NFFAV+ GNK+A +GGSGKV++SGP+D
Sbjct: 105 ENPRRGVIINSPHGEDVYKGVPKDYTGDDVTVDNFFAVILGNKTALSGGSGKVVNSGPND 164
Query: 531 IVFIYYTDHGNTGIIGM-LDDMITADELVDALKKKHAANSYKKMVIYLEACESGSMCEGL 707
+FI+Y+DHG G++GM D + A++L+D LKKKHA+ +YK +V YLEACESGS+ EGL
Sbjct: 165 HIFIFYSDHGGPGVLGMPTDPYLYANDLIDVLKKKHASGTYKSLVFYLEACESGSIFEGL 224
Query: 708 LPDDINIYATTAANAEEDSWACYCYEDYNA-------CVGDLYSVSWMEDSDKHDSTKET 866
LP+ +NIYATTA+NAEE SW YC +Y + C+GDLYS+SWMEDS+ H+ E+
Sbjct: 225 LPEGLNIYATTASNAEESSWGTYCPGEYPSPPIEYMTCLGDLYSISWMEDSELHNLRTES 284
Query: 867 LEKQYEHVRKRT 902
L++QY V++RT
Sbjct: 285 LKQQYHLVKERT 296
>dbj|BAC54829.1| vacuolar processing enzyme-2 [Nicotiana tabacum]
Length = 484
Score = 330 bits (845), Expect = 2e-89
Identities = 156/253 (61%), Positives = 197/253 (77%), Gaps = 8/253 (3%)
Frame = +3
Query: 168 TGDHQSSTEGKRWALLVAGSYGYGNYRHQADVCHAYQILKKGGLPDENIIVFMYDDIANN 347
+G++ + G +WA+LVAGS GY NYRHQADVCHAYQ+LKKGGL DENIIVFMYDDIA+N
Sbjct: 38 SGNYDDDSIGTKWAVLVAGSRGYWNYRHQADVCHAYQLLKKGGLKDENIIVFMYDDIAHN 97
Query: 348 KENKWPGKIFNKRNGPNVYEGVPKDYTGDAVSVKNFFAVLSGNKSATTGGSGKVLDSGPD 527
EN PG I N NG +VY+GVPKDYTG V+ NF AV+ GNK+A +GGSGKV++SGP+
Sbjct: 98 FENPRPGVIINSPNGDDVYKGVPKDYTGHHVTANNFLAVILGNKAALSGGSGKVVESGPN 157
Query: 528 DIVFIYYTDHGNTGIIGM-LDDMITADELVDALKKKHAANSYKKMVIYLEACESGSMCEG 704
D +FI+Y+DHG G++GM + AD+L+D LK+KHA+ +YK +V Y+EACESGS+ EG
Sbjct: 158 DHIFIFYSDHGGPGVLGMPSGPYLYADDLIDVLKRKHASGTYKSLVFYIEACESGSIFEG 217
Query: 705 LLPDDINIYATTAANAEEDSWACYCYED-------YNACVGDLYSVSWMEDSDKHDSTKE 863
LLP+ +NIYATTA+NAEEDSW YC D Y C+GDLY+VSWMEDS+KH+ +E
Sbjct: 218 LLPEGLNIYATTASNAEEDSWGTYCPGDYPGPPPEYQTCLGDLYAVSWMEDSEKHNLRRE 277
Query: 864 TLEKQYEHVRKRT 902
TL QYE V++RT
Sbjct: 278 TLGMQYELVKRRT 290
>dbj|BAA84650.1| asparaginyl endopeptidase [Oryza sativa]
gi|18844931|dbj|BAB85400.1| asparaginyl endopeptidase
[Oryza sativa (japonica cultivar-group)]
Length = 501
Score = 327 bits (839), Expect = 1e-88
Identities = 159/255 (62%), Positives = 193/255 (75%), Gaps = 8/255 (3%)
Frame = +3
Query: 162 AVTGDHQSSTEGKRWALLVAGSYGYGNYRHQADVCHAYQILKKGGLPDENIIVFMYDDIA 341
A D + EG RWA+L+AGS GY NYRHQADVCHAYQI+K+GGL DENIIVFMYDDIA
Sbjct: 52 AAADDAAEAAEGTRWAVLIAGSNGYYNYRHQADVCHAYQIMKRGGLKDENIIVFMYDDIA 111
Query: 342 NNKENKWPGKIFNKRNGPNVYEGVPKDYTGDAVSVKNFFAVLSGNKSATTGGSGKVLDSG 521
+N EN PG I N G +VY GVPKDYTG V+VKN FAVL GNK+A GGSGKVLDSG
Sbjct: 112 HNPENPRPGVIINHPQGGDVYAGVPKDYTGKEVNVKNLFAVLLGNKTAVKGGSGKVLDSG 171
Query: 522 PDDIVFIYYTDHGNTGIIGM-LDDMITADELVDALKKKHAANSYKKMVIYLEACESGSMC 698
P+D +FI+Y+DHG G++GM + D+LVD LKKKHAA +YK +V YLEACESGS+
Sbjct: 172 PNDHIFIFYSDHGGPGVLGMPTYPYLYGDDLVDVLKKKHAAGTYKSLVFYLEACESGSIF 231
Query: 699 EGLLPDDINIYATTAANAEEDSWACYC-------YEDYNACVGDLYSVSWMEDSDKHDST 857
EGLLP+ IN+YATTA+NA+E SW YC +Y+ C+GDLYSV+WMEDSD H+
Sbjct: 232 EGLLPNGINVYATTASNADESSWGTYCPGEYPSPPPEYDTCLGDLYSVAWMEDSDVHNLR 291
Query: 858 KETLEKQYEHVRKRT 902
E+L++QY V++RT
Sbjct: 292 TESLKQQYNLVKERT 306
>emb|CAB64544.1| legumain-like protease [Zea mays]
Length = 486
Score = 324 bits (831), Expect = 1e-87
Identities = 157/255 (61%), Positives = 192/255 (74%), Gaps = 8/255 (3%)
Frame = +3
Query: 162 AVTGDHQSSTEGKRWALLVAGSYGYGNYRHQADVCHAYQILKKGGLPDENIIVFMYDDIA 341
A + G RWA+L+AGS GY NYRHQAD+CHAYQI+KKGGL DENIIVFMYDDIA
Sbjct: 37 AAADETDDGAVGTRWAVLIAGSSGYYNYRHQADICHAYQIMKKGGLKDENIIVFMYDDIA 96
Query: 342 NNKENKWPGKIFNKRNGPNVYEGVPKDYTGDAVSVKNFFAVLSGNKSATTGGSGKVLDSG 521
++ EN PG I N G +VY GVPKDYTG V+V NFFAVL GNK+A GGSGKV+DSG
Sbjct: 97 HSPENPRPGVIINHPQGGDVYAGVPKDYTGRDVNVDNFFAVLLGNKTALRGGSGKVVDSG 156
Query: 522 PDDIVFIYYTDHGNTGIIGM-LDDMITADELVDALKKKHAANSYKKMVIYLEACESGSMC 698
PDD +F++Y+DHG G++GM + D+LVD LKKKHAA +YK +V YLEACESGS+
Sbjct: 157 PDDHIFVFYSDHGGPGVLGMPTYPYLYGDDLVDVLKKKHAAGTYKSLVFYLEACESGSIF 216
Query: 699 EGLLPDDINIYATTAANAEEDSWACYC-------YEDYNACVGDLYSVSWMEDSDKHDST 857
EGLLP+DIN+YATTA+NAEE SW YC +Y+ C+GDLYSV+WMEDSD H+
Sbjct: 217 EGLLPNDINVYATTASNAEESSWGTYCPGEFPSPPPEYDTCLGDLYSVAWMEDSDFHNLR 276
Query: 858 KETLEKQYEHVRKRT 902
E+L++QY+ V+ RT
Sbjct: 277 TESLKQQYKLVKDRT 291
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 863,186,899
Number of Sequences: 1393205
Number of extensions: 21032746
Number of successful extensions: 61822
Number of sequences better than 10.0: 107
Number of HSP's better than 10.0 without gapping: 57427
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 61331
length of database: 448,689,247
effective HSP length: 123
effective length of database: 277,325,032
effective search space used: 49086530664
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
