KMC005055A_c02
[Fasta Sequence]
[Nr Search]
[EST assemble image]
Fasta Sequence
>KMC005055A_C02 KMC005055A_c02
ATTGGTAAATATTTATATACTTTAATTATGCATAATACATAAAAAAAAATAAAAAATGGA
AACCTCATGAAAAGTGAAAAGTCGACAATATATAAACCCAACTTATTACATTCTTACATG
TACGTATACACATGAAGCAACATCAAGGAAATAAACATTCTCCACACCACTCAAAGTAAT
AAAACTGAAAGATGAATAAAGATAAGACAGATCGATAATTAAGCCAGAAGCATATAATAG
AAGACGAAGCTAAGTAGAATAATTATTGATGATGGTACGTGCTTCTGCATGTGCTTAATT
ATATATGCATACACGCGCTCTCGATCGATCAGTCTCGGCCAAACAAATGGTGGTGCTTCT
TTCCATGAGATTCCTCTTCTTCCTCTTTGGCTTCCTTTTTCTCATGATGCTCATGAAAGG
CGAATCCACCAGCTCCCACTGCAGCTGCTGCTGCAACCTCCTCTTCTAACTTGTGCCTGT
GAGCGTTCTCTGGATCTTTCTCTGACTTGTGCTTCTCATGCAAGGCATAAGCACCAGCAG
CTGTGGTGCCTAATTCACCAAGGTGCTCAAGCTTCTTGTGGTGCTTCTCCTCCTCCTTAT
AATCAACCTCATCACGTCGGTTACCAGAATCATCATTGCCATAGCCACCACCACCAGTGG
AGTATCCTCCACCACCACCACCGGTAGAATATTCGCCACCACCTCCACCACCAGTGCCAT
AGCCTCCACCTGTGGAGTATCCACCACCAGCGCCACCAGTGCCATAACCGCCACCAGAAG
GCTCATCAGTGGAGTAAGCTGTTTTGTTGTATCCAGAGTCATAGCCGCCACCACCAGAAT
TAGGCTCATCAGTAGAGTATGATGATGTCTTGTTGTAACCAGTTTCATAACCACCACCAG
AAGTCTCATATGAGGATTTTTTGTAACCAGAGTCATAGTCACCACCAGAAGGTTCATCAG
TGGAGTATGATGTTTTGTTGTAGCCAGTCTCAGTATCTGTGGGCCTATCCTCATTCTTAT
GGTGGTGGAAGAGGCCACGGTCGCGATTCTCTTCAGCCATGGTGATTGCAAGGGGAAGAT
TAGATGAATTGAATCA
Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005055A_C02 KMC005055A_c02
(1096 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAB97140.1| abscisic stress ripening protein homolog [Prunus ... 234 2e-60
gb|AAL26889.1|AF317062_1 abscisic stress ripening-like protein [... 227 3e-58
emb|CAC86102.2| DS2 protein [Solanum tuberosum] 211 2e-53
pir||S53488 water-stress-inducible protein DS2 - Chaco potato gi... 209 6e-53
dbj|BAB19963.1| putative ripening protein [Calystegia soldanella] 190 3e-47
>gb|AAB97140.1| abscisic stress ripening protein homolog [Prunus armeniaca]
Length = 200
Score = 234 bits (597), Expect = 2e-60
Identities = 130/242 (53%), Positives = 146/242 (59%), Gaps = 2/242 (0%)
Frame = -1
Query: 1060 MAEENRDRGLFHHHKNEDRPTDTETGYNKTSYSTDEPSGGDY-DSGYKKSSYETSGGGYE 884
M+EE GLFHHHK+EDRP +T +D P G Y D G S Y GGGY
Sbjct: 1 MSEEKHHHGLFHHHKDEDRPIET----------SDYPQSGGYSDEGRTGSGYGGGGGGY- 49
Query: 883 TGYNKTSSYSTDEPNSGGGGYDSGYNKTAYSTDEPSGGGYGTGGAGGGYS-TGGGYGTGG 707
GGGGY G GGGYG A G G GYG GG
Sbjct: 50 ---------------GGGGGYGDG------------GGGYGDNTAYSGEGRPGSGYG-GG 81
Query: 706 GGGGEYSTGGGGGGYSTGGGGYGNDDSGNRRDEVDYKEEEKHHKKLEHLGELGTTAAGAY 527
GG GE + GG Y YG +G E+DYK+EEKHHK LEHL E G AAG +
Sbjct: 82 GGYGESADYSDGGRYKE-TAAYGT--TGTNESEIDYKKEEKHHKHLEHLSEPGAAAAGVF 138
Query: 526 ALHEKHKSEKDPENAHRHKLEEEVAAAAAVGAGGFAFHEHHEKKEAKEEEEESHGKKHHH 347
ALHEKH+S+KDPE+AH+HK+EEE+AAAAAVG+GGFAFHEHHEKKEAKEEEEESHGKKHHH
Sbjct: 139 ALHEKHESKKDPEHAHKHKIEEEIAAAAAVGSGGFAFHEHHEKKEAKEEEEESHGKKHHH 198
Query: 346 LF 341
LF
Sbjct: 199 LF 200
>gb|AAL26889.1|AF317062_1 abscisic stress ripening-like protein [Prunus persica]
Length = 193
Score = 227 bits (578), Expect = 3e-58
Identities = 124/240 (51%), Positives = 142/240 (58%)
Frame = -1
Query: 1060 MAEENRDRGLFHHHKNEDRPTDTETGYNKTSYSTDEPSGGDYDSGYKKSSYETSGGGYET 881
M+EE GLFHHHK+EDRP +T +D P G Y + S GGGY
Sbjct: 1 MSEEKHHHGLFHHHKDEDRPIET----------SDYPQSGGYSDEGRTGSGYGGGGGY-- 48
Query: 880 GYNKTSSYSTDEPNSGGGGYDSGYNKTAYSTDEPSGGGYGTGGAGGGYSTGGGYGTGGGG 701
GGGGY + TAYS + G GYG GGGG
Sbjct: 49 -------------GDGGGGYG---DNTAYSGEGRPGSGYG----------------GGGG 76
Query: 700 GGEYSTGGGGGGYSTGGGGYGNDDSGNRRDEVDYKEEEKHHKKLEHLGELGTTAAGAYAL 521
GE + GG Y YG +G E+DYK+EEKHHK LEHL E G AAG +AL
Sbjct: 77 YGESADYSDGGRYKE-TAAYGT--TGTHESEIDYKKEEKHHKHLEHLSEAGAAAAGVFAL 133
Query: 520 HEKHKSEKDPENAHRHKLEEEVAAAAAVGAGGFAFHEHHEKKEAKEEEEESHGKKHHHLF 341
HEKH+S+KDPE+AHRHK+EEE+AAAAAVG+GGFAFHEHHEKKEAKEEEEESHGKKHHHLF
Sbjct: 134 HEKHESKKDPEHAHRHKIEEEIAAAAAVGSGGFAFHEHHEKKEAKEEEEESHGKKHHHLF 193
>emb|CAC86102.2| DS2 protein [Solanum tuberosum]
Length = 268
Score = 211 bits (536), Expect = 2e-53
Identities = 128/268 (47%), Positives = 156/268 (57%), Gaps = 28/268 (10%)
Frame = -1
Query: 1060 MAEENRDR--GLFHHHKNEDRPTDTE-TGYNKTSYSTDEP--------SGGDYDSGYKKS 914
MAE+ + GLFHHHKNE+ T E T Y +T+Y E S GD G K +
Sbjct: 1 MAEQKKHHFGGLFHHHKNEEEDTPVEKTTYEETTYGESEKTRTYGEKTSYGDDTYGEKTT 60
Query: 913 SY-------ETSGGGYETGYNKTSSYSTD----EPNSGGGGYDSGYN-KTAYSTDEPSGG 770
++ E + G +T K +SY D E S G G D+ Y KT+Y + +
Sbjct: 61 TFGDDNKYGEKTSYGDDTYGEKPTSYGGDNTYGEKTSYGEGDDNKYGEKTSYGEGDDNQY 120
Query: 769 GYGTGGAGGGYSTGGGYGTGGGG--GGEYSTGGGGGGYSTGGG---GYGNDDSGNRRDEV 605
G T GY YG G G + S G GGY G G Y ++S + E
Sbjct: 121 GEKTSYGDSGYGEKPSYGGGDDNKYGEKTSYGNEEGGYGGGVGETTNYEENESETKTSE- 179
Query: 604 DYKEEEKHHKKLEHLGELGTTAAGAYALHEKHKSEKDPENAHRHKLEEEVAAAAAVGAGG 425
DYKEE+KHHK LE +G LG AAGA+ALHEKHK+EKDPENAH+HK+EE +AAAAA+GAGG
Sbjct: 180 DYKEEKKHHKHLEEIGGLGAVAAGAFALHEKHKAEKDPENAHKHKIEEGIAAAAAIGAGG 239
Query: 424 FAFHEHHEKKEAKEEEEESHGKKHHHLF 341
FAFHEHHEKKEAKEEEEE+ GKK HH F
Sbjct: 240 FAFHEHHEKKEAKEEEEEAEGKKKHHFF 267
>pir||S53488 water-stress-inducible protein DS2 - Chaco potato
gi|607905|gb|AAA86052.1| abscisic stress ripening protein
Length = 263
Score = 209 bits (532), Expect = 6e-53
Identities = 124/258 (48%), Positives = 151/258 (58%), Gaps = 26/258 (10%)
Frame = -1
Query: 1036 GLFHHHKNEDRPTDTE-TGYNKTSYSTDEPSG--------GDYDSGYKKSSY-------E 905
GLFHHHKNE+ T E T Y +T+Y E + GD G K +++ E
Sbjct: 6 GLFHHHKNEEEDTPVEKTTYEETTYGESEKTSTYGEKTSYGDDTYGEKTTTFGDDNKYGE 65
Query: 904 TSGGGYETGYNKTSSYSTD----EPNSGGGGYDSGYN-KTAYSTDEPSGGGYGTGGAGGG 740
+ G +T K +SY D E S G G D+ Y KT+Y + + G T G
Sbjct: 66 KTSYGDDTYGEKPTSYGGDNTYGEKTSYGKGDDNKYGEKTSYGEGDDNKYGEKTSYGDSG 125
Query: 739 YSTGGGYGTGGGG--GGEYSTGGGGGGYSTGGG---GYGNDDSGNRRDEVDYKEEEKHHK 575
Y YG G G + S G GGY G G Y ++S + E DYKEE+KHHK
Sbjct: 126 YGEKPSYGGGDDNKYGEKTSYGNEEGGYGGGVGETTNYEENESETKTSE-DYKEEKKHHK 184
Query: 574 KLEHLGELGTTAAGAYALHEKHKSEKDPENAHRHKLEEEVAAAAAVGAGGFAFHEHHEKK 395
LE +G LG AAGA+ALHEKHK+EKDPENAH+HK+EE +AAAAA+GAGGFAFHEHHEKK
Sbjct: 185 HLEEIGGLGAVAAGAFALHEKHKAEKDPENAHKHKIEEGIAAAAAIGAGGFAFHEHHEKK 244
Query: 394 EAKEEEEESHGKKHHHLF 341
EAKEEEEE+ GKK HH F
Sbjct: 245 EAKEEEEEAEGKKKHHFF 262
>dbj|BAB19963.1| putative ripening protein [Calystegia soldanella]
Length = 248
Score = 190 bits (483), Expect = 3e-47
Identities = 114/251 (45%), Positives = 136/251 (53%), Gaps = 14/251 (5%)
Frame = -1
Query: 1051 ENRDRGLFHHHKNEDRPTDTETGYNKTSYSTD--EPSGGDYDSGYKKS-------SYETS 899
E + LF HHK+++ G N S D E D Y+K SYE
Sbjct: 3 EEKHHHLFGHHKDKEEERQPSYGENTYGSSDDSYERKNTYGDDSYEKKNTYGGDDSYERK 62
Query: 898 GGGYETGYNKTSSYSTDEP---NSGGGGYDSGYNKTAYSTDEP--SGGGYGTGGAGGGYS 734
E Y K ++Y DE + GG +S K Y DE YG +
Sbjct: 63 NTYGEDSYEKKNTYGGDESYERKNTYGGDESYEKKNTYGGDESYERKNNYGDNNESSYEN 122
Query: 733 TGGGYGTGGGGGGEYSTGGGGGGYSTGGGGYGNDDSGNRRDEVDYKEEEKHHKKLEHLGE 554
GYG G Y GGG G G ++ G R E DY++E+KHHK LE LG
Sbjct: 123 KPTGYGKTSYGEDSY----GGGQTDKYGSATGIEEEGGRTHE-DYEKEKKHHKHLEELGG 177
Query: 553 LGTTAAGAYALHEKHKSEKDPENAHRHKLEEEVAAAAAVGAGGFAFHEHHEKKEAKEEEE 374
LGT AAGAYAL+EKH+++KDPENAHRHK+EEEVAAA AVG+GGFAFHEHHEKKE KEEEE
Sbjct: 178 LGTVAAGAYALYEKHEAKKDPENAHRHKIEEEVAAAVAVGSGGFAFHEHHEKKETKEEEE 237
Query: 373 ESHGKKHHHLF 341
E+ GKK HH F
Sbjct: 238 EAEGKKKHHFF 248
Score = 38.1 bits (87), Expect = 0.24
Identities = 23/77 (29%), Positives = 30/77 (38%)
Frame = -1
Query: 1054 EENRDRGLFHHHKNEDRPTDTETGYNKTSYSTDEPSGGDYDSGYKKSSYETSGGGYETGY 875
+E+ +R + NE + TGY KTSY D GG D + E GG Y
Sbjct: 103 DESYERKNNYGDNNESSYENKPTGYGKTSYGEDSYGGGQTDKYGSATGIEEEGGRTHEDY 162
Query: 874 NKTSSYSTDEPNSGGGG 824
K + GG G
Sbjct: 163 EKEKKHHKHLEELGGLG 179
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,067,242,369
Number of Sequences: 1393205
Number of extensions: 34076952
Number of successful extensions: 1016281
Number of sequences better than 10.0: 13071
Number of HSP's better than 10.0 without gapping: 150412
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 441821
length of database: 448,689,247
effective HSP length: 125
effective length of database: 274,538,622
effective search space used: 65614730658
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
EST assemble image
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clone |
accession |
position |
| 1 |
MF023g03_f |
BP029495 |
1 |
383 |
| 2 |
MF049f07_f |
BP030882 |
2 |
415 |
| 3 |
MF031e09_f |
BP029915 |
2 |
525 |
| 4 |
MF085e03_f |
BP032774 |
8 |
492 |
| 5 |
MF037c02_f |
BP030243 |
20 |
517 |
| 6 |
MF036d07_f |
BP030204 |
62 |
355 |
| 7 |
MF001d08_f |
BP028269 |
70 |
614 |
| 8 |
MF018d12_f |
BP029196 |
71 |
608 |
| 9 |
MF036a03_f |
BP030180 |
71 |
582 |
| 10 |
MF045h12_f |
BP030699 |
71 |
552 |
| 11 |
MF036g02_f |
BP030220 |
71 |
551 |
| 12 |
MF040a05_f |
BP030363 |
71 |
628 |
| 13 |
MF035c08_f |
BP030140 |
71 |
497 |
| 14 |
MWL067c10_f |
AV769766 |
71 |
546 |
| 15 |
MF005c02_f |
BP028482 |
71 |
289 |
| 16 |
MF069b04_f |
BP031951 |
71 |
549 |
| 17 |
MF013c10_f |
BP028917 |
72 |
333 |
| 18 |
MF016g06_f |
BP029109 |
73 |
171 |
| 19 |
MF054a02_f |
BP031119 |
74 |
609 |
| 20 |
MF009f06_f |
BP028704 |
74 |
533 |
| 21 |
MF087f08_f |
BP032888 |
74 |
602 |
| 22 |
MF082e12_f |
BP032629 |
75 |
568 |
| 23 |
MF035e08_f |
BP030155 |
75 |
564 |
| 24 |
MF036g05_f |
BP030221 |
75 |
606 |
| 25 |
MF081g08_f |
BP032586 |
77 |
604 |
| 26 |
MF028e10_f |
BP029746 |
78 |
552 |
| 27 |
SPDL048b02_f |
BP054989 |
78 |
605 |
| 28 |
MF040a10_f |
BP030367 |
78 |
412 |
| 29 |
SPD080h11_f |
BP050425 |
79 |
546 |
| 30 |
MF073f05_f |
BP032183 |
80 |
571 |
| 31 |
MF031b06_f |
BP029894 |
81 |
554 |
| 32 |
MF075d09_f |
BP032278 |
86 |
620 |
| 33 |
MF050e03_f |
BP030934 |
92 |
644 |
| 34 |
MF027f11_f |
BP029700 |
93 |
479 |
| 35 |
SPD071g06_f |
BP049704 |
93 |
575 |
| 36 |
MF005f12_f |
BP028504 |
94 |
653 |
| 37 |
SPD031d12_f |
BP046465 |
96 |
547 |
| 38 |
MF070e09_f |
BP032016 |
100 |
540 |
| 39 |
MPD007h07_f |
AV770491 |
480 |
1076 |
| 40 |
MF079e09_f |
BP032480 |
539 |
1076 |
| 41 |
MF099d09_f |
BP033449 |
547 |
1108 |
| 42 |
MF090c09_f |
BP033015 |
575 |
1095 |
| 43 |
MF029b12_f |
BP029782 |
584 |
1103 |
| 44 |
MF041d08_f |
BP030439 |
607 |
1103 |
| 45 |
MPD071a03_f |
AV774658 |
679 |
1120 |
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Lotus japonicus
Kazusa DNA Research Institute