Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005042A_C01 KMC005042A_c01
(607 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM65762.1| coclaurine N-methyltransferase [Arabidopsis thali... 258 3e-68
ref|NP_567912.1| putative protein; protein id: At4g33110.1, supp... 258 3e-68
dbj|BAC42939.1| unknown protein [Arabidopsis thaliana] 258 3e-68
gb|AAO64813.1| At4g33120 [Arabidopsis thaliana] 251 5e-66
ref|NP_195038.1| putative protein; protein id: At4g33120.1 [Arab... 244 6e-64
>gb|AAM65762.1| coclaurine N-methyltransferase [Arabidopsis thaliana]
Length = 355
Score = 258 bits (660), Expect = 3e-68
Identities = 113/144 (78%), Positives = 133/144 (91%)
Frame = -2
Query: 606 YKDLLKKISKWMKEDSLLFVHHFCHKAFAYHFEDESEDDWITRYFFTGGTMPAANLLLYF 427
Y +LLKKI KWMKEDSLLFVH+FCHK FAYHFED ++DDWITR+FF+GGTMP+A+LLLYF
Sbjct: 212 YGELLKKIGKWMKEDSLLFVHYFCHKTFAYHFEDVNDDDWITRHFFSGGTMPSADLLLYF 271
Query: 426 QDDVSVVNHWLVNGKHYAQTSEEWLKRMDKNMSSIKPIMESTYGKDSAIKWTVYWRTFFI 247
Q++VS+V+HWLV+G HYA+TSEEWLKRMDK + ++K IME TYGK+ A+KW VYWRTFFI
Sbjct: 272 QENVSIVDHWLVSGTHYAKTSEEWLKRMDKEIVAVKEIMEVTYGKEEAVKWMVYWRTFFI 331
Query: 246 AVAELFGYNNGDEWMVAHFLFKKK 175
AVAELFGYNNG+EWMVAHFLFKKK
Sbjct: 332 AVAELFGYNNGEEWMVAHFLFKKK 355
>ref|NP_567912.1| putative protein; protein id: At4g33110.1, supported by cDNA: 4369.
[Arabidopsis thaliana] gi|22531140|gb|AAM97074.1|
putative protein [Arabidopsis thaliana]
Length = 355
Score = 258 bits (660), Expect = 3e-68
Identities = 113/144 (78%), Positives = 133/144 (91%)
Frame = -2
Query: 606 YKDLLKKISKWMKEDSLLFVHHFCHKAFAYHFEDESEDDWITRYFFTGGTMPAANLLLYF 427
Y +LLKKI KWMKEDSLLFVH+FCHK FAYHFED ++DDWITR+FF+GGTMP+A+LLLYF
Sbjct: 212 YGELLKKIGKWMKEDSLLFVHYFCHKTFAYHFEDVNDDDWITRHFFSGGTMPSADLLLYF 271
Query: 426 QDDVSVVNHWLVNGKHYAQTSEEWLKRMDKNMSSIKPIMESTYGKDSAIKWTVYWRTFFI 247
Q++VS+V+HWLV+G HYA+TSEEWLKRMDK + ++K IME TYGK+ A+KW VYWRTFFI
Sbjct: 272 QENVSIVDHWLVSGTHYAKTSEEWLKRMDKEIVAVKKIMEVTYGKEEAVKWMVYWRTFFI 331
Query: 246 AVAELFGYNNGDEWMVAHFLFKKK 175
AVAELFGYNNG+EWMVAHFLFKKK
Sbjct: 332 AVAELFGYNNGEEWMVAHFLFKKK 355
>dbj|BAC42939.1| unknown protein [Arabidopsis thaliana]
Length = 355
Score = 258 bits (660), Expect = 3e-68
Identities = 113/144 (78%), Positives = 133/144 (91%)
Frame = -2
Query: 606 YKDLLKKISKWMKEDSLLFVHHFCHKAFAYHFEDESEDDWITRYFFTGGTMPAANLLLYF 427
Y +LLKKI KWMKEDSLLFVH+FCHK FAYHFED ++DDWITR+FF+GGTMP+A+LLLYF
Sbjct: 212 YGELLKKIGKWMKEDSLLFVHYFCHKTFAYHFEDVNDDDWITRHFFSGGTMPSADLLLYF 271
Query: 426 QDDVSVVNHWLVNGKHYAQTSEEWLKRMDKNMSSIKPIMESTYGKDSAIKWTVYWRTFFI 247
Q++VS+V+HWLV+G HYA+TSEEWLKRMDK + ++K IME TYGK+ A+KW VYWRTFFI
Sbjct: 272 QENVSIVDHWLVSGTHYAKTSEEWLKRMDKEIVAVKKIMEVTYGKEEAVKWMVYWRTFFI 331
Query: 246 AVAELFGYNNGDEWMVAHFLFKKK 175
AVAELFGYNNG+EWMVAHFLFKKK
Sbjct: 332 AVAELFGYNNGEEWMVAHFLFKKK 355
>gb|AAO64813.1| At4g33120 [Arabidopsis thaliana]
Length = 355
Score = 251 bits (641), Expect = 5e-66
Identities = 108/144 (75%), Positives = 130/144 (90%)
Frame = -2
Query: 606 YKDLLKKISKWMKEDSLLFVHHFCHKAFAYHFEDESEDDWITRYFFTGGTMPAANLLLYF 427
Y +LLKKI WMKEDSLLFVH+ CHK +AYHFED ++DDWITR+FF+GGTMP+A+LLLYF
Sbjct: 212 YGELLKKIGNWMKEDSLLFVHYLCHKTYAYHFEDVNDDDWITRHFFSGGTMPSADLLLYF 271
Query: 426 QDDVSVVNHWLVNGKHYAQTSEEWLKRMDKNMSSIKPIMESTYGKDSAIKWTVYWRTFFI 247
Q++VS+++HWLVNG HYA+TSEEWLK MDK + ++K IME TYGK+ A+KWTVYWRTFFI
Sbjct: 272 QENVSIMDHWLVNGTHYAKTSEEWLKGMDKEIVAVKEIMEVTYGKEEAVKWTVYWRTFFI 331
Query: 246 AVAELFGYNNGDEWMVAHFLFKKK 175
A+AELF YNNGDEWM+AHFLFKKK
Sbjct: 332 ALAELFAYNNGDEWMIAHFLFKKK 355
>ref|NP_195038.1| putative protein; protein id: At4g33120.1 [Arabidopsis thaliana]
gi|7486450|pir||T05192 hypothetical protein F4I10.50 -
Arabidopsis thaliana gi|4455326|emb|CAB36786.1| putative
protein [Arabidopsis thaliana]
gi|7270259|emb|CAB80029.1| putative protein [Arabidopsis
thaliana]
Length = 296
Score = 244 bits (623), Expect = 6e-64
Identities = 108/151 (71%), Positives = 130/151 (85%), Gaps = 7/151 (4%)
Frame = -2
Query: 606 YKDLLKKISKWMKEDSLLFVHHFCHKAFAYHFEDESEDDWITRYFFTGGTMPAANLLLYF 427
Y +LLKKI WMKEDSLLFVH+ CHK +AYHFED ++DDWITR+FF+GGTMP+A+LLLYF
Sbjct: 146 YGELLKKIGNWMKEDSLLFVHYLCHKTYAYHFEDVNDDDWITRHFFSGGTMPSADLLLYF 205
Query: 426 Q-------DDVSVVNHWLVNGKHYAQTSEEWLKRMDKNMSSIKPIMESTYGKDSAIKWTV 268
Q ++VS+++HWLVNG HYA+TSEEWLK MDK + ++K IME TYGK+ A+KWTV
Sbjct: 206 QVIYIITCENVSIMDHWLVNGTHYAKTSEEWLKGMDKEIVAVKEIMEVTYGKEEAVKWTV 265
Query: 267 YWRTFFIAVAELFGYNNGDEWMVAHFLFKKK 175
YWRTFFIA+AELF YNNGDEWM+AHFLFKKK
Sbjct: 266 YWRTFFIALAELFAYNNGDEWMIAHFLFKKK 296
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 522,326,069
Number of Sequences: 1393205
Number of extensions: 11360831
Number of successful extensions: 28098
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 26905
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28062
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 23997478008
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
