Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005041A_C01 KMC005041A_c01
(599 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_199829.1| protein kinase ATN1-like protein; protein id: A... 230 1e-59
ref|NP_198870.1| protein kinase - like protein; protein id: At5g... 198 5e-50
pir||S61766 protein kinase ATN1 (EC 2.7.1.-) - Arabidopsis thali... 192 2e-48
ref|NP_189393.1| putative protein kinase, ATN1; protein id: At3g... 192 3e-48
gb|AAM98213.1| protein kinase ATN1-like protein [Arabidopsis tha... 130 1e-29
>ref|NP_199829.1| protein kinase ATN1-like protein; protein id: At5g50180.1
[Arabidopsis thaliana] gi|9759020|dbj|BAB09389.1|
protein kinase ATN1-like protein [Arabidopsis thaliana]
gi|28416673|gb|AAO42867.1| At5g50180 [Arabidopsis
thaliana]
Length = 346
Score = 230 bits (586), Expect = 1e-59
Identities = 108/148 (72%), Positives = 121/148 (80%)
Frame = -1
Query: 596 GEKKHYNHKVDAYSFAIVFWELLHNKVPFEGMSNLQAAYAAAFKSVRPSAENLPEELAVI 417
GEKKHYNHKVDAYSFAIV WELLHNK+PFEGMSNLQAAYAAAFK+VRPSAE+LPEEL I
Sbjct: 199 GEKKHYNHKVDAYSFAIVLWELLHNKLPFEGMSNLQAAYAAAFKNVRPSAESLPEELGDI 258
Query: 416 LTSCWQEDPNARPNFTRIIQMLLNYLYTVSPPEPVIPSRIFTPENTVFPPESPGTRSLMA 237
+TSCW EDPNARPNFT II++LLNYL V P IP RI +NT+ PP+SPGT SLMA
Sbjct: 259 VTSCWNEDPNARPNFTHIIELLLNYLSKVGSPISAIPQRILASKNTLLPPDSPGTSSLMA 318
Query: 236 KRDDTGDTPRAKDEIKSNGFLCCFSQCY 153
K D+ G+TP+AK E K G CF+QCY
Sbjct: 319 KLDECGETPKAKSEDKRKGLFFCFNQCY 346
>ref|NP_198870.1| protein kinase - like protein; protein id: At5g40540.1 [Arabidopsis
thaliana] gi|9758080|dbj|BAB08524.1| protein kinase ATN1
[Arabidopsis thaliana]
Length = 353
Score = 198 bits (503), Expect = 5e-50
Identities = 99/148 (66%), Positives = 118/148 (78%), Gaps = 5/148 (3%)
Frame = -1
Query: 596 GEKKHYNHKVDAYSFAIVFWELLHNKVPFEGMSNLQAAYAAAFKSVRPSAENLPEELAVI 417
GEKKHYNHKVDAYSFAIV WEL+HNK+PFEGMSNLQAAYAAAFK+VRPSA++LP++LA+I
Sbjct: 205 GEKKHYNHKVDAYSFAIVLWELIHNKLPFEGMSNLQAAYAAAFKNVRPSADDLPKDLAMI 264
Query: 416 LTSCWQEDPNARPNFTRIIQMLLNYLYTVSPPEPVIPS--RIFTPENTVFPPESPGTRSL 243
+TSCW+EDPN RPNFT IIQMLL L T+S E V P+ R+F+ ENTV PPESPGT SL
Sbjct: 265 VTSCWKEDPNDRPNFTEIIQMLLRCLSTISSTELVPPAIKRVFSSENTVLPPESPGTCSL 324
Query: 242 MAKRDD---TGDTPRAKDEIKSNGFLCC 168
M RD D A++E++ + F C
Sbjct: 325 MTVRDKDQIPTDANSAQNEVRGSFFFFC 352
>pir||S61766 protein kinase ATN1 (EC 2.7.1.-) - Arabidopsis thaliana
gi|1054633|emb|CAA63387.1| protein kinase [Arabidopsis
thaliana]
Length = 356
Score = 192 bits (489), Expect = 2e-48
Identities = 99/154 (64%), Positives = 117/154 (75%), Gaps = 10/154 (6%)
Frame = -1
Query: 599 QGEKKHYNHKVDAYSFAIVFWELLHNKVPFEGMSNLQAAYAAAFKSVRPSAENLPEELAV 420
QGEKKHYNHKVDAYSFAIV WEL+ NK+PFEGMSNLQAAYAAAFK++RPSAE+LP +L +
Sbjct: 204 QGEKKHYNHKVDAYSFAIVLWELILNKLPFEGMSNLQAAYAAAFKNLRPSAEDLPGDLEM 263
Query: 419 ILTSCWQEDPNARPNFTRIIQMLLNYLYTVSPPE--PVIPSRIFTPENTVFPPESPGTRS 246
I+TSCW+EDPN RPNFT IIQMLL YL TVS P+ P + R+F+ EN V PESPGT S
Sbjct: 264 IVTSCWKEDPNERPNFTEIIQMLLRYLTTVSAPQIIPPLNRRVFSSENIVLSPESPGTCS 323
Query: 245 LMAKRDDTGDTPR--------AKDEIKSNGFLCC 168
LM+ RD GD R ++ + K + F CC
Sbjct: 324 LMSVRD--GDVSRQTVNTADSSEKQTKGSFFSCC 355
>ref|NP_189393.1| putative protein kinase, ATN1; protein id: At3g27560.1, supported
by cDNA: gi_16604327, supported by cDNA: gi_19699189
[Arabidopsis thaliana] gi|11994183|dbj|BAB01286.1|
nearly identical to protein kinase ATN1 [Arabidopsis
thaliana] gi|16604328|gb|AAL24170.1| AT3g27560/MMJ24_11
[Arabidopsis thaliana] gi|19699190|gb|AAL90961.1|
AT3g27560/MMJ24_11 [Arabidopsis thaliana]
Length = 356
Score = 192 bits (488), Expect = 3e-48
Identities = 99/154 (64%), Positives = 117/154 (75%), Gaps = 10/154 (6%)
Frame = -1
Query: 599 QGEKKHYNHKVDAYSFAIVFWELLHNKVPFEGMSNLQAAYAAAFKSVRPSAENLPEELAV 420
QGEKKHYNHKVDAYSFAIV WEL+ NK+PFEGMSNLQAAYAAAFK++RPSAE+LP +L +
Sbjct: 204 QGEKKHYNHKVDAYSFAIVLWELILNKLPFEGMSNLQAAYAAAFKNLRPSAEDLPGDLEM 263
Query: 419 ILTSCWQEDPNARPNFTRIIQMLLNYLYTVSPPEPVIP--SRIFTPENTVFPPESPGTRS 246
I+TSCW+EDPN RPNFT IIQMLL YL TVS P+ + P R+F+ EN V PESPGT S
Sbjct: 264 IVTSCWKEDPNERPNFTEIIQMLLRYLTTVSAPQIIPPPNRRVFSSENIVLSPESPGTCS 323
Query: 245 LMAKRDDTGDTPR--------AKDEIKSNGFLCC 168
LM+ RD GD R ++ + K + F CC
Sbjct: 324 LMSVRD--GDVSRQTVNTADSSEKQTKGSFFSCC 355
>gb|AAM98213.1| protein kinase ATN1-like protein [Arabidopsis thaliana]
gi|25084113|gb|AAN72179.1| protein kinase ATN1-like
protein [Arabidopsis thaliana]
Length = 333
Score = 130 bits (328), Expect = 1e-29
Identities = 62/96 (64%), Positives = 75/96 (77%), Gaps = 1/96 (1%)
Frame = -1
Query: 599 QGEKKHYNHKVDAYSFAIVFWELLHNKVPFEGMSNLQAAYAAAFKSVRP-SAENLPEELA 423
QGEKKHYN+KVD YSF IV WELL N++PFEGMSNLQAAYAAAFK RP E + LA
Sbjct: 196 QGEKKHYNNKVDVYSFGIVLWELLTNRMPFEGMSNLQAAYAAAFKQERPVMPEGISPSLA 255
Query: 422 VILTSCWQEDPNARPNFTRIIQMLLNYLYTVSPPEP 315
I+ SCW EDPN RP+F++II++L +L T++PP P
Sbjct: 256 FIVQSCWVEDPNMRPSFSQIIRLLNEFLLTLTPPPP 291
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 502,688,420
Number of Sequences: 1393205
Number of extensions: 10911277
Number of successful extensions: 31719
Number of sequences better than 10.0: 2271
Number of HSP's better than 10.0 without gapping: 29339
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30642
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 23426109484
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
