Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005028A_C01 KMC005028A_c01
(574 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_609877.2| CG12750-PA [Drosophila melanogaster] gi|2294674... 46 3e-04
gb|AAL29144.1| SD04745p [Drosophila melanogaster] 46 3e-04
gb|AAO32448.1| MNN4 [Saccharomyces bayanus] 44 0.002
gb|AAO51593.1| similar to Plasmodium falciparum (isolate 3D7). H... 43 0.002
ref|NP_702833.1| hypothetical protein [Plasmodium falciparum 3D7... 43 0.002
>ref|NP_609877.2| CG12750-PA [Drosophila melanogaster] gi|22946749|gb|AAF53667.3|
CG12750-PA [Drosophila melanogaster]
Length = 1330
Score = 46.2 bits (108), Expect = 3e-04
Identities = 34/95 (35%), Positives = 51/95 (52%)
Frame = +2
Query: 218 SECIADQEERTVVLRESESCDVTSDILF*MERQRRKEEGSDKKKIEKKRKESENMVTDKT 397
SE ++++ + ES S D +S+ +++RK + DKKK +K KE +K
Sbjct: 954 SEDSSEEDSSSDSSSESSSSDSSSE-----PKKKRKRKDKDKKKSKKATKEKSKKTKNKK 1008
Query: 398 KDKKE*NERELEKDI*EKEVQVLSKLKEERDTYRK 502
K KK E+E EK EKE Q SK ++E+D RK
Sbjct: 1009 KKKKA--EKEQEK---EKEKQRKSKKEKEKDKKRK 1038
>gb|AAL29144.1| SD04745p [Drosophila melanogaster]
Length = 751
Score = 46.2 bits (108), Expect = 3e-04
Identities = 34/95 (35%), Positives = 51/95 (52%)
Frame = +2
Query: 218 SECIADQEERTVVLRESESCDVTSDILF*MERQRRKEEGSDKKKIEKKRKESENMVTDKT 397
SE ++++ + ES S D +S+ +++RK + DKKK +K KE +K
Sbjct: 363 SEDSSEEDSSSDSSSESSSSDSSSE-----PKKKRKRKDKDKKKSKKATKEKSKKTKNKK 417
Query: 398 KDKKE*NERELEKDI*EKEVQVLSKLKEERDTYRK 502
K KK E+E EK EKE Q SK ++E+D RK
Sbjct: 418 KKKKA--EKEQEK---EKEKQRKSKKEKEKDKKRK 447
>gb|AAO32448.1| MNN4 [Saccharomyces bayanus]
Length = 376
Score = 43.5 bits (101), Expect = 0.002
Identities = 31/133 (23%), Positives = 68/133 (50%), Gaps = 6/133 (4%)
Frame = +2
Query: 122 NMVPLHFLGREENYTDRANTELEQMTYHIHSFSECIADQEERTVVLRESESCDVTSDILF 301
N+ P+ F + + N L+ +Y + F+ ++D + +++ + + V D +
Sbjct: 185 NVNPVDF---QSHLNFSGNPFLDLNSYGLDLFAPTLSDSNRKGILMFDKDPIIVYEDFAY 241
Query: 302 *--MERQRRKEEGSDKKKIE----KKRKESENMVTDKTKDKKE*NERELEKDI*EKEVQV 463
+ER+++KE+ KKK E KK +E + ++ K KKE E++ +++ +K+ +
Sbjct: 242 AKVLERRKKKEKEDKKKKEEEDKKKKEEEEKKKKEEEAKKKKEEEEKKKKEEEDKKKKEE 301
Query: 464 LSKLKEERDTYRK 502
K K+E + +K
Sbjct: 302 DEKKKKEEEDKKK 314
Score = 37.4 bits (85), Expect = 0.13
Identities = 21/65 (32%), Positives = 41/65 (62%)
Frame = +2
Query: 308 ERQRRKEEGSDKKKIEKKRKESENMVTDKTKDKKE*NERELEKDI*EKEVQVLSKLKEER 487
E +++KEE + KKK E+++K+ E ++ K KKE +E++ +++ +K+ + K EE
Sbjct: 270 EEKKKKEEEAKKKKEEEEKKKKE----EEDKKKKEEDEKKKKEEEDKKKKEEEGKNNEEE 325
Query: 488 DTYRK 502
D +K
Sbjct: 326 DKKKK 330
Score = 36.2 bits (82), Expect = 0.30
Identities = 21/65 (32%), Positives = 40/65 (61%)
Frame = +2
Query: 308 ERQRRKEEGSDKKKIEKKRKESENMVTDKTKDKKE*NERELEKDI*EKEVQVLSKLKEER 487
E +++K+E DKKK E++ K +E ++ K KKE +E++ +++ +K+ + K EE
Sbjct: 301 EDEKKKKEEEDKKKKEEEGKNNE----EEDKKKKEEDEKKKKEEEDKKKKEEEGKNNEEE 356
Query: 488 DTYRK 502
D +K
Sbjct: 357 DKKKK 361
Score = 35.8 bits (81), Expect = 0.39
Identities = 22/65 (33%), Positives = 37/65 (56%)
Frame = +2
Query: 308 ERQRRKEEGSDKKKIEKKRKESENMVTDKTKDKKE*NERELEKDI*EKEVQVLSKLKEER 487
E +++KEE KKK E ++K+ E ++ K KKE + E++ +K+ + K KEE
Sbjct: 286 EEKKKKEEEDKKKKEEDEKKKKE----EEDKKKKEEEGKNNEEEDKKKKEEDEKKKKEEE 341
Query: 488 DTYRK 502
D +K
Sbjct: 342 DKKKK 346
Score = 34.7 bits (78), Expect = 0.87
Identities = 18/63 (28%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Frame = +2
Query: 308 ERQRRKEEGSDKKKIEKKRKESENMVTDKTKDKKE*NE--RELEKDI*EKEVQVLSKLKE 481
++++++EEG + ++ +KK+KE + + +DKK+ E + E++ +K+ + K KE
Sbjct: 311 DKKKKEEEGKNNEEEDKKKKEEDEKKKKEEEDKKKKEEEGKNNEEEDKKKKEEDEKKKKE 370
Query: 482 ERD 490
E D
Sbjct: 371 EED 373
Score = 33.9 bits (76), Expect = 1.5
Identities = 20/64 (31%), Positives = 38/64 (59%), Gaps = 5/64 (7%)
Frame = +2
Query: 308 ERQRRKEEGSDKKKIE-----KKRKESENMVTDKTKDKKE*NERELEKDI*EKEVQVLSK 472
E +++K+E DKKK E KK +E + ++ K+ +E ++++ E+D +K+ + K
Sbjct: 285 EEEKKKKEEEDKKKKEEDEKKKKEEEDKKKKEEEGKNNEEEDKKKKEEDEKKKKEEEDKK 344
Query: 473 LKEE 484
KEE
Sbjct: 345 KKEE 348
>gb|AAO51593.1| similar to Plasmodium falciparum (isolate 3D7). Hypothetical
protein [Dictyostelium discoideum]
Length = 1845
Score = 43.1 bits (100), Expect = 0.002
Identities = 26/88 (29%), Positives = 51/88 (57%)
Frame = +2
Query: 233 DQEERTVVLRESESCDVTSDILF*MERQRRKEEGSDKKKIEKKRKESENMVTDKTKDKKE 412
++EER RE ++ MER+++KE+ +K+K ++K KE E +K K+K++
Sbjct: 603 EREERERKEREEREKEIE------MEREKKKEKEKEKEKEKEKEKEKEK---EKEKEKEK 653
Query: 413 *NERELEKDI*EKEVQVLSKLKEERDTY 496
E+E ++ E E ++ + +E+ D+Y
Sbjct: 654 EKEKEKKRKENEVENEIEKERREKNDSY 681
Score = 36.2 bits (82), Expect = 0.30
Identities = 34/129 (26%), Positives = 63/129 (48%), Gaps = 11/129 (8%)
Frame = +2
Query: 149 REENYTDRANTELEQMTYHIHSFSECIADQEERTVVLR-ESESCDVTSDILF*MERQRR- 322
RE +R E+E+ E + ER R E E ++ + ER+R+
Sbjct: 533 REREREERERKEIERKEREREEREERERKEIERKETERKEIERKEIERKEIERKERERKE 592
Query: 323 ---KEEGSDKKKIEKKRKESE------NMVTDKTKDKKE*NERELEKDI*EKEVQVLSKL 475
+EE ++++ E++RKE E M +K K+K++ E+E EK+ EKE + +
Sbjct: 593 RKEREEREEREREERERKEREEREKEIEMEREKKKEKEKEKEKEKEKEK-EKEKEKEKEK 651
Query: 476 KEERDTYRK 502
++E++ +K
Sbjct: 652 EKEKEKEKK 660
Score = 36.2 bits (82), Expect = 0.30
Identities = 21/62 (33%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Frame = +2
Query: 308 ERQRRKEEGSDKK-KIEKKRKESENMVTDKTKDKKE*NERELEKDI*EKEVQVLSKLKEE 484
E++R KE +++ +IE++RKE E +K + K++ ERE E+ KE++ + +EE
Sbjct: 496 EKEREKERKREREIEIERERKERERKEREKERKKEKEREREREERE-RKEIERKEREREE 554
Query: 485 RD 490
R+
Sbjct: 555 RE 556
Score = 35.0 bits (79), Expect = 0.67
Identities = 19/66 (28%), Positives = 36/66 (53%)
Frame = +2
Query: 305 MERQRRKEEGSDKKKIEKKRKESENMVTDKTKDKKE*NERELEKDI*EKEVQVLSKLKEE 484
+ER+R++ E +++K KK KE E ++ + + E ERE E+ + ++ K E
Sbjct: 511 IERERKERERKEREKERKKEKEREREREERERKEIERKEREREEREERERKEIERKETER 570
Query: 485 RDTYRK 502
++ RK
Sbjct: 571 KEIERK 576
Score = 34.7 bits (78), Expect = 0.87
Identities = 21/65 (32%), Positives = 39/65 (59%), Gaps = 5/65 (7%)
Frame = +2
Query: 323 KEEGSDKKKIEKKRKESENMVTDKTKDKKE*NERELEKD-I*EKEVQVLSKLKE----ER 487
K + +KK+IEK++++ + K K+ + NE+E EK+ E+E+++ + KE ER
Sbjct: 464 KNKNKNKKEIEKEKEKLREALKQKLKEYENENEKEREKERKREREIEIERERKERERKER 523
Query: 488 DTYRK 502
+ RK
Sbjct: 524 EKERK 528
Score = 33.9 bits (76), Expect = 1.5
Identities = 19/65 (29%), Positives = 38/65 (58%)
Frame = +2
Query: 308 ERQRRKEEGSDKKKIEKKRKESENMVTDKTKDKKE*NERELEKDI*EKEVQVLSKLKEER 487
ER+R + E ++++ EK+ + +K K+K++ E+E EK EKE + + ++E+
Sbjct: 601 EREREERERKEREEREKEIEMEREKKKEKEKEKEKEKEKEKEK---EKEKEKEKEKEKEK 657
Query: 488 DTYRK 502
+ RK
Sbjct: 658 EKKRK 662
>ref|NP_702833.1| hypothetical protein [Plasmodium falciparum 3D7]
gi|23498249|emb|CAD49220.1| hypothetical protein
[Plasmodium falciparum 3D7]
Length = 992
Score = 43.1 bits (100), Expect = 0.002
Identities = 30/109 (27%), Positives = 58/109 (52%), Gaps = 4/109 (3%)
Frame = +2
Query: 233 DQEERTVVLRESESCDVTSDILF*MERQRRKEEGSDKKKIEKKRKESENMVTDKTKDKKE 412
D E +L+E E+ + + ++KE+ KKK EKK++ S+++ + K KKE
Sbjct: 175 DNSELKQMLKEGEAHSERYPGMDYEQGDKKKEQQKRKKKKEKKKEGSQDIEEKEDKQKKE 234
Query: 413 *NERELEKDI*E----KEVQVLSKLKEERDTYRKGF*LYSFTQSFSSIL 547
E++L+K E K+ + ++K K+ +D ++ +S TQ ++L
Sbjct: 235 RKEKKLKKKAKEEKSKKDNKTITKAKKSKDQFK-----FSSTQELFNLL 278
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 475,952,568
Number of Sequences: 1393205
Number of extensions: 10753241
Number of successful extensions: 69674
Number of sequences better than 10.0: 790
Number of HSP's better than 10.0 without gapping: 51608
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 62517
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 21243732558
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
