KMC005017A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KMC005017A_C01 KMC005017A_c01
taaAAAAAAAGTACCTCTTAATTAAAAAGGAAATGATGACTTAATGTGGTACACATAAGT
TTAATACACATTAGCTCGGATATGATACACTAAGCCTAAAGTAGGGTATCCAAGCAAGCA
CCATATGAAAATATCATCTTCTTATTACTTCATTAAGAAATACTAATTGGGAAAAAAATG
CATTTTAAGAGACTATTCCCACCAAAGTCTTGAAATCCTGTGTTGCTTTCCCTTGTGGCC
CGTGCTGCATCCAGCACAGTCTTCTTCACCTTCTGTGCCTTTTCTCTCATGATCTTTCCC
TCTTCCTGCACCAGAATCAGATTCAAGCTTTTCACCAACCCATCTTTGGTGAACACCCCT
CCCTCAATCTTCACACCAATCTCCCAAATATCCTCAATGATTCTTCCAGCCATCCCATGA
TCTCCAAAGAATGGCCTGCAAATCATAGGCACCCCATTGGATATGCTCTCAAATACAGAG
TTGCACCCACAGTGAGTCACAAACACCCCAACAGATTCATGTCCTAAAATCTGAGTTTGA
GGAGCCCAAGGCACAATTTTTCCACTATTTTTTGTTCTCTCAATAAACCCATTTGGTAGA
AGGCTCTTCGGATGGTCCTTCATAGAC


Nr search

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC005017A_C01 KMC005017A_c01
         (627 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

dbj|BAA36972.1| flavonoid 3-O-galactosyl transferase [Vigna mungo]    220  1e-56
dbj|BAA90787.1| UDP glucose: flavonoid 3-O-glucosyltransferase [...   169  2e-41
dbj|BAB41017.1| UDP-glucose:flavonoid 3-O-glucosyltransferase [V...   157  6e-40
dbj|BAB41020.1| UDP-glucose:flavonoid 3-O-glucosyltransferase [V...   156  2e-39
sp|Q40289|UFO7_MANES Flavonol 3-O-glucosyltransferase 7 (UDP-glu...   163  2e-39

>dbj|BAA36972.1| flavonoid 3-O-galactosyl transferase [Vigna mungo]
          Length = 455

 Score =  220 bits (560), Expect = 1e-56
 Identities = 104/150 (69%), Positives = 126/150 (83%)
 Frame = -2

Query: 626 SMKDHPKSLLPNGFIERTKNSGKIVPWAPQTQILGHESVGVFVTHCGCNSVFESISNGVP 447
           S+K+H K +LPNGF+ERT   GK+V WAPQTQ+LGH SVGVFVTHCGCNSVFES+SNGVP
Sbjct: 308 SLKEHLKGVLPNGFLERTSERGKVVGWAPQTQVLGHGSVGVFVTHCGCNSVFESMSNGVP 367

Query: 446 MICRPFFGDHGMAGRIIEDIWEIGVKIEGGVFTKDGLVKSLNLILVQEEGKIMREKAQKV 267
           MICRPFFGDHG+ GR++ED+WEIGV++EGGVFTKDGL+KSL LILV+EEG +M++ A KV
Sbjct: 368 MICRPFFGDHGLTGRMVEDVWEIGVRVEGGVFTKDGLLKSLRLILVEEEGNLMKKNAVKV 427

Query: 266 KKTVLDAARATRESNTGFQDFGGNSLLKCI 177
           KKTVLDAA A        QDF  N+L++ +
Sbjct: 428 KKTVLDAAGA---QGKAAQDF--NTLVELV 452

>dbj|BAA90787.1| UDP glucose: flavonoid 3-O-glucosyltransferase [Ipomoea batatas]
          Length = 383

 Score =  169 bits (429), Expect = 2e-41
 Identities = 78/140 (55%), Positives = 99/140 (70%)
 Frame = -2

Query: 626 SMKDHPKSLLPNGFIERTKNSGKIVPWAPQTQILGHESVGVFVTHCGCNSVFESISNGVP 447
           S+K H    LP GF+ERTK  GKIVPWAPQ Q+L H  VGVFVTHCG NS  E+IS GV 
Sbjct: 235 SLKPHGVKHLPEGFVERTKEFGKIVPWAPQVQVLSHPGVGVFVTHCGWNSTLEAISCGVC 294

Query: 446 MICRPFFGDHGMAGRIIEDIWEIGVKIEGGVFTKDGLVKSLNLILVQEEGKIMREKAQKV 267
           MICRPF+GD  +  R +E +WEIGVKIEGG+FTKDG +K+LN++L  + GK+++E   K+
Sbjct: 295 MICRPFYGDQKINTRFVESVWEIGVKIEGGIFTKDGTMKALNVVLDSDRGKLLKENVVKL 354

Query: 266 KKTVLDAARATRESNTGFQD 207
           K   L+A +    S   FQ+
Sbjct: 355 KGEALEAVKPNGSSTKDFQE 374

>dbj|BAB41017.1| UDP-glucose:flavonoid 3-O-glucosyltransferase [Vitis labrusca x
           Vitis vinifera]
          Length = 456

 Score =  157 bits (398), Expect(2) = 6e-40
 Identities = 72/136 (52%), Positives = 102/136 (74%)
 Frame = -2

Query: 626 SMKDHPKSLLPNGFIERTKNSGKIVPWAPQTQILGHESVGVFVTHCGCNSVFESISNGVP 447
           S++D  +  LP GF+E+T+  G +VPWAPQ ++L HE+VG FVTHCG NS++ES++ GVP
Sbjct: 306 SLRDKARVHLPEGFLEKTRGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVP 365

Query: 446 MICRPFFGDHGMAGRIIEDIWEIGVKIEGGVFTKDGLVKSLNLILVQEEGKIMREKAQKV 267
           +ICRPFFGD  + GR++ED+ EIGV+IEGGVFTK GL+   + IL QE+GK +RE  + +
Sbjct: 366 LICRPFFGDQRLNGRMVEDVLEIGVRIEGGVFTKSGLMSCFDQILSQEKGKKLRENLRAL 425

Query: 266 KKTVLDAARATRESNT 219
           ++T  D A   + S+T
Sbjct: 426 RETA-DRAVGPKGSST 440

 Score = 28.5 bits (62), Expect(2) = 6e-40
 Identities = 11/18 (61%), Positives = 16/18 (88%)
 Frame = -3

Query: 241 GPQGKATQDFKTLVGIVS 188
           GP+G +T++FKTLV +VS
Sbjct: 434 GPKGSSTENFKTLVDLVS 451

>dbj|BAB41020.1| UDP-glucose:flavonoid 3-O-glucosyltransferase [Vitis vinifera]
           gi|13620865|dbj|BAB41022.1| UDP-glucose:flavonoid
           3-O-glucosyltransferase [Vitis vinifera]
          Length = 456

 Score =  156 bits (394), Expect(2) = 2e-39
 Identities = 72/136 (52%), Positives = 101/136 (73%)
 Frame = -2

Query: 626 SMKDHPKSLLPNGFIERTKNSGKIVPWAPQTQILGHESVGVFVTHCGCNSVFESISNGVP 447
           S++D  +  LP GF+E+T+  G +VPWAPQ ++L HE+VG FVTHCG NS++ES++ GVP
Sbjct: 306 SLRDKARVHLPEGFLEKTRGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVP 365

Query: 446 MICRPFFGDHGMAGRIIEDIWEIGVKIEGGVFTKDGLVKSLNLILVQEEGKIMREKAQKV 267
           +ICRPFFGD  + GR++ED  EIGV+IEGGVFTK GL+   + IL QE+GK +RE  + +
Sbjct: 366 LICRPFFGDQRLNGRMVEDALEIGVRIEGGVFTKSGLMSCFDQILSQEKGKKLRENLRAL 425

Query: 266 KKTVLDAARATRESNT 219
           ++T  D A   + S+T
Sbjct: 426 RETA-DRAVGPKGSST 440

 Score = 28.5 bits (62), Expect(2) = 2e-39
 Identities = 11/18 (61%), Positives = 16/18 (88%)
 Frame = -3

Query: 241 GPQGKATQDFKTLVGIVS 188
           GP+G +T++FKTLV +VS
Sbjct: 434 GPKGSSTENFKTLVDLVS 451

>sp|Q40289|UFO7_MANES Flavonol 3-O-glucosyltransferase 7 (UDP-glucose flavonoid
           3-O-glucosyltransferase 7) gi|542017|pir||S41953
           UTP-glucose glucosyltransferase - cassava
           gi|453253|emb|CAA54614.1| UTP-glucose
           glucosyltransferase [Manihot esculenta]
          Length = 287

 Score =  163 bits (412), Expect = 2e-39
 Identities = 74/140 (52%), Positives = 101/140 (71%)
 Frame = -2

Query: 626 SMKDHPKSLLPNGFIERTKNSGKIVPWAPQTQILGHESVGVFVTHCGCNSVFESISNGVP 447
           S+KDH K  LPNGF++RTK+ G ++ WAPQ +IL H ++GVFVTHCG NS+ ESI  GVP
Sbjct: 135 SLKDHSKVHLPNGFLDRTKSHGIVLSWAPQVEILEHAALGVFVTHCGWNSILESIVGGVP 194

Query: 446 MICRPFFGDHGMAGRIIEDIWEIGVKIEGGVFTKDGLVKSLNLILVQEEGKIMREKAQKV 267
           MICRPFFGD  + GR++ED+WEIG+ ++GGV TK+G +  LN IL+Q +GK MRE  +++
Sbjct: 195 MICRPFFGDQRLNGRMVEDVWEIGLLMDGGVLTKNGAIDGLNQILLQGKGKKMRENIKRL 254

Query: 266 KKTVLDAARATRESNTGFQD 207
           K+    A      S+  F +
Sbjct: 255 KELAKGATEPKGSSSKSFTE 274

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 588,714,186
Number of Sequences: 1393205
Number of extensions: 14057815
Number of successful extensions: 36925
Number of sequences better than 10.0: 760
Number of HSP's better than 10.0 without gapping: 35251
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36720
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 25586195130
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)


EST assemble image


clone accession position
1 MFB065a07_f BP038680 1 418
2 MPD053f01_f AV773576 4 493
3 MF099d12_f BP033452 19 548
4 MPD004a08_f AV770230 22 463
5 SPD023b05_f BP045789 24 375
6 SPD014f12_f BP045134 24 494
7 MFB026d08_f BP035886 28 561
8 MPD032b10_f AV772172 128 640
9 MF013g10_f BP028944 128 307




Lotus japonicus
Kazusa DNA Research Institute