Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005016A_C10 KMC005016A_c10
(679 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAC54828.1| vacuolar processing enzyme-1b [Nicotiana tabacum] 106 7e-30
dbj|BAA76744.1| asparaginyl endopeptidase (VmPE-1) [Vigna mungo] 105 3e-29
emb|CAC43295.1| putative vacuolar processing enzyme [Beta vulgaris] 106 4e-29
dbj|BAC54827.1| vacuolar processing enzyme-1a [Nicotiana tabacum] 105 2e-28
ref|NP_180165.1| putative vacuolar processing enzyme; protein id... 102 5e-28
>dbj|BAC54828.1| vacuolar processing enzyme-1b [Nicotiana tabacum]
Length = 489
Score = 106 bits (265), Expect(2) = 7e-30
Identities = 47/97 (48%), Positives = 67/97 (68%)
Frame = -2
Query: 651 SRLISQRDAKLFYLRHKLEKAMDGSNEKLQAQTELDAEMAHRKHVDKSVNLIGNLLFGED 472
S+ ++QRDA L + HK A +GS K++AQ +L+ ++HR H+D SV L+G LLFG +
Sbjct: 344 SKAVNQRDADLLHFWHKFRTAPEGSVRKIEAQKQLNEAISHRVHLDNSVALVGKLLFGIE 403
Query: 471 KSSNTMLHVRPAGQPLVDDWECFKTLMKTYERHCARL 361
K + VRPAGQPLVDDW+C K+ ++T+E HC L
Sbjct: 404 KGPEVLSGVRPAGQPLVDDWDCLKSFVRTFETHCGSL 440
Score = 46.2 bits (108), Expect(2) = 7e-30
Identities = 19/34 (55%), Positives = 26/34 (75%)
Frame = -3
Query: 362 LSSYGRKYTRAFANMCNAGISEKQLIAASLLACP 261
LS YG K+ R+ AN+CNAGI ++Q++ AS ACP
Sbjct: 440 LSQYGMKHMRSIANICNAGIKKEQMVEASAQACP 473
>dbj|BAA76744.1| asparaginyl endopeptidase (VmPE-1) [Vigna mungo]
Length = 483
Score = 105 bits (263), Expect(2) = 3e-29
Identities = 50/98 (51%), Positives = 66/98 (67%)
Frame = -2
Query: 654 PSRLISQRDAKLFYLRHKLEKAMDGSNEKLQAQTELDAEMAHRKHVDKSVNLIGNLLFGE 475
PS+ ++QRDA L + K KA GS+ K AQ ++ M+HR H+D SV LIG LLFG
Sbjct: 337 PSKAVNQRDADLVHFWDKFPKAPLGSSRKSVAQKQILEAMSHRMHIDDSVTLIGKLLFGI 396
Query: 474 DKSSNTMLHVRPAGQPLVDDWECFKTLMKTYERHCARL 361
++ + VRPAGQPLVDDW+C KTL++T+E HC L
Sbjct: 397 EEGPELLSSVRPAGQPLVDDWDCLKTLVRTFETHCGSL 434
Score = 44.7 bits (104), Expect(2) = 3e-29
Identities = 21/41 (51%), Positives = 27/41 (65%), Gaps = 6/41 (14%)
Frame = -3
Query: 362 LSSYGRKYTRAFANMCNAGISEKQLIAASLLAC------PW 258
LS YG K+ R+FAN+CNAGI ++Q+ AS AC PW
Sbjct: 434 LSQYGMKHMRSFANLCNAGIRKEQMAEASAQACVSIPATPW 474
>emb|CAC43295.1| putative vacuolar processing enzyme [Beta vulgaris]
Length = 486
Score = 106 bits (264), Expect(2) = 4e-29
Identities = 48/97 (49%), Positives = 64/97 (65%)
Frame = -2
Query: 651 SRLISQRDAKLFYLRHKLEKAMDGSNEKLQAQTELDAEMAHRKHVDKSVNLIGNLLFGED 472
S ++QRDA L + +K KA +GS K+ AQ + M+HR H+D S+ LIG LLFG +
Sbjct: 341 SNAVNQRDADLIHFWNKFRKASEGSQRKINAQKQFMEVMSHRVHLDDSIKLIGKLLFGIE 400
Query: 471 KSSNTMLHVRPAGQPLVDDWECFKTLMKTYERHCARL 361
K + VRP GQPLVDDW C KTL++T+E+HC L
Sbjct: 401 KGLGVLQTVRPTGQPLVDDWNCLKTLVRTFEKHCGSL 437
Score = 43.9 bits (102), Expect(2) = 4e-29
Identities = 19/34 (55%), Positives = 24/34 (69%)
Frame = -3
Query: 362 LSSYGRKYTRAFANMCNAGISEKQLIAASLLACP 261
LS YG K+ R+ AN+CNAGI+ Q+ AS ACP
Sbjct: 437 LSQYGMKHMRSIANICNAGITTNQMAEASAQACP 470
>dbj|BAC54827.1| vacuolar processing enzyme-1a [Nicotiana tabacum]
Length = 490
Score = 105 bits (262), Expect(2) = 2e-28
Identities = 46/97 (47%), Positives = 67/97 (68%)
Frame = -2
Query: 651 SRLISQRDAKLFYLRHKLEKAMDGSNEKLQAQTELDAEMAHRKHVDKSVNLIGNLLFGED 472
S+ ++QRDA L + +K KA +GS K++AQ +L+ ++HR H+D S+ L+G LLFG
Sbjct: 345 SKAVNQRDADLLHFWYKFRKAPEGSVRKIEAQKQLNEAISHRVHLDNSIALVGKLLFGIK 404
Query: 471 KSSNTMLHVRPAGQPLVDDWECFKTLMKTYERHCARL 361
K + VRPAGQPLVDDW+C K+ ++T+E HC L
Sbjct: 405 KGPEVLSSVRPAGQPLVDDWDCLKSFVRTFETHCGSL 441
Score = 42.7 bits (99), Expect(2) = 2e-28
Identities = 18/34 (52%), Positives = 23/34 (66%)
Frame = -3
Query: 362 LSSYGRKYTRAFANMCNAGISEKQLIAASLLACP 261
LS YG K+ R+ AN+CN GI Q++ AS ACP
Sbjct: 441 LSQYGMKHMRSIANICNVGIKMAQMVEASAQACP 474
>ref|NP_180165.1| putative vacuolar processing enzyme; protein id: At2g25940.1,
supported by cDNA: gi_16604313, supported by cDNA:
gi_19699181 [Arabidopsis thaliana]
gi|14917086|sp|P49047|VPEA_ARATH Vacuolar processing
enzyme, alpha-isozyme precursor (Alpha-VPE)
gi|7488417|pir||T02629 vacuolar processing enzyme (EC
3.4.22.-) isozyme alpha precursor - Arabidopsis thaliana
gi|3413718|gb|AAC31241.1| putative vacuolar processing
enzyme [Arabidopsis thaliana]
gi|12275303|dbj|BAA09614.2| alpha-VPE [Arabidopsis
thaliana] gi|16604314|gb|AAL24163.1| At2g25940/F17H15.3
[Arabidopsis thaliana] gi|19699182|gb|AAL90957.1|
At2g25940/F17H15.3 [Arabidopsis thaliana]
gi|20197366|gb|AAM15043.1| putative vacuolar processing
enzyme [Arabidopsis thaliana]
Length = 478
Score = 102 bits (255), Expect(2) = 5e-28
Identities = 49/98 (50%), Positives = 70/98 (71%)
Frame = -2
Query: 654 PSRLISQRDAKLFYLRHKLEKAMDGSNEKLQAQTELDAEMAHRKHVDKSVNLIGNLLFGE 475
PSR+ +QRDA L + HK +KA +GS K++AQ ++ M+HR HVD S+ LIG LLFG
Sbjct: 333 PSRVTNQRDADLVHFWHKYQKAPEGSARKVEAQKQVLEAMSHRLHVDNSILLIGILLFGL 392
Query: 474 DKSSNTMLHVRPAGQPLVDDWECFKTLMKTYERHCARL 361
+ + + VRP+G+PLVDDW+C K+L++ +ERHC L
Sbjct: 393 EGHA-VLNKVRPSGEPLVDDWDCLKSLVRAFERHCGSL 429
Score = 43.9 bits (102), Expect(2) = 5e-28
Identities = 19/34 (55%), Positives = 25/34 (72%)
Frame = -3
Query: 362 LSSYGRKYTRAFANMCNAGISEKQLIAASLLACP 261
LS YG K+ R+ ANMCNAGI +Q+ A++ ACP
Sbjct: 429 LSQYGIKHMRSIANMCNAGIQMRQMEEAAMQACP 462
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 557,346,391
Number of Sequences: 1393205
Number of extensions: 11619213
Number of successful extensions: 37301
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 36288
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37292
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 29987172312
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
