Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005009A_C01 KMC005009A_c01
(583 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAF64181.1|AF242498_1 phenylcoumaran benzylic ether reductase... 144 6e-34
gb|AAF64180.1|AF242497_1 phenylcoumaran benzylic ether reductase... 144 8e-34
gb|AAF64179.1|AF242496_1 phenylcoumaran benzylic ether reductase... 140 9e-33
gb|AAF64176.1|AF242493_1 phenylcoumaran benzylic ether reductase... 139 3e-32
pir||C96783 probable NADPH oxidoreductase, 14094-12769 [imported... 135 4e-31
>gb|AAF64181.1|AF242498_1 phenylcoumaran benzylic ether reductase homolog TH6 [Tsuga
heterophylla]
Length = 307
Score = 144 bits (364), Expect = 6e-34
Identities = 76/157 (48%), Positives = 107/157 (67%), Gaps = 1/157 (0%)
Frame = +3
Query: 105 ATAGRILIIGATGFMGQFMTKASLGLGRSTYLLLRPGSLT-PSKAAIVKSFQDRGAKVIH 281
A + +ILIIG TG++G+ ++KASL LG T+LL+R S + P KA +++SF+ GA +++
Sbjct: 2 ANSSKILIIGGTGYIGRHISKASLALGHPTFLLVRESSASNPEKAKLLESFKASGAIIVN 61
Query: 282 GVINDKELMVKI*KDYEIDVVISLVGGGNLMDQRTLVDAIKSVKTVKRFLPSEFGHDTDR 461
G + D+ +V+ K ++DVVIS V G L DQ ++ AIK + T+KRFLPSEFG+D DR
Sbjct: 62 GSLEDQASLVEAIK--KVDVVISAVKGPQLGDQLNIIKAIKEIGTIKRFLPSEFGNDVDR 119
Query: 462 ANPVEPGLTMYKEKRLIRRLIEESGIPYTYICCNSIA 572
+ VEP TM+ K IRR IE GIPYTY+ N A
Sbjct: 120 THAVEPAKTMFANKAKIRRAIEAEGIPYTYVSSNCFA 156
>gb|AAF64180.1|AF242497_1 phenylcoumaran benzylic ether reductase homolog TP5 [Tsuga
heterophylla]
Length = 307
Score = 144 bits (363), Expect = 8e-34
Identities = 76/157 (48%), Positives = 107/157 (67%), Gaps = 1/157 (0%)
Frame = +3
Query: 105 ATAGRILIIGATGFMGQFMTKASLGLGRSTYLLLRPGSLT-PSKAAIVKSFQDRGAKVIH 281
A + +ILIIG TG++G+ ++KASL LG T+LL+R S + P KA +++SF+ GA +++
Sbjct: 2 ANSSKILIIGGTGYIGRHISKASLALGHPTFLLVRESSASNPEKAKLLESFKASGAIIVN 61
Query: 282 GVINDKELMVKI*KDYEIDVVISLVGGGNLMDQRTLVDAIKSVKTVKRFLPSEFGHDTDR 461
G + D+ +V+ K ++DVVIS V G L DQ ++ AIK + T+KRFLPSEFG+D DR
Sbjct: 62 GSLEDQVSLVEAIK--KVDVVISAVKGPQLGDQLNIIKAIKEIGTIKRFLPSEFGNDVDR 119
Query: 462 ANPVEPGLTMYKEKRLIRRLIEESGIPYTYICCNSIA 572
+ VEP TM+ K IRR IE GIPYTY+ N A
Sbjct: 120 THAVEPAKTMFANKAKIRRAIEAEGIPYTYVSSNCFA 156
>gb|AAF64179.1|AF242496_1 phenylcoumaran benzylic ether reductase homolog TH4 [Tsuga
heterophylla]
Length = 308
Score = 140 bits (354), Expect = 9e-33
Identities = 77/158 (48%), Positives = 106/158 (66%), Gaps = 4/158 (2%)
Frame = +3
Query: 117 RILIIGATGFMGQFMTKASLGLGRSTYLLLRPGSLTPS----KAAIVKSFQDRGAKVIHG 284
R+LIIG TG++G+ + KASL LG T+LLLR TPS KA +V+SF+ GAK++HG
Sbjct: 6 RVLIIGGTGYIGRHVAKASLDLGHPTFLLLRES--TPSSNSEKAQLVESFKASGAKILHG 63
Query: 285 VINDKELMVKI*KDYEIDVVISLVGGGNLMDQRTLVDAIKSVKTVKRFLPSEFGHDTDRA 464
I D +V+ K ++DVVIS VG + +Q ++ AIK V T+KRFLPSEFG+D D+
Sbjct: 64 SIEDHASLVEAVK--QVDVVISTVGSLQIENQVNIIKAIKEVGTIKRFLPSEFGNDVDKV 121
Query: 465 NPVEPGLTMYKEKRLIRRLIEESGIPYTYICCNSIASW 578
+ VEP ++++ K +RR IE GIPYTYI N A +
Sbjct: 122 HAVEPAKSVFEVKAKVRRAIEAEGIPYTYISSNCFAGY 159
>gb|AAF64176.1|AF242493_1 phenylcoumaran benzylic ether reductase homolog TH1 [Tsuga
heterophylla]
Length = 308
Score = 139 bits (349), Expect = 3e-32
Identities = 73/156 (46%), Positives = 105/156 (66%), Gaps = 2/156 (1%)
Frame = +3
Query: 117 RILIIGATGFMGQFMTKASLGLGRSTYLLLRPGSLTPS--KAAIVKSFQDRGAKVIHGVI 290
R+LIIG TG++G+ + KASL LG T+LLLR + + + KA +V+SF+ GA ++HG I
Sbjct: 6 RVLIIGGTGYIGRHVAKASLDLGHPTFLLLRESTASSNSEKAQLVESFKASGANILHGSI 65
Query: 291 NDKELMVKI*KDYEIDVVISLVGGGNLMDQRTLVDAIKSVKTVKRFLPSEFGHDTDRANP 470
D +V+ K ++DVVIS VG + +Q ++ AIK V T+KRFLPSEFG+D D+ +
Sbjct: 66 EDHASLVEAVK--QVDVVISTVGSLQIENQVNIIKAIKEVGTIKRFLPSEFGNDVDKVHA 123
Query: 471 VEPGLTMYKEKRLIRRLIEESGIPYTYICCNSIASW 578
VEP ++++ K +RR IE GIPYTYI N A +
Sbjct: 124 VEPAKSVFEVKAKVRRAIEAEGIPYTYISSNCFAGY 159
>pir||C96783 probable NADPH oxidoreductase, 14094-12769 [imported] - Arabidopsis
thaliana gi|10092264|gb|AAG12677.1|AC025814_1 NADPH
oxidoreductase, putative; 14094-12769 [Arabidopsis
thaliana]
Length = 314
Score = 135 bits (340), Expect = 4e-31
Identities = 71/146 (48%), Positives = 97/146 (65%), Gaps = 1/146 (0%)
Frame = +3
Query: 117 RILIIGATGFMGQFMTKASLGLGRSTYLLLRPGSLT-PSKAAIVKSFQDRGAKVIHGVIN 293
+IL+IG TG++G+F+ +AS G ST+ L+R +L+ P K V+SF+D G ++HG +N
Sbjct: 7 KILVIGGTGYIGKFLVEASAKAGHSTFALVREATLSDPVKGKTVQSFKDLGVTILHGDLN 66
Query: 294 DKELMVKI*KDYEIDVVISLVGGGNLMDQRTLVDAIKSVKTVKRFLPSEFGHDTDRANPV 473
D E +VK K ++DVVIS VG ++DQ ++ AIK VKRFLPSEFG D DR + V
Sbjct: 67 DHESLVKAIK--QVDVVISTVGSMQILDQTKIISAIKEAGNVKRFLPSEFGVDVDRTSAV 124
Query: 474 EPGLTMYKEKRLIRRLIEESGIPYTY 551
EP + + K IRR IE GIPYTY
Sbjct: 125 EPAKSAFAGKIQIRRTIEAEGIPYTY 150
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 511,920,839
Number of Sequences: 1393205
Number of extensions: 10937495
Number of successful extensions: 30140
Number of sequences better than 10.0: 108
Number of HSP's better than 10.0 without gapping: 29025
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30022
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 21712003912
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
