Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005005A_C01 KMC005005A_c01
(551 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM97031.1| serine carboxypeptidase 1 precursor-like protein ... 138 1e-43
ref|NP_193027.1| SERINE CARBOXYPEPTIDASE I PRECURSOR-like protei... 138 1e-43
gb|AAF44708.1|AF242849_1 wound-inducible carboxypeptidase [Lycop... 134 5e-43
sp|P07519|CBP1_HORVU Serine carboxypeptidase I precursor (Carbox... 133 4e-39
sp|P37890|CBP1_ORYSA Serine carboxypeptidase I precursor (Carbox... 133 6e-39
>gb|AAM97031.1| serine carboxypeptidase 1 precursor-like protein [Arabidopsis
thaliana] gi|23197946|gb|AAN15500.1| serine
carboxypeptidase 1 precursor-like protein [Arabidopsis
thaliana]
Length = 497
Score = 138 bits (348), Expect(2) = 1e-43
Identities = 60/78 (76%), Positives = 66/78 (83%)
Frame = +1
Query: 316 KDPVVLWLNGGPGCSSLDGFVYEHGPFNFQAAKTKGDLPIMHINPYSWSKVSNIIYLDSP 495
KDPVVLWLNGGPGCSS+DGFVYEHGPFNF+ K LP++H+NPYSWSKVSNIIYLDSP
Sbjct: 77 KDPVVLWLNGGPGCSSMDGFVYEHGPFNFELPKKNNSLPLLHLNPYSWSKVSNIIYLDSP 136
Query: 496 GGVGLSYSKNSSKYVTDD 549
GVG SYS N S Y+T D
Sbjct: 137 VGVGFSYSNNKSDYITGD 154
Score = 60.1 bits (144), Expect(2) = 1e-43
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Frame = +3
Query: 141 LIFFV-EAAPVQALSSQNSLCFKGNFPSKHYSGYVNIDGNGENGKNLFY*FVSSERNPGE 317
L+F + E+AP AL ++ F+G FPSKHYSGYV ID E+GKNL+Y F+ SE+NP +
Sbjct: 21 LVFVITESAPESALITKLP-GFEGTFPSKHYSGYVTID--KEHGKNLWYYFIESEKNPSK 77
Query: 318 GP 323
P
Sbjct: 78 DP 79
>ref|NP_193027.1| SERINE CARBOXYPEPTIDASE I PRECURSOR-like protein; protein id:
At4g12910.1 [Arabidopsis thaliana]
gi|25289790|pir||A85139 hypothetical protein AT4g12910
[imported] - Arabidopsis thaliana
gi|5748498|emb|CAB53091.1| SERINE CARBOXYPEPTIDASE I
PRECURSOR-like protein [Arabidopsis thaliana]
gi|7267993|emb|CAB78333.1| SERINE CARBOXYPEPTIDASE I
PRECURSOR-like protein [Arabidopsis thaliana]
Length = 456
Score = 138 bits (348), Expect(2) = 1e-43
Identities = 60/78 (76%), Positives = 66/78 (83%)
Frame = +1
Query: 316 KDPVVLWLNGGPGCSSLDGFVYEHGPFNFQAAKTKGDLPIMHINPYSWSKVSNIIYLDSP 495
KDPVVLWLNGGPGCSS+DGFVYEHGPFNF+ K LP++H+NPYSWSKVSNIIYLDSP
Sbjct: 72 KDPVVLWLNGGPGCSSMDGFVYEHGPFNFELPKKNNSLPLLHLNPYSWSKVSNIIYLDSP 131
Query: 496 GGVGLSYSKNSSKYVTDD 549
GVG SYS N S Y+T D
Sbjct: 132 VGVGFSYSNNKSDYITGD 149
Score = 60.1 bits (144), Expect(2) = 1e-43
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Frame = +3
Query: 141 LIFFV-EAAPVQALSSQNSLCFKGNFPSKHYSGYVNIDGNGENGKNLFY*FVSSERNPGE 317
L+F + E+AP AL ++ F+G FPSKHYSGYV ID E+GKNL+Y F+ SE+NP +
Sbjct: 16 LVFVITESAPESALITKLP-GFEGTFPSKHYSGYVTID--KEHGKNLWYYFIESEKNPSK 72
Query: 318 GP 323
P
Sbjct: 73 DP 74
>gb|AAF44708.1|AF242849_1 wound-inducible carboxypeptidase [Lycopersicon esculentum]
Length = 498
Score = 134 bits (337), Expect(2) = 5e-43
Identities = 62/78 (79%), Positives = 63/78 (80%)
Frame = +1
Query: 316 KDPVVLWLNGGPGCSSLDGFVYEHGPFNFQAAKTKGDLPIMHINPYSWSKVSNIIYLDSP 495
KDPVVLWLNGGPGCSS DGFVYEHGPFNF K G LP +H NPYSWSKVSNIIYLDSP
Sbjct: 76 KDPVVLWLNGGPGCSSFDGFVYEHGPFNFDFGKPSGSLPSLHNNPYSWSKVSNIIYLDSP 135
Query: 496 GGVGLSYSKNSSKYVTDD 549
GVGLSYS N S Y T D
Sbjct: 136 VGVGLSYSGNKSDYNTGD 153
Score = 62.0 bits (149), Expect(2) = 5e-43
Identities = 35/71 (49%), Positives = 44/71 (61%)
Frame = +3
Query: 111 SLCIMILFDHLIFFVEAAPVQALSSQNSLCFKGNFPSKHYSGYVNIDGNGENGKNLFY*F 290
+L ++ L L E AP AL +Q F G F SKHY+GYVNID + +GKNL+Y F
Sbjct: 11 NLLLISLLAFLFLLTEGAPQSALVTQLP-GFNGTFNSKHYAGYVNIDES--HGKNLYYYF 67
Query: 291 VSSERNPGEGP 323
V SERNP + P
Sbjct: 68 VESERNPSKDP 78
>sp|P07519|CBP1_HORVU Serine carboxypeptidase I precursor (Carboxypeptidase C) (CP-MI)
gi|7428202|pir||CPBHS carboxypeptidase C (EC 3.4.16.5)
precursor - barley gi|1731988|emb|CAA70816.1| serine
carboxypeptidase I, CP-MI [Hordeum vulgare subsp.
vulgare]
Length = 499
Score = 133 bits (334), Expect(2) = 4e-39
Identities = 59/79 (74%), Positives = 66/79 (82%)
Frame = +1
Query: 313 GKDPVVLWLNGGPGCSSLDGFVYEHGPFNFQAAKTKGDLPIMHINPYSWSKVSNIIYLDS 492
GKDPVVLWLNGGPGCSS DGFVYEHGPFNF++ + LP +H+NPY+WSKVS +IYLDS
Sbjct: 78 GKDPVVLWLNGGPGCSSFDGFVYEHGPFNFESGGSVKSLPKLHLNPYAWSKVSTMIYLDS 137
Query: 493 PGGVGLSYSKNSSKYVTDD 549
P GVGLSYSKN S Y T D
Sbjct: 138 PAGVGLSYSKNVSDYETGD 156
Score = 50.1 bits (118), Expect(2) = 4e-39
Identities = 23/41 (56%), Positives = 29/41 (70%)
Frame = +3
Query: 201 FKGNFPSKHYSGYVNIDGNGENGKNLFY*FVSSERNPGEGP 323
F G PSKHY+GYV +D +G+NLFY V SER+PG+ P
Sbjct: 43 FDGALPSKHYAGYVTVDEG--HGRNLFYYVVESERDPGKDP 81
>sp|P37890|CBP1_ORYSA Serine carboxypeptidase I precursor (Carboxypeptidase C)
gi|629805|pir||S43516 carboxypeptidase C (EC 3.4.16.5)
precursor - rice gi|409580|dbj|BAA04510.1| serine
carboxypeptidase I [Oryza sativa (japonica
cultivar-group)]
Length = 510
Score = 133 bits (334), Expect(2) = 6e-39
Identities = 58/78 (74%), Positives = 67/78 (85%)
Frame = +1
Query: 316 KDPVVLWLNGGPGCSSLDGFVYEHGPFNFQAAKTKGDLPIMHINPYSWSKVSNIIYLDSP 495
KDP+VLWLNGGPGCSS DGFVYEHGPFNF++ + LP +H+NPYSWSKVS++IYLDSP
Sbjct: 85 KDPLVLWLNGGPGCSSFDGFVYEHGPFNFESGGSAKSLPKLHLNPYSWSKVSSVIYLDSP 144
Query: 496 GGVGLSYSKNSSKYVTDD 549
GVGLSYSKN+S Y T D
Sbjct: 145 AGVGLSYSKNTSDYNTGD 162
Score = 49.3 bits (116), Expect(2) = 6e-39
Identities = 26/56 (46%), Positives = 37/56 (65%)
Frame = +3
Query: 156 EAAPVQALSSQNSLCFKGNFPSKHYSGYVNIDGNGENGKNLFY*FVSSERNPGEGP 323
EAAP A+ ++ F G PSKHY+GYV ++ ++G+NLFY V SER+P + P
Sbjct: 35 EAAPASAVV-KSVPGFDGALPSKHYAGYVTVE--EQHGRNLFYYLVESERDPAKDP 87
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 530,177,918
Number of Sequences: 1393205
Number of extensions: 12171523
Number of successful extensions: 32316
Number of sequences better than 10.0: 237
Number of HSP's better than 10.0 without gapping: 30375
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31990
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 19234190289
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
