Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004996A_C01 KMC004996A_c01
(653 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T10858 probable carboxypeptidase C (EC 3.4.16.5) - mung bea... 115 7e-25
gb|AAL67992.1| putative serine carboxypeptidase precursor [Gossy... 102 6e-21
emb|CAC86383.1| carboxypeptidase type III [Theobroma cacao] 100 2e-20
gb|AAB04606.1| carboxypeptidase Y-like protein gi|445120|prf||19... 99 7e-20
emb|CAB71127.1| serine carboxipeptidase [Cicer arietinum] 91 2e-17
>pir||T10858 probable carboxypeptidase C (EC 3.4.16.5) - mung bean (fragment)
gi|1223926|gb|AAA92064.1| serine carboxypeptidase [Vigna
radiata]
Length = 294
Score = 115 bits (287), Expect = 7e-25
Identities = 69/122 (56%), Positives = 79/122 (64%), Gaps = 2/122 (1%)
Frame = -3
Query: 651 GVGEMDFVSCSSTVYSAMMQDWMRNLEVGIPTLLEDGIKVLVYAGEEDLICNWPREFK-V 475
GVG++DFVSCSSTVYSAMM+DWMRNLE GIP LLEDGIKVLVYAGEEDLICNW + V
Sbjct: 157 GVGDLDFVSCSSTVYSAMMEDWMRNLEAGIPALLEDGIKVLVYAGEEDLICNWLGNSRWV 216
Query: 474 G*CHGPGQVR-KILGHLP*SHSWLMVKKQGRR*KAHGTLLPFLKLKEAGHMAPYGSTTNA 298
GQ G +P +L+ + K+HG L FLK+ EAGHM P A
Sbjct: 217 QAMEWSGQKEFGASGAVP----FLVDGAEAGTLKSHGP-LAFLKVYEAGHMVPMDQPKAA 271
Query: 297 CT 292
T
Sbjct: 272 LT 273
Score = 44.3 bits (103), Expect = 0.001
Identities = 33/88 (37%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Frame = -1
Query: 491 LGNSRWVDAMDLVRSERFWGISHSPIPG*W*KSKDDAEKPMAPSCLSSS*RRLVT---WL 321
LGNSRWV AM+ + F P D AE S + ++ +
Sbjct: 210 LGNSRWVQAMEWSGQKEFGASGAVPF------LVDGAEAGTLKSHGPLAFLKVYEAGHMV 263
Query: 320 PMDQPQTPALEMLKSWMQGKLTIKKGGE 237
PMDQP+ AL L+SWMQGKLT+ K G+
Sbjct: 264 PMDQPKA-ALTTLRSWMQGKLTMTKNGD 290
Score = 43.1 bits (100), Expect = 0.003
Identities = 25/35 (71%), Positives = 27/35 (76%)
Frame = -2
Query: 457 WSGQKDFGASPIVPFLVDGEKARTTLKSPWHPLAF 353
WSGQK+FGAS VPFLVDG +A TLKS PLAF
Sbjct: 221 WSGQKEFGASGAVPFLVDGAEA-GTLKS-HGPLAF 253
>gb|AAL67992.1| putative serine carboxypeptidase precursor [Gossypium hirsutum]
Length = 507
Score = 102 bits (253), Expect = 6e-21
Identities = 60/113 (53%), Positives = 72/113 (63%), Gaps = 2/113 (1%)
Frame = -3
Query: 651 GVGEMDFVSCSSTVYSAMMQDWMRNLEVGIPTLLEDGIKVLVYAGEEDLICNWPREFK-V 475
GVG +DFVSCS TVY AM+ DWMRNLEVGIP LLEDGIK+LVYAGE DLICNW + V
Sbjct: 368 GVGNIDFVSCSPTVYQAMLVDWMRNLEVGIPVLLEDGIKLLVYAGEYDLICNWLGNSRWV 427
Query: 474 G*CHGPGQVRKILG-HLP*SHSWLMVKKQGRR*KAHGTLLPFLKLKEAGHMAP 319
GQ + +P +++ + K HG L FLK+ +AGHM P
Sbjct: 428 HAMEWSGQKEFVASPEVP----FIVDGAEAGVLKTHGA-LGFLKVHDAGHMVP 475
Score = 38.1 bits (87), Expect = 0.10
Identities = 16/22 (72%), Positives = 19/22 (85%)
Frame = -2
Query: 457 WSGQKDFGASPIVPFLVDGEKA 392
WSGQK+F ASP VPF+VDG +A
Sbjct: 432 WSGQKEFVASPEVPFIVDGAEA 453
Score = 34.7 bits (78), Expect = 1.2
Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 3/90 (3%)
Frame = -1
Query: 491 LGNSRWVDAMDLVRSERFWGISHSPIPG*W*KSKDDAEKPMAPSCLSSS*RRLVT---WL 321
LGNSRWV AM+ + F P D AE + + + ++ +
Sbjct: 421 LGNSRWVHAMEWSGQKEFVASPEVPF------IVDGAEAGVLKTHGALGFLKVHDAGHMV 474
Query: 320 PMDQPQTPALEMLKSWMQGKLTIKKGGENV 231
PMDQP+ ALEMLK W +G L+ E +
Sbjct: 475 PMDQPKA-ALEMLKRWTKGTLSDASDSEKL 503
>emb|CAC86383.1| carboxypeptidase type III [Theobroma cacao]
Length = 508
Score = 100 bits (248), Expect = 2e-20
Identities = 58/113 (51%), Positives = 72/113 (63%), Gaps = 2/113 (1%)
Frame = -3
Query: 651 GVGEMDFVSCSSTVYSAMMQDWMRNLEVGIPTLLEDGIKVLVYAGEEDLICNWPREFK-V 475
GVG +DFVSCS TVY AM+ DWMRNLEVGIP LLEDG+K+LVYAGE DLICNW + V
Sbjct: 369 GVGSIDFVSCSPTVYQAMLVDWMRNLEVGIPALLEDGVKLLVYAGEYDLICNWLGNSRWV 428
Query: 474 G*CHGPGQVRKILG-HLP*SHSWLMVKKQGRR*KAHGTLLPFLKLKEAGHMAP 319
GQ + +P +++ + + HG L FLK+ +AGHM P
Sbjct: 429 HAMEWSGQKEFVASPEVP----FVVDGSEAGVLRTHGP-LGFLKVHDAGHMVP 476
Score = 38.1 bits (87), Expect = 0.10
Identities = 16/22 (72%), Positives = 19/22 (85%)
Frame = -2
Query: 457 WSGQKDFGASPIVPFLVDGEKA 392
WSGQK+F ASP VPF+VDG +A
Sbjct: 433 WSGQKEFVASPEVPFVVDGSEA 454
Score = 34.3 bits (77), Expect = 1.5
Identities = 28/94 (29%), Positives = 37/94 (38%), Gaps = 15/94 (15%)
Frame = -1
Query: 491 LGNSRWVDAMDLVRSERFWGISHSPIPG*W*KSKDDAEKPMAPSCLSSS*RRLVT----- 327
LGNSRWV AM+ W K+ P P + S ++
Sbjct: 422 LGNSRWVHAME------------------WSGQKEFVASPEVPFVVDGSEAGVLRTHGPL 463
Query: 326 ----------WLPMDQPQTPALEMLKSWMQGKLT 255
+PMDQP+ ALEMLK W +G L+
Sbjct: 464 GFLKVHDAGHMVPMDQPKA-ALEMLKRWTKGTLS 496
>gb|AAB04606.1| carboxypeptidase Y-like protein gi|445120|prf||1908426A
carboxypeptidase Y
Length = 539
Score = 98.6 bits (244), Expect = 7e-20
Identities = 57/113 (50%), Positives = 74/113 (65%), Gaps = 2/113 (1%)
Frame = -3
Query: 651 GVGEMDFVSCSSTVYSAMMQDWMRNLEVGIPTLLEDGIKVLVYAGEEDLICNWPREFK-V 475
GVG++DFVSCS++VY AM+ DWMRNLEVGIPTLLEDGI +LVYAGE DLICNW + V
Sbjct: 370 GVGDIDFVSCSTSVYQAMLVDWMRNLEVGIPTLLEDGISLLVYAGEYDLICNWLGNSRWV 429
Query: 474 G*CHGPGQVR-KILGHLP*SHSWLMVKKQGRR*KAHGTLLPFLKLKEAGHMAP 319
G+ +P +++ K+ K + L FLK+++AGHM P
Sbjct: 430 NAMEWSGKTNFGAAKEVP----FIVDGKEAGLLKTY-EQLSFLKVRDAGHMVP 477
Score = 34.7 bits (78), Expect = 1.2
Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Frame = -1
Query: 491 LGNSRWVDAMDLVRSERFWGISHSPIPG*W*KSKDDAEKPMAPSCLSSS*RRLVT---WL 321
LGNSRWV+AM+ F P D E + + S ++ +
Sbjct: 423 LGNSRWVNAMEWSGKTNFGAAKEVPF------IVDGKEAGLLKTYEQLSFLKVRDAGHMV 476
Query: 320 PMDQPQTPALEMLKSWMQGKL 258
PMDQP+ AL+MLK WM+ L
Sbjct: 477 PMDQPKA-ALKMLKRWMENSL 496
Score = 33.9 bits (76), Expect = 2.0
Identities = 13/22 (59%), Positives = 19/22 (86%)
Frame = -2
Query: 457 WSGQKDFGASPIVPFLVDGEKA 392
WSG+ +FGA+ VPF+VDG++A
Sbjct: 434 WSGKTNFGAAKEVPFIVDGKEA 455
>emb|CAB71127.1| serine carboxipeptidase [Cicer arietinum]
Length = 360
Score = 90.5 bits (223), Expect = 2e-17
Identities = 54/112 (48%), Positives = 69/112 (61%), Gaps = 1/112 (0%)
Frame = -3
Query: 651 GVGEMDFVSCSSTVYSAMMQDWMRNLEVGIPTLLEDGIKVLVYAGEEDLICNWPREFK-V 475
GV ++ FVSCS+ VY AM+ DWMRNLEVGIP LLEDGI +LVYAGE DLICNW + V
Sbjct: 220 GVAKISFVSCSTEVYIAMLVDWMRNLEVGIPILLEDGINLLVYAGEYDLICNWLGNSRWV 279
Query: 474 G*CHGPGQVRKILGHLP*SHSWLMVKKQGRR*KAHGTLLPFLKLKEAGHMAP 319
GQ + + +++ + K +G L FLK+ +AGHM P
Sbjct: 280 HAMEWSGQKKFVASP---DVPFVVNGSEAGLLKNYGP-LSFLKVYDAGHMVP 327
Score = 38.9 bits (89), Expect = 0.061
Identities = 31/85 (36%), Positives = 41/85 (47%)
Frame = -1
Query: 491 LGNSRWVDAMDLVRSERFWGISHSPIPG*W*KSKDDAEKPMAPSCLSSS*RRLVTWLPMD 312
LGNSRWV AM+ ++F ++ +P S+ K P +PMD
Sbjct: 273 LGNSRWVHAMEWSGQKKF--VASPDVPFVVNGSEAGLLKNYGPLSFLKV-YDAGHMVPMD 329
Query: 311 QPQTPALEMLKSWMQGKLTIKKGGE 237
QP+ ALEMLK W +G L K GE
Sbjct: 330 QPKA-ALEMLKKWTRGTLAESKVGE 353
Score = 36.2 bits (82), Expect = 0.40
Identities = 19/35 (54%), Positives = 24/35 (68%)
Frame = -2
Query: 457 WSGQKDFGASPIVPFLVDGEKARTTLKSPWHPLAF 353
WSGQK F ASP VPF+V+G +A L + PL+F
Sbjct: 284 WSGQKKFVASPDVPFVVNGSEA--GLLKNYGPLSF 316
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 638,546,925
Number of Sequences: 1393205
Number of extensions: 14923981
Number of successful extensions: 32923
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 31757
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32885
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 28144814643
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
