Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004979A_C01 KMC004979A_c01
(899 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAB36558.2| receptor-like protein kinase INRPK1 [Ipomoea nil] 160 2e-38
pir||T18536 receptor-like protein kinase - Ipomoea nil (Japanese... 160 2e-38
gb|AAG52992.2| receptor-like protein kinase INRPK1a [Ipomoea nil] 160 2e-38
gb|AAG52994.1| receptor-like protein kinase INRPK1c [Ipomoea nil] 160 2e-38
ref|NP_177451.1| leucine-rich repeat transmembrane protein kinas... 126 5e-28
>gb|AAB36558.2| receptor-like protein kinase INRPK1 [Ipomoea nil]
Length = 1109
Score = 160 bits (406), Expect = 2e-38
Identities = 81/134 (60%), Positives = 100/134 (74%)
Frame = -3
Query: 897 ASTSNPSICVPGTIGYIAPENAYTAANSRESDVYSYGVVLLALITRKKAVDPSFVEGTDI 718
++TS PS V GTIGY+APENA+T SRESDVYSYGVVLL LITRKKA+DPSF TDI
Sbjct: 970 SATSIPSNTVQGTIGYMAPENAFTTVKSRESDVYSYGVVLLELITRKKALDPSFNGETDI 1029
Query: 717 VSWVRSVWNETGEINQVVDSSLSEEFLDTHKMENATKVLVVALRCTEQDPRRRPTMTDVT 538
V WVRSVW +TGEI ++VD SL +E +D+ ME T+ L +ALRC E++ +RPTM DV
Sbjct: 1030 VGWVRSVWTQTGEIQKIVDPSLLDELIDSSVMEQVTEALSLALRCAEKEVDKRPTMRDVV 1089
Query: 537 KQLSDADLRQRTRS 496
KQL+ +R + S
Sbjct: 1090 KQLTRWSIRSYSSS 1103
>pir||T18536 receptor-like protein kinase - Ipomoea nil (Japanese morning glory)
Length = 1109
Score = 160 bits (406), Expect = 2e-38
Identities = 81/134 (60%), Positives = 100/134 (74%)
Frame = -3
Query: 897 ASTSNPSICVPGTIGYIAPENAYTAANSRESDVYSYGVVLLALITRKKAVDPSFVEGTDI 718
++TS PS V GTIGY+APENA+T SRESDVYSYGVVLL LITRKKA+DPSF TDI
Sbjct: 970 SATSIPSNTVQGTIGYMAPENAFTTVKSRESDVYSYGVVLLELITRKKALDPSFNGETDI 1029
Query: 717 VSWVRSVWNETGEINQVVDSSLSEEFLDTHKMENATKVLVVALRCTEQDPRRRPTMTDVT 538
V WVRSVW +TGEI ++VD SL +E +D+ ME T+ L +ALRC E++ +RPTM DV
Sbjct: 1030 VGWVRSVWTQTGEIQKIVDPSLLDELIDSSVMEQVTEALSLALRCAEKEVDKRPTMRDVV 1089
Query: 537 KQLSDADLRQRTRS 496
KQL+ +R + S
Sbjct: 1090 KQLTRWSIRSYSSS 1103
>gb|AAG52992.2| receptor-like protein kinase INRPK1a [Ipomoea nil]
Length = 647
Score = 160 bits (406), Expect = 2e-38
Identities = 81/134 (60%), Positives = 100/134 (74%)
Frame = -3
Query: 897 ASTSNPSICVPGTIGYIAPENAYTAANSRESDVYSYGVVLLALITRKKAVDPSFVEGTDI 718
++TS PS V GTIGY+APENA+T SRESDVYSYGVVLL LITRKKA+DPSF TDI
Sbjct: 508 SATSIPSNTVQGTIGYMAPENAFTTVKSRESDVYSYGVVLLELITRKKALDPSFNGETDI 567
Query: 717 VSWVRSVWNETGEINQVVDSSLSEEFLDTHKMENATKVLVVALRCTEQDPRRRPTMTDVT 538
V WVRSVW +TGEI ++VD SL +E +D+ ME T+ L +ALRC E++ +RPTM DV
Sbjct: 568 VGWVRSVWTQTGEIQKIVDPSLLDELIDSSVMEQVTEALSLALRCAEKEVDKRPTMRDVV 627
Query: 537 KQLSDADLRQRTRS 496
KQL+ +R + S
Sbjct: 628 KQLTRWSIRSYSSS 641
>gb|AAG52994.1| receptor-like protein kinase INRPK1c [Ipomoea nil]
Length = 443
Score = 160 bits (406), Expect = 2e-38
Identities = 81/134 (60%), Positives = 100/134 (74%)
Frame = -3
Query: 897 ASTSNPSICVPGTIGYIAPENAYTAANSRESDVYSYGVVLLALITRKKAVDPSFVEGTDI 718
++TS PS V GTIGY+APENA+T SRESDVYSYGVVLL LITRKKA+DPSF TDI
Sbjct: 304 SATSIPSNTVQGTIGYMAPENAFTTVKSRESDVYSYGVVLLELITRKKALDPSFNGETDI 363
Query: 717 VSWVRSVWNETGEINQVVDSSLSEEFLDTHKMENATKVLVVALRCTEQDPRRRPTMTDVT 538
V WVRSVW +TGEI ++VD SL +E +D+ ME T+ L +ALRC E++ +RPTM DV
Sbjct: 364 VGWVRSVWTQTGEIQKIVDPSLLDELIDSSVMEQVTEALSLALRCAEKEVDKRPTMRDVV 423
Query: 537 KQLSDADLRQRTRS 496
KQL+ +R + S
Sbjct: 424 KQLTRWSIRSYSSS 437
>ref|NP_177451.1| leucine-rich repeat transmembrane protein kinase, putative; protein
id: At1g73080.1 [Arabidopsis thaliana]
gi|25406249|pir||D96756 receptor-like protein kinase
homolog [imported] - Arabidopsis thaliana
gi|5903097|gb|AAD55655.1|AC008017_28 Highly similar to
receptor-like protein kinase [Arabidopsis thaliana]
Length = 1123
Score = 126 bits (316), Expect = 5e-28
Identities = 66/121 (54%), Positives = 78/121 (63%), Gaps = 5/121 (4%)
Frame = -3
Query: 870 VPGTIGYIAPENAYTAANSRESDVYSYGVVLLALITRKKAVDPSFVEGTDIVSWVRSVWN 691
V GT GYIAPENA+ RESDVYSYGVVLL L+TRK+AVD SF E TDIVSWVRS +
Sbjct: 989 VTGTTGYIAPENAFKTVRGRESDVYSYGVVLLELVTRKRAVDKSFPESTDIVSWVRSALS 1048
Query: 690 ETGE-----INQVVDSSLSEEFLDTHKMENATKVLVVALRCTEQDPRRRPTMTDVTKQLS 526
+ + +VD L +E LD+ E +V +AL CT+QDP RPTM D K L
Sbjct: 1049 SSNNNVEDMVTTIVDPILVDELLDSSLREQVMQVTELALSCTQQDPAMRPTMRDAVKLLE 1108
Query: 525 D 523
D
Sbjct: 1109 D 1109
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 756,746,086
Number of Sequences: 1393205
Number of extensions: 16071561
Number of successful extensions: 41335
Number of sequences better than 10.0: 1973
Number of HSP's better than 10.0 without gapping: 38552
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40246
length of database: 448,689,247
effective HSP length: 122
effective length of database: 278,718,237
effective search space used: 49333127949
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
