KMC004962A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KMC004962A_C01 KMC004962A_c01
gactagaaagatacaaaacataatattACACGAAATTTAAATTGTAAATAACAATAATGA
GTCACCCGGTGCAGGGCACGGGTAATTCCGCTAGTAATTACATAAAAAACTTATTCAATT
CCAAACAGGAGATTTTGGAATTGTATTAGGCACTAAATAGATATAACATTTCTGAAAGAA
ACGTCATTTACACGTGAAATGAAATAATATTGAAGTTGAAGAGCATTACTTCCTTTCGTT
ATGGTAATATTTAACAATGTAGTCCATTTATGGGGATATTACATTTTGTTAATTAACTGA
AATAGGAAGAATGGATCATTGGTCTATAAGCCACAATATTAAGAGAACTTTTCACTAATT
CATTTCAGTCCATTAGTTTGTATCTTTTCTCTTGGACACCAGTAACTCCCATTTGTATCT
CAATTATTGTATGAAGAGGCATCTCAATATGTGGAATTTCTTTCAAAGGCCTATCAGCAA
AATAAGCATATAATGCCCTCAAAACTGCCTGGTGAGATATCACAACAACCGGCGCTCGTT
GTCGCTCAAGCTCAATAATTACAGGTTCCAACCTTTGAATGACATCCAAATACGACTCCC
CACGAGGATATCGATATCTAAGCTTGTCCTTCTTGCGGG


Nr search

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC004962A_C01 KMC004962A_c01
         (639 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

dbj|BAB55655.1| fructose-6-phosphate 2-kinase/fructose-2,6-bisph...   178  6e-44
pir||T08994 6-phosphofructo-2-kinase (EC 2.7.1.105) / fructose-2...   177  8e-44
gb|AAF04293.2|AF190739_1 fructose-6-phosphate 2-kinase/fructose-...   176  2e-43
ref|NP_172191.1| fructose-2,6-bisphosphatase, putative; protein ...   176  2e-43
gb|AAM91549.1| fructose-2,6-bisphosphatase, putative [Arabidopsi...   176  2e-43

>dbj|BAB55655.1| fructose-6-phosphate 2-kinase/fructose-2,6-bisphosphatase
           [Bruguiera gymnorrhiza]
          Length = 745

 Score =  178 bits (451), Expect = 6e-44
 Identities = 88/90 (97%), Positives = 90/90 (99%)
 Frame = -3

Query: 637 RKKDKLRYRYPRGESYLDVIQRLEPVIIELERQRAPVVVISHQAVLRALYAYFADRPLKE 458
           RKKDKLRYRYPRGESYLDVIQRLEPVIIELERQRAPVVVISHQAVLRALYAYFADRPL+E
Sbjct: 656 RKKDKLRYRYPRGESYLDVIQRLEPVIIELERQRAPVVVISHQAVLRALYAYFADRPLRE 715

Query: 457 IPHIEMPLHTIIEIQMGVTGVQEKRYKLMD 368
           IPHIE+PLHTIIEIQMGVTGVQEKRYKLMD
Sbjct: 716 IPHIEVPLHTIIEIQMGVTGVQEKRYKLMD 745

>pir||T08994 6-phosphofructo-2-kinase (EC 2.7.1.105) / fructose-2,
           6-bisphosphate 2-phosphatase (EC 3.1.3.46) - spinach
           gi|3170230|gb|AAC18055.1| fructose-6-phosphate 2-kinase
           /fructose-2,6-bisphosphatase [Spinacia oleracea]
          Length = 750

 Score =  177 bits (450), Expect = 8e-44
 Identities = 88/90 (97%), Positives = 90/90 (99%)
 Frame = -3

Query: 637 RKKDKLRYRYPRGESYLDVIQRLEPVIIELERQRAPVVVISHQAVLRALYAYFADRPLKE 458
           R+KDKLRYRYPRGESYLDVIQRLEPVIIELERQRAPVVVISHQAVLRALYAYFADRPLKE
Sbjct: 661 REKDKLRYRYPRGESYLDVIQRLEPVIIELERQRAPVVVISHQAVLRALYAYFADRPLKE 720

Query: 457 IPHIEMPLHTIIEIQMGVTGVQEKRYKLMD 368
           IPHIE+PLHTIIEIQMGVTGVQEKRYKLMD
Sbjct: 721 IPHIEVPLHTIIEIQMGVTGVQEKRYKLMD 750

>gb|AAF04293.2|AF190739_1 fructose-6-phosphate 2-kinase/fructose-2,6-bisphosphatase
           [Arabidopsis thaliana]
          Length = 744

 Score =  176 bits (446), Expect = 2e-43
 Identities = 88/90 (97%), Positives = 89/90 (98%)
 Frame = -3

Query: 637 RKKDKLRYRYPRGESYLDVIQRLEPVIIELERQRAPVVVISHQAVLRALYAYFADRPLKE 458
           RKKDKLRYRYPRGESYLDVIQRLEPVIIELERQRAPVVVISHQAVLRALYAYFADRPLKE
Sbjct: 655 RKKDKLRYRYPRGESYLDVIQRLEPVIIELERQRAPVVVISHQAVLRALYAYFADRPLKE 714

Query: 457 IPHIEMPLHTIIEIQMGVTGVQEKRYKLMD 368
           IP IEMPLHTIIEIQMGV+GVQEKRYKLMD
Sbjct: 715 IPQIEMPLHTIIEIQMGVSGVQEKRYKLMD 744

>ref|NP_172191.1| fructose-2,6-bisphosphatase, putative; protein id: At1g07110.1,
           supported by cDNA: gi_13096097, supported by cDNA:
           gi_8117171 [Arabidopsis thaliana]
           gi|8117172|dbj|BAA96353.1|
           fructose-6-phosphate,2-kinase/fructose-2,
           6-bisphosphatase [Arabidopsis thaliana]
          Length = 744

 Score =  176 bits (446), Expect = 2e-43
 Identities = 88/90 (97%), Positives = 89/90 (98%)
 Frame = -3

Query: 637 RKKDKLRYRYPRGESYLDVIQRLEPVIIELERQRAPVVVISHQAVLRALYAYFADRPLKE 458
           RKKDKLRYRYPRGESYLDVIQRLEPVIIELERQRAPVVVISHQAVLRALYAYFADRPLKE
Sbjct: 655 RKKDKLRYRYPRGESYLDVIQRLEPVIIELERQRAPVVVISHQAVLRALYAYFADRPLKE 714

Query: 457 IPHIEMPLHTIIEIQMGVTGVQEKRYKLMD 368
           IP IEMPLHTIIEIQMGV+GVQEKRYKLMD
Sbjct: 715 IPQIEMPLHTIIEIQMGVSGVQEKRYKLMD 744

>gb|AAM91549.1| fructose-2,6-bisphosphatase, putative [Arabidopsis thaliana]
          Length = 355

 Score =  176 bits (446), Expect = 2e-43
 Identities = 88/90 (97%), Positives = 89/90 (98%)
 Frame = -3

Query: 637 RKKDKLRYRYPRGESYLDVIQRLEPVIIELERQRAPVVVISHQAVLRALYAYFADRPLKE 458
           RKKDKLRYRYPRGESYLDVIQRLEPVIIELERQRAPVVVISHQAVLRALYAYFADRPLKE
Sbjct: 266 RKKDKLRYRYPRGESYLDVIQRLEPVIIELERQRAPVVVISHQAVLRALYAYFADRPLKE 325

Query: 457 IPHIEMPLHTIIEIQMGVTGVQEKRYKLMD 368
           IP IEMPLHTIIEIQMGV+GVQEKRYKLMD
Sbjct: 326 IPQIEMPLHTIIEIQMGVSGVQEKRYKLMD 355

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 518,922,288
Number of Sequences: 1393205
Number of extensions: 10589297
Number of successful extensions: 19793
Number of sequences better than 10.0: 131
Number of HSP's better than 10.0 without gapping: 19257
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19708
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 26723359358
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)


EST assemble image


clone accession position
1 MWL073g06_f AV769901 1 473
2 MRL038d07_f BP085590 28 472
3 MWM078d08_f AV765983 43 309
4 MFBL007d09_f BP041625 105 622
5 MFB041d10_f BP036985 176 639
6 MFBL027c06_f BP042617 206 592




Lotus japonicus
Kazusa DNA Research Institute