Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004950A_C01 KMC004950A_c01
(591 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_198644.1| receptor serine/threonine kinase PR5K; protein ... 83 2e-15
gb|AAC49208.1| receptor serine/threonine kinase PR5K gi|1589714|... 82 7e-15
dbj|BAB17348.1| putative receptor kinase [Oryza sativa (japonica... 79 3e-14
ref|NP_198719.1| receptor protein kinase - like protein; protein... 78 1e-13
dbj|BAB17339.1| putative receptor kinase [Oryza sativa (japonica... 77 2e-13
>ref|NP_198644.1| receptor serine/threonine kinase PR5K; protein id: At5g38280.1,
supported by cDNA: gi_1235679 [Arabidopsis thaliana]
gi|10177803|dbj|BAB11294.1| receptor serine/threonine
kinase [Arabidopsis thaliana]
Length = 665
Score = 83.2 bits (204), Expect = 2e-15
Identities = 42/92 (45%), Positives = 61/92 (65%), Gaps = 1/92 (1%)
Frame = -3
Query: 589 FPFWIYDQFQEGKDVEM-EEYASEEGKALAKKIFMVALWCVQFKPSDRPSMKKVVEMLEG 413
FP W+Y F++G+ + + ++E + +AKK+ +VALWC+Q PSDRP M KV+EMLEG
Sbjct: 548 FPEWVYKDFEKGEITRIFGDSITDEEEKIAKKLVLVALWCIQMNPSDRPPMIKVIEMLEG 607
Query: 412 PIESLEMPPARPSFYPSETFKHDGGSNSDRTS 317
+E+L++PP F P ET D +SD TS
Sbjct: 608 NLEALQVPPNPLLFSPEETVP-DTLEDSDDTS 638
>gb|AAC49208.1| receptor serine/threonine kinase PR5K gi|1589714|prf||2211427A
receptor protein kinase
Length = 665
Score = 81.6 bits (200), Expect = 7e-15
Identities = 43/92 (46%), Positives = 58/92 (62%), Gaps = 1/92 (1%)
Frame = -3
Query: 589 FPFWIYDQFQEGKDVEM-EEYASEEGKALAKKIFMVALWCVQFKPSDRPSMKKVVEMLEG 413
FP W+Y F++G+ + +EE + AKK+ +VALWC+Q PSDRP M KV EMLEG
Sbjct: 548 FPEWVYKDFEKGEITRIFGNSITEEEEKFAKKLVLVALWCIQMNPSDRPPMIKVTEMLEG 607
Query: 412 PIESLEMPPARPSFYPSETFKHDGGSNSDRTS 317
+E+L++PP F P ET D +SD TS
Sbjct: 608 NLEALQVPPNPLLFSPEETVP-DTLEDSDDTS 638
>dbj|BAB17348.1| putative receptor kinase [Oryza sativa (japonica cultivar-group)]
gi|14090209|dbj|BAB55470.1| putative receptor kinase
[Oryza sativa (japonica cultivar-group)]
Length = 636
Score = 79.3 bits (194), Expect = 3e-14
Identities = 35/73 (47%), Positives = 54/73 (73%)
Frame = -3
Query: 589 FPFWIYDQFQEGKDVEMEEYASEEGKALAKKIFMVALWCVQFKPSDRPSMKKVVEMLEGP 410
FP WIY+Q G+D+E+ +EE KA+ +++ +VALWC+Q+ P +RPSM KVV ML G
Sbjct: 548 FPEWIYEQVTIGQDLELGREMTEEEKAIMRQLAIVALWCIQWNPKNRPSMTKVVNMLTGR 607
Query: 409 IESLEMPPARPSF 371
+++L++PP +P F
Sbjct: 608 LQNLQVPP-KPFF 619
>ref|NP_198719.1| receptor protein kinase - like protein; protein id: At5g39030.1
[Arabidopsis thaliana] gi|10177548|dbj|BAB10827.1|
receptor protein kinase-like protein [Arabidopsis
thaliana]
Length = 806
Score = 77.8 bits (190), Expect = 1e-13
Identities = 41/90 (45%), Positives = 59/90 (65%), Gaps = 2/90 (2%)
Frame = -3
Query: 589 FPFWIYDQFQEGKDVEM--EEYASEEGKALAKKIFMVALWCVQFKPSDRPSMKKVVEMLE 416
FP WIY ++G+ + +E EE K +AKK+ +V LWC+Q PSDRPSM +VVEM+E
Sbjct: 714 FPDWIYKDLEDGEQTWIFGDEITKEE-KEIAKKMIVVGLWCIQPCPSDRPSMNRVVEMME 772
Query: 415 GPIESLEMPPARPSFYPSETFKHDGGSNSD 326
G +++LE+PP +PS + S + S SD
Sbjct: 773 GSLDALEIPP-KPSMHISTEVITESSSLSD 801
>dbj|BAB17339.1| putative receptor kinase [Oryza sativa (japonica cultivar-group)]
gi|14090200|dbj|BAB55461.1| putative receptor kinase
[Oryza sativa (japonica cultivar-group)]
Length = 344
Score = 77.0 bits (188), Expect = 2e-13
Identities = 32/68 (47%), Positives = 50/68 (73%)
Frame = -3
Query: 589 FPFWIYDQFQEGKDVEMEEYASEEGKALAKKIFMVALWCVQFKPSDRPSMKKVVEMLEGP 410
FP WIY+Q G+D+ + +EE KA +++ +VALWC+Q+ P++RPSM KVV ML G
Sbjct: 265 FPEWIYEQVTAGQDLALGREMTEEEKATTRQLAIVALWCIQWNPNNRPSMTKVVNMLTGR 324
Query: 409 IESLEMPP 386
+++L++PP
Sbjct: 325 LQNLQVPP 332
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 472,087,672
Number of Sequences: 1393205
Number of extensions: 9273386
Number of successful extensions: 21945
Number of sequences better than 10.0: 419
Number of HSP's better than 10.0 without gapping: 21357
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21904
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 22569056698
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
