Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004916A_C01 KMC004916A_c01
(347 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD40979.1|AF089851_1 peroxisomal copper-containing amine oxi... 90 8e-18
ref|NP_181777.1| putative copper amine oxidase; protein id: At2g... 66 1e-10
gb|AAM53275.1| putative copper amine oxidase [Arabidopsis thalia... 66 1e-10
gb|AAK74151.1| putative monoamine oxidase [Phytophthora cinnamomi] 49 2e-05
sp|P46881|PAOX_ARTGO Phenylethylamine oxidase precursor (Amine o... 44 4e-04
>gb|AAD40979.1|AF089851_1 peroxisomal copper-containing amine oxidase [Glycine max]
Length = 701
Score = 89.7 bits (221), Expect = 8e-18
Identities = 40/51 (78%), Positives = 46/51 (89%)
Frame = -3
Query: 345 MPVDHIGFMLMPHGFFDSSPAVDVPPSPGDLDDKDLGVPAKPVQNGLIAKL 193
MPV+ IGFMLMPHGFF+ SPAVDVPP+ DLDDK+ G+PAKP+QNGLIAKL
Sbjct: 651 MPVERIGFMLMPHGFFNCSPAVDVPPNQSDLDDKENGLPAKPIQNGLIAKL 701
>ref|NP_181777.1| putative copper amine oxidase; protein id: At2g42490.1 [Arabidopsis
thaliana] gi|25314767|pir||E84854 probable copper amine
oxidase [imported] - Arabidopsis thaliana
gi|4567319|gb|AAD23730.1| putative copper amine oxidase
[Arabidopsis thaliana] gi|20198078|gb|AAM15387.1|
putative copper amine oxidase [Arabidopsis thaliana]
Length = 759
Score = 66.2 bits (160), Expect = 1e-10
Identities = 32/55 (58%), Positives = 41/55 (74%), Gaps = 4/55 (7%)
Frame = -3
Query: 345 MPVDHIGFMLMPHGFFDSSPAVDVPPSPGDLDDKDLG----VPAKPVQNGLIAKL 193
MPV+HIGF LMPHGFF+ SPAVDVPP+P +L+ K+ V K +Q GL++KL
Sbjct: 705 MPVEHIGFTLMPHGFFNCSPAVDVPPNPCELETKESEVKEVVAPKALQTGLLSKL 759
>gb|AAM53275.1| putative copper amine oxidase [Arabidopsis thaliana]
gi|23197642|gb|AAN15348.1| putative copper amine oxidase
[Arabidopsis thaliana]
Length = 776
Score = 66.2 bits (160), Expect = 1e-10
Identities = 32/55 (58%), Positives = 41/55 (74%), Gaps = 4/55 (7%)
Frame = -3
Query: 345 MPVDHIGFMLMPHGFFDSSPAVDVPPSPGDLDDKDLG----VPAKPVQNGLIAKL 193
MPV+HIGF LMPHGFF+ SPAVDVPP+P +L+ K+ V K +Q GL++KL
Sbjct: 722 MPVEHIGFTLMPHGFFNCSPAVDVPPNPCELETKESEVKEVVAPKALQTGLLSKL 776
>gb|AAK74151.1| putative monoamine oxidase [Phytophthora cinnamomi]
Length = 75
Score = 48.5 bits (114), Expect = 2e-05
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = -3
Query: 345 MPVDHIGFMLMPHGFFDSSPAVDVPPSPGDLDDKDL 238
MPVD+ GF L+P GFFD +P +DVP P D DL
Sbjct: 26 MPVDYAGFKLVPEGFFDRNPTLDVPEDPNGKDSSDL 61
>sp|P46881|PAOX_ARTGO Phenylethylamine oxidase precursor (Amine oxidase)
gi|541450|pir||JC2139 phenylethylamine oxidase (EC
1.4.3.-) - Arthrobacter globiformis gi|2981718|pdb|1AVK|
Crystal Structures Of The Copper-Containing Amine
Oxidase From Arthrobacter Globiformis In The Holo- And
Apo-Forms: Implications For The Biogenesis Of Topa
Quinone gi|22218800|pdb|1IVU|A Chain A, Crystal
Structure Of Copper Amine Oxidase From Arthrobacter
Globiformis: Initial Intermediate In Topaquinone
Biogenesis gi|22218801|pdb|1IVU|B Chain B, Crystal
Structure Of Copper Amine Oxidase From Arthrobacter
Globiformis: Initial Intermediate In Topaquinone
Biogenesis gi|451489|gb|AAA18114.1| phenylethylamine
oxidase; monoamine oxidase
Length = 638
Score = 44.3 bits (103), Expect = 4e-04
Identities = 18/28 (64%), Positives = 21/28 (74%)
Frame = -3
Query: 345 MPVDHIGFMLMPHGFFDSSPAVDVPPSP 262
MPVD +GF L P GFFD SP +DVP +P
Sbjct: 602 MPVDTVGFKLRPEGFFDRSPVLDVPANP 629
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 320,296,934
Number of Sequences: 1393205
Number of extensions: 6606359
Number of successful extensions: 16781
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 16377
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16774
length of database: 448,689,247
effective HSP length: 91
effective length of database: 321,907,592
effective search space used: 7725782208
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
