Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004909A_C01 KMC004909A_c01
(907 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_190276.1| protein kinase - like protein; protein id: At3g... 176 4e-43
dbj|BAC22257.1| contains EST D23238(C2469)~kinase-like protein [... 168 9e-41
ref|NP_173077.1| putative Ser/Thr protein kinase; protein id: At... 159 7e-38
ref|NP_189116.1| protein kinase, putative; protein id: At3g24720... 158 1e-37
ref|NP_171964.1| putative Ser/Thr protein kinase; protein id: At... 157 2e-37
>ref|NP_190276.1| protein kinase - like protein; protein id: At3g46920.1 [Arabidopsis
thaliana] gi|7487762|pir||T12956 hypothetical protein
T6H20.50 - Arabidopsis thaliana
gi|5541667|emb|CAB51173.1| putative protein [Arabidopsis
thaliana]
Length = 1171
Score = 176 bits (446), Expect = 4e-43
Identities = 81/109 (74%), Positives = 95/109 (86%)
Frame = -2
Query: 906 APELLNGSSSLVSEKVDVFSFGIVMWELLTGEEPYADLHYGAIIGGIVNNTLRPPVPESC 727
APELLNG+SSLVSEKVDVFSFGIV+WEL TGEEPYADLHYGAIIGGIV+NTLRP +P+ C
Sbjct: 1063 APELLNGTSSLVSEKVDVFSFGIVLWELFTGEEPYADLHYGAIIGGIVSNTLRPQIPDFC 1122
Query: 726 DPDWKVLMEKCWSSEPSERPTFTEIASELRSIGSKISPKGQNQQQQPAS 580
D DWK+LME+CWS+EPSERP+FTEI +ELR++ +K+ K Q Q P S
Sbjct: 1123 DMDWKLLMERCWSAEPSERPSFTEIVNELRTMATKLPSKEQGSTQGPQS 1171
>dbj|BAC22257.1| contains EST D23238(C2469)~kinase-like protein [Oryza sativa
(japonica cultivar-group)]
Length = 1270
Score = 168 bits (426), Expect = 9e-41
Identities = 83/104 (79%), Positives = 92/104 (87%)
Frame = -2
Query: 906 APELLNGSSSLVSEKVDVFSFGIVMWELLTGEEPYADLHYGAIIGGIVNNTLRPPVPESC 727
APELLNGSSSLVSEKVDVFSFGIVMWELLTGEEPYA+LHYGAII GIVNNTLRPPVPESC
Sbjct: 1169 APELLNGSSSLVSEKVDVFSFGIVMWELLTGEEPYAELHYGAII-GIVNNTLRPPVPESC 1227
Query: 726 DPDWKVLMEKCWSSEPSERPTFTEIASELRSIGSKISPKGQNQQ 595
DP W+ LME+CWSSEPSERP+FTE+ LR++ + S K Q Q+
Sbjct: 1228 DPRWRSLMEQCWSSEPSERPSFTEVGKRLRAMATP-STKAQPQK 1270
>ref|NP_173077.1| putative Ser/Thr protein kinase; protein id: At1g16270.1 [Arabidopsis
thaliana] gi|25518629|pir||F86297 hypothetical protein
F3O9.7 - Arabidopsis thaliana
gi|4966348|gb|AAD34679.1|AC006341_7 Contains PF|00069
Eukaryotic protein kinase domain. ESTs gb|H37741,
gb|T43005 and gb|AI100340 come from this gene.
[Arabidopsis thaliana]
Length = 1147
Score = 159 bits (401), Expect = 7e-38
Identities = 74/113 (65%), Positives = 90/113 (79%)
Frame = -2
Query: 906 APELLNGSSSLVSEKVDVFSFGIVMWELLTGEEPYADLHYGAIIGGIVNNTLRPPVPESC 727
APELLNGSSS VSEKVDVFSFGIV+WE+LTGEEPYA++HYGAIIGGIVNNTLRP +P C
Sbjct: 1038 APELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPSYC 1097
Query: 726 DPDWKVLMEKCWSSEPSERPTFTEIASELRSIGSKISPKGQNQQQQPASSQSQ 568
D DW++LME+CW+ P+ RP+FTEIA LR + + + NQ + PA S+
Sbjct: 1098 DSDWRILMEECWAPNPTARPSFTEIAGRLRVMSTAAT---SNQSKPPAHKASK 1147
>ref|NP_189116.1| protein kinase, putative; protein id: At3g24720.1 [Arabidopsis
thaliana]
Length = 297
Score = 158 bits (399), Expect = 1e-37
Identities = 70/107 (65%), Positives = 87/107 (80%)
Frame = -2
Query: 906 APELLNGSSSLVSEKVDVFSFGIVMWELLTGEEPYADLHYGAIIGGIVNNTLRPPVPESC 727
APELLNGSS+ VSEKVDVFS+GI +WE+LTGEEPYAD+H GAIIGGIV NTLRPP+P+SC
Sbjct: 191 APELLNGSSTRVSEKVDVFSYGISLWEILTGEEPYADMHCGAIIGGIVKNTLRPPIPKSC 250
Query: 726 DPDWKVLMEKCWSSEPSERPTFTEIASELRSIGSKISPKGQNQQQQP 586
P+WK LME+CWS +P RP FTEI LRS+ ++ K + ++ +P
Sbjct: 251 SPEWKKLMEQCWSVDPDSRPPFTEITCRLRSMSMEVVTKSKRRENKP 297
>ref|NP_171964.1| putative Ser/Thr protein kinase; protein id: At1g04700.1 [Arabidopsis
thaliana]
Length = 1042
Score = 157 bits (398), Expect = 2e-37
Identities = 73/99 (73%), Positives = 84/99 (84%)
Frame = -2
Query: 906 APELLNGSSSLVSEKVDVFSFGIVMWELLTGEEPYADLHYGAIIGGIVNNTLRPPVPESC 727
APELLNGSS+ VSEKVDVFSFGIVMWE+LTGEEPYA+LH GAIIGGIVNNTLRPPVPE C
Sbjct: 941 APELLNGSSNRVSEKVDVFSFGIVMWEILTGEEPYANLHCGAIIGGIVNNTLRPPVPERC 1000
Query: 726 DPDWKVLMEKCWSSEPSERPTFTEIASELRSIGSKISPK 610
+ +W+ LME+CWS +P RP+FTEI LRS+ + PK
Sbjct: 1001 EAEWRKLMEQCWSFDPGVRPSFTEIVERLRSMTVALQPK 1039
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 821,070,983
Number of Sequences: 1393205
Number of extensions: 19106301
Number of successful extensions: 67373
Number of sequences better than 10.0: 3660
Number of HSP's better than 10.0 without gapping: 61622
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 65492
length of database: 448,689,247
effective HSP length: 123
effective length of database: 277,325,032
effective search space used: 49363855696
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
