Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004907A_C01 KMC004907A_c01
(591 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAF79545.1|AC022464_3 F22G5.5 [Arabidopsis thaliana] 143 1e-33
ref|NP_172237.1| protein kinase APK1A; protein id: At1g07570.1 [... 143 1e-33
gb|AAO18450.1| putative protein kinase [Oryza sativa (japonica c... 141 7e-33
gb|AAK73157.1|AC079022_30 putative protein kinase [Oryza sativa] 137 8e-32
ref|NP_180459.1| putative protein kinase; protein id: At2g28930.... 136 2e-31
>gb|AAF79545.1|AC022464_3 F22G5.5 [Arabidopsis thaliana]
Length = 464
Score = 143 bits (361), Expect = 1e-33
Identities = 72/126 (57%), Positives = 92/126 (72%), Gaps = 3/126 (2%)
Frame = -1
Query: 591 KSDVFSFGVVLLEILSGKRAFDKNRPQGQHNLVEWARPYLANKRKLLRVLDTRLEGQYEL 412
KSDV+SFGVVLLE+LSG+RA DKNRP G+ NLVEWA+PYL NKRK+ RV+D RL+ QY +
Sbjct: 288 KSDVYSFGVVLLELLSGRRAVDKNRPSGERNLVEWAKPYLVNKRKIFRVIDNRLQDQYSM 347
Query: 411 EEAYKVAILSLRCLSTEAKLRPYMDEVVAYLEKLQAPHV---NKSNKNHLRRKSADDFIP 241
EEA KVA LSLRCL+TE KLRP M EVV++LE +Q+ + +K R + D +
Sbjct: 348 EEACKVATLSLRCLTTEIKLRPNMSEVVSHLEHIQSLNAAIGGNMDKTDRRMRRRSDSVV 407
Query: 240 VRTIKA 223
+ + A
Sbjct: 408 SKKVNA 413
>ref|NP_172237.1| protein kinase APK1A; protein id: At1g07570.1 [Arabidopsis
thaliana] gi|1168470|sp|Q06548|APKA_ARATH Protein kinase
APK1A gi|282877|pir||S28615
serine/threonine/tyrosine-specific protein kinase APK1
(EC 2.7.1.-) [validated] - Arabidopsis thaliana
gi|217829|dbj|BAA02092.1| protein
tyrosine-serine-threonine kinase [Arabidopsis thaliana]
gi|28393320|gb|AAO42086.1| putative protein kinase APK1A
[Arabidopsis thaliana] gi|28827602|gb|AAO50645.1|
putative protein kinase APK1A [Arabidopsis thaliana]
Length = 410
Score = 143 bits (361), Expect = 1e-33
Identities = 72/126 (57%), Positives = 92/126 (72%), Gaps = 3/126 (2%)
Frame = -1
Query: 591 KSDVFSFGVVLLEILSGKRAFDKNRPQGQHNLVEWARPYLANKRKLLRVLDTRLEGQYEL 412
KSDV+SFGVVLLE+LSG+RA DKNRP G+ NLVEWA+PYL NKRK+ RV+D RL+ QY +
Sbjct: 260 KSDVYSFGVVLLELLSGRRAVDKNRPSGERNLVEWAKPYLVNKRKIFRVIDNRLQDQYSM 319
Query: 411 EEAYKVAILSLRCLSTEAKLRPYMDEVVAYLEKLQAPHV---NKSNKNHLRRKSADDFIP 241
EEA KVA LSLRCL+TE KLRP M EVV++LE +Q+ + +K R + D +
Sbjct: 320 EEACKVATLSLRCLTTEIKLRPNMSEVVSHLEHIQSLNAAIGGNMDKTDRRMRRRSDSVV 379
Query: 240 VRTIKA 223
+ + A
Sbjct: 380 SKKVNA 385
>gb|AAO18450.1| putative protein kinase [Oryza sativa (japonica cultivar-group)]
Length = 416
Score = 141 bits (355), Expect = 7e-33
Identities = 72/112 (64%), Positives = 88/112 (78%), Gaps = 1/112 (0%)
Frame = -1
Query: 591 KSDVFSFGVVLLEILSGKRAFDKNRPQGQHNLVEWARPYLANKRKLLRVLDTRLEGQYEL 412
KSDV+SFGVVLLE++SG+RA DKNRPQG+HNLVEWARPYL +KRK+ RVLDTRLEGQY
Sbjct: 270 KSDVYSFGVVLLEMMSGRRAIDKNRPQGEHNLVEWARPYLTHKRKIFRVLDTRLEGQYSH 329
Query: 411 EEAYKVAILSLRCLSTEAKLRPYMDEVVAYLEKLQ-APHVNKSNKNHLRRKS 259
A VA L+L CLS EAK+RP M+ VV LE+LQ + HV++ R++S
Sbjct: 330 VGAQTVATLALECLSYEAKMRPSMEAVVTILEELQESSHVDRKPAAERRQES 381
>gb|AAK73157.1|AC079022_30 putative protein kinase [Oryza sativa]
Length = 395
Score = 137 bits (346), Expect = 8e-32
Identities = 69/112 (61%), Positives = 88/112 (77%)
Frame = -1
Query: 591 KSDVFSFGVVLLEILSGKRAFDKNRPQGQHNLVEWARPYLANKRKLLRVLDTRLEGQYEL 412
KSDV+SFGVVLLE+LSG+RA DKNRP G+HNLVEWARPYL +KR++ R+LD RL GQY L
Sbjct: 262 KSDVYSFGVVLLEMLSGRRALDKNRPTGEHNLVEWARPYLMSKRRIFRILDARLGGQYSL 321
Query: 411 EEAYKVAILSLRCLSTEAKLRPYMDEVVAYLEKLQAPHVNKSNKNHLRRKSA 256
+A K A L+L+C+S EAK RP M++VVA LE+LQ +N L++KS+
Sbjct: 322 AKAQKAATLALQCISVEAKNRPNMEQVVAVLEQLQDSKETGANP-QLQKKSS 372
>ref|NP_180459.1| putative protein kinase; protein id: At2g28930.1 [Arabidopsis
thaliana] gi|12644274|sp|P46573|APKB_ARATH Protein
kinase APK1B gi|7434286|pir||T02725 probable
serine/threonine/tyrosine-specific protein kinase (EC
2.7.1.-) T9I4.1 - Arabidopsis thaliana
gi|3461835|gb|AAC33221.1| putative protein kinase
[Arabidopsis thaliana] gi|20197437|gb|AAM15075.1|
putative protein kinase [Arabidopsis thaliana]
Length = 412
Score = 136 bits (342), Expect = 2e-31
Identities = 66/95 (69%), Positives = 80/95 (83%)
Frame = -1
Query: 591 KSDVFSFGVVLLEILSGKRAFDKNRPQGQHNLVEWARPYLANKRKLLRVLDTRLEGQYEL 412
KSDV+S+GVVLLE+LSG+RA DKNRP G+ LVEWARP LANKRKL RV+D RL+ QY +
Sbjct: 261 KSDVYSYGVVLLEVLSGRRAVDKNRPPGEQKLVEWARPLLANKRKLFRVIDNRLQDQYSM 320
Query: 411 EEAYKVAILSLRCLSTEAKLRPYMDEVVAYLEKLQ 307
EEA KVA L+LRCL+ E KLRP M+EVV++LE +Q
Sbjct: 321 EEACKVATLALRCLTFEIKLRPNMNEVVSHLEHIQ 355
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 466,265,170
Number of Sequences: 1393205
Number of extensions: 9352254
Number of successful extensions: 25159
Number of sequences better than 10.0: 1633
Number of HSP's better than 10.0 without gapping: 23971
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24684
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 22569056698
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
