Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004896A_C02 KMC004896A_c02
(697 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAF91324.1|AF244890_1 receptor-like protein kinase 3 [Glycine... 232 4e-60
gb|AAF91323.1|AF244889_1 receptor-like protein kinase 2 [Glycine... 231 7e-60
gb|AAF91322.1|AF244888_1 receptor-like protein kinase 1 [Glycine... 228 6e-59
ref|NP_201371.1| leucine-rich repeat transmembrane protein kinas... 193 2e-48
gb|AAO26313.1| receptor-like protein kinase [Elaeis guineensis] 189 4e-47
>gb|AAF91324.1|AF244890_1 receptor-like protein kinase 3 [Glycine max]
Length = 1012
Score = 232 bits (591), Expect = 4e-60
Identities = 122/144 (84%), Positives = 130/144 (89%), Gaps = 8/144 (5%)
Frame = -1
Query: 697 VDEKSDVYSFGLVLLELVTGRKPVGEFGDGVDIVQWVRKMTDSNQEGVLKVLDPRLPSVP 518
VDEKSDVYSFG+VLLEL+TGRKPVGEFGDGVDIVQWVRKMTDSN+EGVLKVLDPRLPSVP
Sbjct: 870 VDEKSDVYSFGVVLLELITGRKPVGEFGDGVDIVQWVRKMTDSNKEGVLKVLDPRLPSVP 929
Query: 517 LHEVMHVFYVAMLCVEEQAVERPTMREVVQILTELPQPPDSKHGGDSTITESSLSPSNSL 338
LHEVMHVFYVAMLCVEEQAVERPTMREVVQILTELP+PPDSK G+ TITESSLS SN+L
Sbjct: 930 LHEVMHVFYVAMLCVEEQAVERPTMREVVQILTELPKPPDSKE-GNLTITESSLSSSNAL 988
Query: 337 ESPTPASKEAK--------DLLSI 290
ESP+ ASKE + DLLSI
Sbjct: 989 ESPSSASKEDQNPPQSPPPDLLSI 1012
>gb|AAF91323.1|AF244889_1 receptor-like protein kinase 2 [Glycine max]
Length = 1012
Score = 231 bits (589), Expect = 7e-60
Identities = 122/144 (84%), Positives = 129/144 (88%), Gaps = 8/144 (5%)
Frame = -1
Query: 697 VDEKSDVYSFGLVLLELVTGRKPVGEFGDGVDIVQWVRKMTDSNQEGVLKVLDPRLPSVP 518
VDEKSDVYSFG+VLLEL+TGRKPVGEFGDGVDIVQWVRKMTDSN+EGVLKVLDPRLPSVP
Sbjct: 870 VDEKSDVYSFGVVLLELITGRKPVGEFGDGVDIVQWVRKMTDSNKEGVLKVLDPRLPSVP 929
Query: 517 LHEVMHVFYVAMLCVEEQAVERPTMREVVQILTELPQPPDSKHGGDSTITESSLSPSNSL 338
LHEVMHVFYVAMLCVEEQAVERPTMREVVQILTELP+PP SK GD TITESSLS SN+L
Sbjct: 930 LHEVMHVFYVAMLCVEEQAVERPTMREVVQILTELPKPPGSKE-GDLTITESSLSSSNAL 988
Query: 337 ESPTPASKEAK--------DLLSI 290
ESP+ ASKE + DLLSI
Sbjct: 989 ESPSSASKEDQNPPQSPPPDLLSI 1012
>gb|AAF91322.1|AF244888_1 receptor-like protein kinase 1 [Glycine max]
Length = 1008
Score = 228 bits (581), Expect = 6e-59
Identities = 118/132 (89%), Positives = 121/132 (91%)
Frame = -1
Query: 697 VDEKSDVYSFGLVLLELVTGRKPVGEFGDGVDIVQWVRKMTDSNQEGVLKVLDPRLPSVP 518
VDEKSDVYSFG+VLLELVTGRKPVGEFGDGVDIVQWVRKMTDSN+EGVLKVLD RLPSVP
Sbjct: 866 VDEKSDVYSFGVVLLELVTGRKPVGEFGDGVDIVQWVRKMTDSNKEGVLKVLDSRLPSVP 925
Query: 517 LHEVMHVFYVAMLCVEEQAVERPTMREVVQILTELPQPPDSKHGGDSTITESSLSPSNSL 338
LHEVMHVFYVAMLCVEEQAVERPTMREVVQILTELP+PP SKH ITESSLS SNSL
Sbjct: 926 LHEVMHVFYVAMLCVEEQAVERPTMREVVQILTELPKPPSSKH----AITESSLSSSNSL 981
Query: 337 ESPTPASKEAKD 302
SPT ASKE KD
Sbjct: 982 GSPTTASKEPKD 993
>ref|NP_201371.1| leucine-rich repeat transmembrane protein kinase, putative; protein
id: At5g65700.1, supported by cDNA: gi_20466695
[Arabidopsis thaliana] gi|7434429|pir||T05898
hypothetical protein F6H11.170 - Arabidopsis thaliana
gi|2827715|emb|CAA16688.1| receptor protein kinase - like
protein [Arabidopsis thaliana]
gi|10177328|dbj|BAB10677.1| receptor protein kinase-like
protein [Arabidopsis thaliana] gi|20466696|gb|AAM20665.1|
receptor protein kinase-like protein [Arabidopsis
thaliana]
Length = 1003
Score = 193 bits (491), Expect = 2e-48
Identities = 99/127 (77%), Positives = 111/127 (86%), Gaps = 4/127 (3%)
Frame = -1
Query: 697 VDEKSDVYSFGLVLLELVTGRKPVGEFGDGVDIVQWVRKMTDSNQEGVLKVLDPRLPSVP 518
VDEKSDVYSFG+VLLELVTGRKPVGEFGDGVDIVQWVRKMTDSN++ VLKVLDPRL S+P
Sbjct: 874 VDEKSDVYSFGVVLLELVTGRKPVGEFGDGVDIVQWVRKMTDSNKDSVLKVLDPRLSSIP 933
Query: 517 LHEVMHVFYVAMLCVEEQAVERPTMREVVQILTELPQPPDSKHGGDSTITESS----LSP 350
+HEV HVFYVAMLCVEEQAVERPTMREVVQILTE+P+ P SK D +TES+ LSP
Sbjct: 934 IHEVTHVFYVAMLCVEEQAVERPTMREVVQILTEIPKLPPSK---DQPMTESAPESELSP 990
Query: 349 SNSLESP 329
+ ++SP
Sbjct: 991 KSGVQSP 997
>gb|AAO26313.1| receptor-like protein kinase [Elaeis guineensis]
Length = 481
Score = 189 bits (479), Expect = 4e-47
Identities = 101/145 (69%), Positives = 112/145 (76%), Gaps = 9/145 (6%)
Frame = -1
Query: 697 VDEKSDVYSFGLVLLELVTGRKPVGEFGDGVDIVQWVRKMTDSNQEGVLKVLDPRLPSVP 518
VDEKSDVYSFG+VLLELVTGRKPVGEFGDGVDIVQWVRK+TD+N+EG+LK++DPRL SVP
Sbjct: 345 VDEKSDVYSFGVVLLELVTGRKPVGEFGDGVDIVQWVRKVTDTNKEGILKIIDPRLSSVP 404
Query: 517 LHEVMHVFYVAMLCVEEQAVERPTMREVVQILTELP---------QPPDSKHGGDSTITE 365
LHE MHVFYVAMLCVEEQ+VERPTMREVVQILTELP PP GG++ E
Sbjct: 405 LHEAMHVFYVAMLCVEEQSVERPTMREVVQILTELPGTPAKQGEDPPPPPPVGGETPPRE 464
Query: 364 SSLSPSNSLESPTPASKEAKDLLSI 290
S P +SP P DLLSI
Sbjct: 465 S--KPRQEQQSPPP------DLLSI 481
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 651,509,329
Number of Sequences: 1393205
Number of extensions: 15054019
Number of successful extensions: 55695
Number of sequences better than 10.0: 2189
Number of HSP's better than 10.0 without gapping: 50509
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 54211
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 31684559424
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
