Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004892A_C01 KMC004892A_c01
(588 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAO22763.1| putative receptor protein kinase [Arabidopsis tha... 232 3e-60
ref|NP_181242.1| putative receptor-like protein kinase; protein ... 232 3e-60
ref|NP_564904.1| F12A21.14; protein id: At1g67720.1 [Arabidopsis... 127 1e-28
gb|AAG28906.1|AC008113_22 F12A21.14 [Arabidopsis thaliana] 127 1e-28
dbj|BAC57630.1| putative receptor-like protein kinase [Oryza sat... 116 2e-25
>gb|AAO22763.1| putative receptor protein kinase [Arabidopsis thaliana]
Length = 933
Score = 232 bits (591), Expect = 3e-60
Identities = 115/161 (71%), Positives = 141/161 (87%), Gaps = 5/161 (3%)
Frame = -3
Query: 586 PEYYISQQLTDKSDIYSFGVILLELISGQEAISNDSFGANCRNIVQWAKLHIESGDIQGI 407
PEYYISQQLT+KSD+YSFGVILLEL+SGQEAISN+SFG NCRNIVQWAK+HI++GDI+GI
Sbjct: 774 PEYYISQQLTEKSDVYSFGVILLELMSGQEAISNESFGVNCRNIVQWAKMHIDNGDIRGI 833
Query: 406 IDPALG-NDYDLQSMWKIAEKALMCVQPHGHMRPSISEVLKEIQDAIAIEREA----EGN 242
IDPAL +DY LQSMWKIAEKAL+CV+PHG+MRPS+SEV K+IQDAI IE+EA G
Sbjct: 834 IDPALAEDDYSLQSMWKIAEKALLCVKPHGNMRPSMSEVQKDIQDAIRIEKEALAARGGI 893
Query: 241 SEELPVRNSGHASSMNMGSMDFSATENYISIDESIAQPTAR 119
S+E R+S H+SS+NMG +D + +++Y+SIDES+ QPTAR
Sbjct: 894 SDEFS-RSSAHSSSLNMGMLDLAGSQSYVSIDESVLQPTAR 933
>ref|NP_181242.1| putative receptor-like protein kinase; protein id: At2g37050.1
[Arabidopsis thaliana] gi|25387146|pir||H84787 probable
receptor-like protein kinase [imported] - Arabidopsis
thaliana gi|4371296|gb|AAD18154.1| putative receptor-like
protein kinase [Arabidopsis thaliana]
Length = 961
Score = 232 bits (591), Expect = 3e-60
Identities = 115/161 (71%), Positives = 141/161 (87%), Gaps = 5/161 (3%)
Frame = -3
Query: 586 PEYYISQQLTDKSDIYSFGVILLELISGQEAISNDSFGANCRNIVQWAKLHIESGDIQGI 407
PEYYISQQLT+KSD+YSFGVILLEL+SGQEAISN+SFG NCRNIVQWAK+HI++GDI+GI
Sbjct: 802 PEYYISQQLTEKSDVYSFGVILLELMSGQEAISNESFGVNCRNIVQWAKMHIDNGDIRGI 861
Query: 406 IDPALG-NDYDLQSMWKIAEKALMCVQPHGHMRPSISEVLKEIQDAIAIEREA----EGN 242
IDPAL +DY LQSMWKIAEKAL+CV+PHG+MRPS+SEV K+IQDAI IE+EA G
Sbjct: 862 IDPALAEDDYSLQSMWKIAEKALLCVKPHGNMRPSMSEVQKDIQDAIRIEKEALAARGGI 921
Query: 241 SEELPVRNSGHASSMNMGSMDFSATENYISIDESIAQPTAR 119
S+E R+S H+SS+NMG +D + +++Y+SIDES+ QPTAR
Sbjct: 922 SDEFS-RSSAHSSSLNMGMLDLAGSQSYVSIDESVLQPTAR 961
>ref|NP_564904.1| F12A21.14; protein id: At1g67720.1 [Arabidopsis thaliana]
Length = 929
Score = 127 bits (318), Expect = 1e-28
Identities = 63/131 (48%), Positives = 88/131 (67%)
Frame = -3
Query: 586 PEYYISQQLTDKSDIYSFGVILLELISGQEAISNDSFGANCRNIVQWAKLHIESGDIQGI 407
PEYY SQQLT+KSD+YSFGV+L EL+SG++ +S + FG NIV WA+ I GD+ GI
Sbjct: 776 PEYYASQQLTEKSDVYSFGVVLFELLSGKKPVSAEDFGPEL-NIVHWARSLIRKGDVCGI 834
Query: 406 IDPALGNDYDLQSMWKIAEKALMCVQPHGHMRPSISEVLKEIQDAIAIEREAEGNSEELP 227
IDP + ++ ++S+W++AE A CV+ GH RP + EV+ IQDAI IER GN L
Sbjct: 835 IDPCIASNVKIESVWRVAEVANQCVEQRGHNRPRMQEVIVAIQDAIRIER---GNENGLK 891
Query: 226 VRNSGHASSMN 194
+S + + +
Sbjct: 892 SSSSSSSKAQS 902
>gb|AAG28906.1|AC008113_22 F12A21.14 [Arabidopsis thaliana]
Length = 1184
Score = 127 bits (318), Expect = 1e-28
Identities = 63/131 (48%), Positives = 88/131 (67%)
Frame = -3
Query: 586 PEYYISQQLTDKSDIYSFGVILLELISGQEAISNDSFGANCRNIVQWAKLHIESGDIQGI 407
PEYY SQQLT+KSD+YSFGV+L EL+SG++ +S + FG NIV WA+ I GD+ GI
Sbjct: 747 PEYYASQQLTEKSDVYSFGVVLFELLSGKKPVSAEDFGPEL-NIVHWARSLIRKGDVCGI 805
Query: 406 IDPALGNDYDLQSMWKIAEKALMCVQPHGHMRPSISEVLKEIQDAIAIEREAEGNSEELP 227
IDP + ++ ++S+W++AE A CV+ GH RP + EV+ IQDAI IER GN L
Sbjct: 806 IDPCIASNVKIESVWRVAEVANQCVEQRGHNRPRMQEVIVAIQDAIRIER---GNENGLK 862
Query: 226 VRNSGHASSMN 194
+S + + +
Sbjct: 863 SSSSSSSKAQS 873
>dbj|BAC57630.1| putative receptor-like protein kinase [Oryza sativa (japonica
cultivar-group)]
Length = 980
Score = 116 bits (291), Expect = 2e-25
Identities = 58/110 (52%), Positives = 77/110 (69%), Gaps = 1/110 (0%)
Frame = -3
Query: 586 PEYYISQQLTDKSDIYSFGVILLELISGQEAISNDSFGANCRNIVQWAKLHIESGDIQGI 407
P YY+SQQLT KSD+YSFG+ILLELISG+ I ++ WAK H ESGDI+ I
Sbjct: 815 PHYYVSQQLTHKSDLYSFGIILLELISGRPPILLTPGAGAMASLGPWAKSHYESGDIEAI 874
Query: 406 IDPALGNDY-DLQSMWKIAEKALMCVQPHGHMRPSISEVLKEIQDAIAIE 260
+DP+L Y D+ S+WK+AE A+ C+ RPS+ EV+K+IQ+AIA+E
Sbjct: 875 VDPSLRGRYRDVHSVWKVAETAVRCIDADPRGRPSMPEVVKDIQEAIALE 924
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 494,036,520
Number of Sequences: 1393205
Number of extensions: 10588993
Number of successful extensions: 30856
Number of sequences better than 10.0: 1825
Number of HSP's better than 10.0 without gapping: 28514
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29634
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 22283372436
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
