>KMC004861A_C01 KMC004861A_c01
aatcaacaacaaaaatgcatttcacagcgttcctcatacaaatttaggcaagatacgAAA
AAGCATCAATACCTAAATTGAAAAAACATATAGTACACAGAGTATATGATCATTTAGATG
TACTTTAGACCAGTGATATATTGCTGCCTGGTAATCAGATACTGGGACAGGGAATATATA
ACTCCTAAGATACCCAAAATCCTAATCTTGAGAACATCTGTACATGCGATAGGAAGCAGA
TTAAGAGGCAAGGTTATCCATGGGGGTGAGTCACTCTGCTTTACATGGCTCCATACATAC
CTGTTGAAAAGTATATGACTGGGGAAAGTAAGAATGAGGAGGGCCAAATTCTTCACCAGA
AAAATCCAGTCCGGCCCACCGATTTGAAGACCCCATCCACCATTACCTTGCCAAACATCT
TCCCATATGCTGGAGAGGGCAGTTAAAACGAAGTAACCTGAGATGACAACAGTCACAGGA
AAATATCTGTGTCGGTCCCCGAAACCAGCAATAAAATCTGAATCCTGGTTAAGCAGCAAC
A

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC004861A_C01 KMC004861A_c01
         (541 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAM98076.1| AT5g13390/T22N19_40 [Arabidopsis thaliana]             189  1e-47
ref|NP_196843.1| putative protein; protein id: At5g13390.1 [Arab...   189  1e-47
gb|AAO83093.1| replication-associated protein RepA [Enterococcus...    33  1.7
gb|ZP_00023293.1| hypothetical protein [Ralstonia metallidurans]       33  2.9
gb|ZP_00006488.1| hypothetical protein [Rhodobacter sphaeroides]       32  4.9

>gb|AAM98076.1| AT5g13390/T22N19_40 [Arabidopsis thaliana]
          Length = 630

 Score =  189 bits (481), Expect = 1e-47
 Identities = 85/143 (59%), Positives = 115/143 (79%), Gaps = 2/143 (1%)
 Frame = -3

Query: 539 LLLNQDSDFIAGFGDRHRYFPVTVVISGYFVLTALSSIWEDVW-QGNGGWGLQIGGPDWI 363
           LLLNQDSD ++GFGD+ RYFPVTV IS Y  L++L ++WE+VW  GN GWG++IGG +W 
Sbjct: 488 LLLNQDSDLLSGFGDKQRYFPVTVAISTYLALSSLYTVWEEVWFGGNTGWGVEIGGREWF 547

Query: 362 FLVKNLALLILTFPSHILFNRYVWSH-VKQSDSPPWITLPLNLLPIACTDVLKIRILGIL 186
           F VKNLALLILT P HI+FNRYVWS+  K +D+ P +T+PL+   +  TDV ++R+LG+L
Sbjct: 548 FAVKNLALLILTAPGHIIFNRYVWSYTTKHTDASPMLTVPLSFAAVIITDVFQVRVLGVL 607

Query: 185 GVIYSLSQYLITRQQYITGLKYI 117
           G++YS +QY+I+RQQY+ GL+YI
Sbjct: 608 GIVYSAAQYVISRQQYMKGLRYI 630

>ref|NP_196843.1| putative protein; protein id: At5g13390.1 [Arabidopsis thaliana]
            gi|11281149|pir||T48586 hypothetical protein T22N19.40 -
            Arabidopsis thaliana gi|7543906|emb|CAB87146.1| putative
            protein [Arabidopsis thaliana]
          Length = 1123

 Score =  189 bits (481), Expect = 1e-47
 Identities = 85/143 (59%), Positives = 115/143 (79%), Gaps = 2/143 (1%)
 Frame = -3

Query: 539  LLLNQDSDFIAGFGDRHRYFPVTVVISGYFVLTALSSIWEDVW-QGNGGWGLQIGGPDWI 363
            LLLNQDSD ++GFGD+ RYFPVTV IS Y  L++L ++WE+VW  GN GWG++IGG +W 
Sbjct: 981  LLLNQDSDLLSGFGDKQRYFPVTVAISTYLALSSLYTVWEEVWFGGNTGWGVEIGGREWF 1040

Query: 362  FLVKNLALLILTFPSHILFNRYVWSH-VKQSDSPPWITLPLNLLPIACTDVLKIRILGIL 186
            F VKNLALLILT P HI+FNRYVWS+  K +D+ P +T+PL+   +  TDV ++R+LG+L
Sbjct: 1041 FAVKNLALLILTAPGHIIFNRYVWSYTTKHTDASPMLTVPLSFAAVIITDVFQVRVLGVL 1100

Query: 185  GVIYSLSQYLITRQQYITGLKYI 117
            G++YS +QY+I+RQQY+ GL+YI
Sbjct: 1101 GIVYSAAQYVISRQQYMKGLRYI 1123

>gb|AAO83093.1| replication-associated protein RepA [Enterococcus faecalis V583]
          Length = 336

 Score = 33.5 bits (75), Expect = 1.7
 Identities = 23/73 (31%), Positives = 32/73 (43%)
 Frame = +3

Query: 297 IPVEKYMTGESKNEEGQILHQKNPVRPTDLKTPSTITLPNIFPYAGEGS*NEVT*DDNSH 476
           IP +K  TGE KN   ++   K  V  TD+   S  +  N FP +G+          + H
Sbjct: 101 IPPKKLSTGEFKNYPNRLYLGKLEVSATDVYAISNASYTNEFPESGKNQ------PSDKH 154

Query: 477 RKISVSVPETSNK 515
            KI VS     N+
Sbjct: 155 DKIGVSFESGKNQ 167

>gb|ZP_00023293.1| hypothetical protein [Ralstonia metallidurans]
          Length = 438

 Score = 32.7 bits (73), Expect = 2.9
 Identities = 15/53 (28%), Positives = 26/53 (48%)
 Frame = -3

Query: 305 NRYVWSHVKQSDSPPWITLPLNLLPIACTDVLKIRILGILGVIYSLSQYLITR 147
           N  +W  ++ +  P W+ LP+     A      I +   LG++ +L+ YLI R
Sbjct: 126 NERLWIRIRAAGMPTWVALPMTADAQASGITAAIALSAALGLLAALTGYLIQR 178

>gb|ZP_00006488.1| hypothetical protein [Rhodobacter sphaeroides]
          Length = 315

 Score = 32.0 bits (71), Expect = 4.9
 Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 13/94 (13%)
 Frame = -3

Query: 395 WGLQIGG--PDWIFLVKNLALLILTFPSHILFN---RYVWSHVKQSDSPPWITLPLNLLP 231
           W   I G  P    L  + AL ++ F + I F    + +W  ++    P W  +PLNL+ 
Sbjct: 181 WSSLIPGVEPPTAHLETDAALALIVFLTTIGFGIRAQGLWGWLRAFARPTWAMIPLNLVE 240

Query: 230 IACTDV-LKIRILG-------ILGVIYSLSQYLI 153
                V L +R+ G       +LG++ SL+  L+
Sbjct: 241 QVTRSVSLMLRLFGNVMSGVFVLGIVLSLAGLLV 274

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 507,729,834
Number of Sequences: 1393205
Number of extensions: 12005466
Number of successful extensions: 29400
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 28494
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29384
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 18462123008
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

EST assemble image

clone accession position 1 MWL067d03_f AV769767 1 541 2 MRL012h01_f BP084343 58 514

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