Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004851A_C01 KMC004851A_c01
(536 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T51335 subtilisin-like proteinase AIR3, auxin-induced [impo... 82 5e-15
ref|NP_565309.2| subtilisin-like serine protease AIR3; protein i... 81 9e-15
gb|AAM15440.1| subtilisin-like serine protease AIR3 [Arabidopsis... 81 9e-15
gb|AAK74005.1| At2g04160/T16B23.1 [Arabidopsis thaliana] gi|1632... 81 9e-15
gb|AAM15483.1| subtilisin-like serine protease AIR3 [Arabidopsis... 81 9e-15
>pir||T51335 subtilisin-like proteinase AIR3, auxin-induced [imported] -
Arabidopsis thaliana (fragment)
gi|3695019|gb|AAC62611.1| subtilisin-like protease
[Arabidopsis thaliana]
Length = 758
Score = 81.6 bits (200), Expect = 5e-15
Identities = 53/136 (38%), Positives = 76/136 (54%), Gaps = 11/136 (8%)
Frame = +3
Query: 24 ATTKDYRGNPMQESDFKKLKDATPFAYGAGVIQPNLAVDPDLIYELDIKDHMDHFWHRGI 203
ATT D P+Q + K ATPF++GAG +QPNLAV+P L+Y+L IKD+++ G
Sbjct: 580 ATTMDDIPGPIQNATNMK---ATPFSFGAGHVQPNLAVNPGLVYDLGIKDYLNFLCSLG- 635
Query: 204 YDKDE-----------SKSTLNILNYKYNYPSISIPNLQFNHPQTATRVLTNVGSPGKYE 350
Y+ + S ++++N NYPSI++PNL + T +R + NVG P Y
Sbjct: 636 YNASQISVFSGNNFTCSSPKISLVN--LNYPSITVPNLT-SSKVTVSRTVKNVGRPSMYT 692
Query: 351 VTVEAPPQVRVEVDPT 398
V V P V V + PT
Sbjct: 693 VKVNNPHGVYVALKPT 708
>ref|NP_565309.2| subtilisin-like serine protease AIR3; protein id: At2g04160.1
[Arabidopsis thaliana] gi|4218991|gb|AAD12260.1|
subtilisin-like protease [Arabidopsis thaliana]
Length = 772
Score = 80.9 bits (198), Expect = 9e-15
Identities = 53/136 (38%), Positives = 75/136 (54%), Gaps = 11/136 (8%)
Frame = +3
Query: 24 ATTKDYRGNPMQESDFKKLKDATPFAYGAGVIQPNLAVDPDLIYELDIKDHMDHFWHRGI 203
AT D P+Q + K ATPF++GAG +QPNLAV+P L+Y+L IKD+++ G
Sbjct: 594 ATIMDDIPGPIQNATNMK---ATPFSFGAGHVQPNLAVNPGLVYDLGIKDYLNFLCSLG- 649
Query: 204 YDKDE-----------SKSTLNILNYKYNYPSISIPNLQFNHPQTATRVLTNVGSPGKYE 350
Y+ + S ++++N NYPSI++PNL + T +R + NVG P Y
Sbjct: 650 YNASQISVFSGNNFTCSSPKISLVN--LNYPSITVPNLT-SSKVTVSRTVKNVGRPSMYT 706
Query: 351 VTVEAPPQVRVEVDPT 398
V V P V V V PT
Sbjct: 707 VKVNNPQGVYVAVKPT 722
>gb|AAM15440.1| subtilisin-like serine protease AIR3 [Arabidopsis thaliana]
Length = 578
Score = 80.9 bits (198), Expect = 9e-15
Identities = 53/136 (38%), Positives = 75/136 (54%), Gaps = 11/136 (8%)
Frame = +3
Query: 24 ATTKDYRGNPMQESDFKKLKDATPFAYGAGVIQPNLAVDPDLIYELDIKDHMDHFWHRGI 203
AT D P+Q + K ATPF++GAG +QPNLAV+P L+Y+L IKD+++ G
Sbjct: 400 ATIMDDIPGPIQNATNMK---ATPFSFGAGHVQPNLAVNPGLVYDLGIKDYLNFLCSLG- 455
Query: 204 YDKDE-----------SKSTLNILNYKYNYPSISIPNLQFNHPQTATRVLTNVGSPGKYE 350
Y+ + S ++++N NYPSI++PNL + T +R + NVG P Y
Sbjct: 456 YNASQISVFSGNNFTCSSPKISLVN--LNYPSITVPNLT-SSKVTVSRTVKNVGRPSMYT 512
Query: 351 VTVEAPPQVRVEVDPT 398
V V P V V V PT
Sbjct: 513 VKVNNPQGVYVAVKPT 528
>gb|AAK74005.1| At2g04160/T16B23.1 [Arabidopsis thaliana]
gi|16323308|gb|AAL15409.1| At2g04160/T16B23.1
[Arabidopsis thaliana]
Length = 421
Score = 80.9 bits (198), Expect = 9e-15
Identities = 53/136 (38%), Positives = 75/136 (54%), Gaps = 11/136 (8%)
Frame = +3
Query: 24 ATTKDYRGNPMQESDFKKLKDATPFAYGAGVIQPNLAVDPDLIYELDIKDHMDHFWHRGI 203
AT D P+Q + K ATPF++GAG +QPNLAV+P L+Y+L IKD+++ G
Sbjct: 243 ATIMDDIPGPIQNATNMK---ATPFSFGAGHVQPNLAVNPGLVYDLGIKDYLNFLCSLG- 298
Query: 204 YDKDE-----------SKSTLNILNYKYNYPSISIPNLQFNHPQTATRVLTNVGSPGKYE 350
Y+ + S ++++N NYPSI++PNL + T +R + NVG P Y
Sbjct: 299 YNASQISVFSGNNFTCSSPKISLVN--LNYPSITVPNLT-SSKVTVSRTVKNVGRPSMYT 355
Query: 351 VTVEAPPQVRVEVDPT 398
V V P V V V PT
Sbjct: 356 VKVNNPQGVYVAVKPT 371
>gb|AAM15483.1| subtilisin-like serine protease AIR3 [Arabidopsis thaliana]
Length = 755
Score = 80.9 bits (198), Expect = 9e-15
Identities = 53/136 (38%), Positives = 75/136 (54%), Gaps = 11/136 (8%)
Frame = +3
Query: 24 ATTKDYRGNPMQESDFKKLKDATPFAYGAGVIQPNLAVDPDLIYELDIKDHMDHFWHRGI 203
AT D P+Q + K ATPF++GAG +QPNLAV+P L+Y+L IKD+++ G
Sbjct: 594 ATIMDDIPGPIQNATNMK---ATPFSFGAGHVQPNLAVNPGLVYDLGIKDYLNFLCSLG- 649
Query: 204 YDKDE-----------SKSTLNILNYKYNYPSISIPNLQFNHPQTATRVLTNVGSPGKYE 350
Y+ + S ++++N NYPSI++PNL + T +R + NVG P Y
Sbjct: 650 YNASQISVFSGNNFTCSSPKISLVN--LNYPSITVPNLT-SSKVTVSRTVKNVGRPSMYT 706
Query: 351 VTVEAPPQVRVEVDPT 398
V V P V V V PT
Sbjct: 707 VKVNNPQGVYVAVKPT 722
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 443,473,684
Number of Sequences: 1393205
Number of extensions: 8913202
Number of successful extensions: 21548
Number of sequences better than 10.0: 175
Number of HSP's better than 10.0 without gapping: 20973
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21440
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 18173652336
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
