>KMC004847A_C01 KMC004847A_c01
aggcaaaaatagacaaatcaggtaaatgtgaaaatgtttgaccgaagaaataaaaagtaa
aaggaaaaaaagaaacacagTTGTGTAGAATGCAGAACACAACTAAGCACTATATATTTC
AGATCACAACTCAATAGTGTTACAATTGAACCCGGTTAAACCAGCTAGACTCATTCACAT
AGATTACAAGTGTGTAAGATTGCAACCCTGCAAGCTTACCTCCCAAAATTTGAAGCCAAA
CCACATTCATTGATGTCCATCATTTCGATTAATCTAAAAGTAAACTAGCAAGGCAAAGTC
TAAGGGAAAAGAAAACCTCTCAGGTATACAAAGCCGTCTAACTTAAAGCAGGAAATCTTT
GTTGCCCTATTTCTCCCAGCATCAGCTAAATTGACAAACATTTCCCATCATGTTAAAATG
CAAAATTTCTGGTGCTTGCAAGCCCAACATACCGCAGCCAGTAGGCAGTGTCTATACCTG
TCTCATGGGAACATACAACTACCTCAACTTTGAGCTGAATCCTCATGGCTCTCGAGCTCC
GCTGACAGAAGAGTAGTATCAAAAGAAGAAAAAAAATATATCATTCCCTTCAAATGAGTT
CCAGGCATGGTATGTGGTATGTCATTCTACCGTCGTGGTCCTTTTCTCTAGCA

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC004847A_C01 KMC004847A_c01
         (653 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_694904.1| NADH dehydrogenase subunit 4 [Brugia malayi] gi...    26  8.3

>ref|NP_694904.1| NADH dehydrogenase subunit 4 [Brugia malayi]
           gi|23307677|gb|AAN17805.1| NADH dehydrogenase subunit 4
           [Brugia malayi]
          Length = 409

 Score = 26.2 bits (56), Expect(2) = 8.3
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -1

Query: 71  FFSFYFLFLRSNIFTFT*FVYF 6
           FF   FLF  S++F F  FVY+
Sbjct: 130 FFGMPFLFFFSHVFNFFNFVYY 151

 Score = 24.3 bits (51), Expect(2) = 8.3
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -1

Query: 113 IVLSCVLHSTQLCFFFSFYFLFL 45
           +  SC++    +CFFFS  FL L
Sbjct: 71  VFYSCLIVFFSVCFFFSGSFLIL 93

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 530,549,150
Number of Sequences: 1393205
Number of extensions: 10669238
Number of successful extensions: 23631
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 22898
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23593
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 28144814643
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

EST assemble image

clone accession position 1 MRL010d03_f BP084206 1 211 2 SPDL024g02_f BP053504 68 619 3 SPDL045e03_f BP054826 75 657 4 MRL019e02_f BP084691 87 537 5 SPDL052c08_f BP055276 92 658

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