Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004830A_C01 KMC004830A_c01
(573 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EAA34626.1| hypothetical protein [Neurospora crassa] 38 0.10
ref|NP_609930.4| CG31793-PA [Drosophila melanogaster] gi|2139202... 36 0.30
gb|AAK93282.1| LD35689p [Drosophila melanogaster] 36 0.30
gb|AAK49742.1| erythrocyte membrane protein-1 [Plasmodium falcip... 36 0.30
gb|EAA08139.1| agCP1359 [Anopheles gambiae str. PEST] 36 0.39
>gb|EAA34626.1| hypothetical protein [Neurospora crassa]
Length = 428
Score = 37.7 bits (86), Expect = 0.10
Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 5/100 (5%)
Frame = -1
Query: 561 DNALKDTEQSPPSAAEDKVAVSLP-----DKDLTACTETSQESKECVVEDGRNTIQDPEI 397
D + + P+A E K A S D D + ETS+E K V E+ + + D E
Sbjct: 67 DESSDEEMTDAPAAKETKKAESSDSDSDSDSDDSESEETSEEEKPAVKEEKKESSDDEES 126
Query: 396 VSGEARQNMPLAPSSSPVGSESVQSLSEKEPDQSSVSEEA 277
S + + S S SES + +++ ++SS EEA
Sbjct: 127 DSDNSDSDSDSDSSESEEKSESEEPSKKRKAEESSEEEEA 166
>ref|NP_609930.4| CG31793-PA [Drosophila melanogaster] gi|21392022|gb|AAM48365.1|
LD28489p [Drosophila melanogaster]
gi|22946797|gb|AAN11020.1| CG31793-PA [Drosophila
melanogaster]
Length = 1307
Score = 36.2 bits (82), Expect = 0.30
Identities = 29/102 (28%), Positives = 50/102 (48%), Gaps = 9/102 (8%)
Frame = -1
Query: 516 EDKVAVSLPDKD-LTAC------TETSQESKECVVEDGRNTIQDPEIVSGE--ARQNMPL 364
ED + + DK ++AC ++ Q+ + +VE +N+ EI++ +RQ+ L
Sbjct: 621 EDADLIVIMDKGHVSACGTYEEMLKSGQDFAQLLVESTQNSGGGDEIITSPNLSRQSSAL 680
Query: 363 APSSSPVGSESVQSLSEKEPDQSSVSEEAQEPETGN*NLSMY 238
+ SS S S++S+ EKE + S + G LSMY
Sbjct: 681 STKSSNGSSSSLESMVEKEKPKPSAVSSQESRSGGQIGLSMY 722
>gb|AAK93282.1| LD35689p [Drosophila melanogaster]
Length = 1074
Score = 36.2 bits (82), Expect = 0.30
Identities = 29/102 (28%), Positives = 50/102 (48%), Gaps = 9/102 (8%)
Frame = -1
Query: 516 EDKVAVSLPDKD-LTAC------TETSQESKECVVEDGRNTIQDPEIVSGE--ARQNMPL 364
ED + + DK ++AC ++ Q+ + +VE +N+ EI++ +RQ+ L
Sbjct: 388 EDADLIVIMDKGHVSACGTYEEMLKSGQDFAQLLVESTQNSGGGDEIITSPNLSRQSSAL 447
Query: 363 APSSSPVGSESVQSLSEKEPDQSSVSEEAQEPETGN*NLSMY 238
+ SS S S++S+ EKE + S + G LSMY
Sbjct: 448 STKSSNGSSSSLESMVEKEKPKPSAVSSQESRSGGQIGLSMY 489
>gb|AAK49742.1| erythrocyte membrane protein-1 [Plasmodium falciparum]
Length = 2658
Score = 36.2 bits (82), Expect = 0.30
Identities = 27/102 (26%), Positives = 45/102 (43%), Gaps = 16/102 (15%)
Frame = -1
Query: 513 DKVAVSLPDKDLTACTETSQ-----ESKECVVEDGRNTIQDPEIV-----------SGEA 382
+K A + + +CT+T+ E ++ ++E+ NT++ PEI GE
Sbjct: 2480 EKCAENDAQNGVQSCTQTTTDPPTLEDEDLLLEEEENTVKAPEICGEMKEETKDKEEGEC 2539
Query: 381 RQNMPLAPSSSPVGSESVQSLSEKEPDQSSVSEEAQEPETGN 256
+ P+ P SS G+E +E E + AQE E N
Sbjct: 2540 KAASPVVPESS--GTEGTNGENEDEKPKGEEGGTAQETEQTN 2579
>gb|EAA08139.1| agCP1359 [Anopheles gambiae str. PEST]
Length = 946
Score = 35.8 bits (81), Expect = 0.39
Identities = 27/110 (24%), Positives = 52/110 (46%), Gaps = 10/110 (9%)
Frame = -1
Query: 561 DNALKDTEQSPPSAAEDKVA--------VSLPDKDLTACTETSQESKECVVEDGRNTIQD 406
+ A++D + AA+++ A S ++D TA E S E + +D
Sbjct: 41 EKAIQDLKSESAEAADEENASIEHTIDVTSQEEEDNTAAEEVSTEETDTAADDATE---- 96
Query: 405 PEIVSGEARQNMPLAPSSSPVGSESVQSL--SEKEPDQSSVSEEAQEPET 262
EI E Q A ++ +++V++ +E+EP +++ SEE +E +T
Sbjct: 97 -EITPSEEVQEQLFADTTEDEATDNVEASEETEQEPAEAADSEEGEEEQT 145
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 461,774,981
Number of Sequences: 1393205
Number of extensions: 9407139
Number of successful extensions: 44075
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 42880
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43971
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 21243732558
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
