Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004824A_C01 KMC004824A_c01
(457 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T18400 glutamate-cysteine ligase (EC 6.3.2.2) - malaria par... 31 5.2
ref|NP_704728.1| gamma-glutamylcysteine synthetase [Plasmodium f... 31 5.2
emb|CAA07715.1| gamma-glutamylcysteine synthetase [Plasmodium fa... 31 5.2
emb|CAA07354.1| gamma-glutamylcysteine synthetase [Plasmodium fa... 31 5.2
>pir||T18400 glutamate-cysteine ligase (EC 6.3.2.2) - malaria parasite
(Plasmodium falciparum) gi|2832348|emb|CAA74990.1|
gamma-glutamylcysteine synthetase; glutamate--cysteine
ligase [Plasmodium falciparum]
Length = 1161
Score = 31.2 bits (69), Expect = 5.2
Identities = 16/42 (38%), Positives = 21/42 (49%)
Frame = +1
Query: 136 MPKVPNLTLN*LYQIAHFLTNHQLTVNKLTKKGDAEFCSIAK 261
+P PN+ LN +A +T H+ T K KG EF AK
Sbjct: 188 LPCFPNVLLNNSVLMARRITGHESTKKKFDSKGKVEFIENAK 229
>ref|NP_704728.1| gamma-glutamylcysteine synthetase [Plasmodium falciparum 3D7]
gi|23505089|emb|CAD51871.1| gamma-glutamylcysteine
synthetase [Plasmodium falciparum 3D7]
Length = 1063
Score = 31.2 bits (69), Expect = 5.2
Identities = 16/42 (38%), Positives = 21/42 (49%)
Frame = +1
Query: 136 MPKVPNLTLN*LYQIAHFLTNHQLTVNKLTKKGDAEFCSIAK 261
+P PN+ LN +A +T H+ T K KG EF AK
Sbjct: 146 LPCFPNVLLNNSVLMARRITGHESTKKKFDSKGKVEFIENAK 187
>emb|CAA07715.1| gamma-glutamylcysteine synthetase [Plasmodium falciparum]
Length = 1063
Score = 31.2 bits (69), Expect = 5.2
Identities = 16/42 (38%), Positives = 21/42 (49%)
Frame = +1
Query: 136 MPKVPNLTLN*LYQIAHFLTNHQLTVNKLTKKGDAEFCSIAK 261
+P PN+ LN +A +T H+ T K KG EF AK
Sbjct: 146 LPCFPNVLLNNSVLMARRITGHESTKKKFDSKGKVEFIENAK 187
>emb|CAA07354.1| gamma-glutamylcysteine synthetase [Plasmodium falciparum]
Length = 1118
Score = 31.2 bits (69), Expect = 5.2
Identities = 16/42 (38%), Positives = 21/42 (49%)
Frame = +1
Query: 136 MPKVPNLTLN*LYQIAHFLTNHQLTVNKLTKKGDAEFCSIAK 261
+P PN+ LN +A +T H+ T K KG EF AK
Sbjct: 146 LPCFPNVLLNNSVLMARRITGHESTKKKFDSKGKVEFIENAK 187
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 357,875,588
Number of Sequences: 1393205
Number of extensions: 6894825
Number of successful extensions: 10552
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10382
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10552
length of database: 448,689,247
effective HSP length: 112
effective length of database: 292,650,287
effective search space used: 11413361193
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
