Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004820A_C01 KMC004820A_c01
(520 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EAA36766.1| GLP_193_3029_2292 [Giardia lamblia ATCC 50803] 32 5.7
ref|NP_573317.1| CG6659-PA [Drosophila melanogaster] gi|7293494|... 32 5.7
ref|NP_728189.1| CG6659-PB [Drosophila melanogaster] gi|7293495|... 32 5.7
gb|ZP_00106869.1| hypothetical protein [Nostoc punctiforme] 31 7.5
ref|NP_701312.1| hypothetical protein [Plasmodium falciparum 3D7... 31 7.5
>gb|EAA36766.1| GLP_193_3029_2292 [Giardia lamblia ATCC 50803]
Length = 245
Score = 31.6 bits (70), Expect = 5.7
Identities = 18/57 (31%), Positives = 27/57 (46%)
Frame = -3
Query: 254 FDIV*CDGT*CALHVMVLGPRVHDLVSCDVPKGHCILPTCNIPRIRYEFIAYLVVIL 84
F I C G A + ++G RVH +P C L C +P Y F+A ++ +L
Sbjct: 124 FAIYFCVGYLVAFNTNIVGGRVH------IPGTFCFLGYCLMPLAAYTFVAMMMALL 174
>ref|NP_573317.1| CG6659-PA [Drosophila melanogaster] gi|7293494|gb|AAF48869.1|
CG6659-PA [Drosophila melanogaster]
gi|21483420|gb|AAM52685.1| LD33103p [Drosophila
melanogaster]
Length = 872
Score = 31.6 bits (70), Expect = 5.7
Identities = 17/71 (23%), Positives = 34/71 (46%)
Frame = +2
Query: 203 KPLHVEHIMFHHIILYQNWEYLCLVFAKNMEGEHQSCNLHMLFAIASLWS*LLSEQQYSA 382
+PL E+ F I L YLC+ + + + + + M+FA++ + L Q+S
Sbjct: 172 RPLARENFAFPFIFLQMF--YLCICIGRIIHRQRHTSRMFMIFAMSLFTACALLSWQFST 229
Query: 383 FLFRAYLFVAL 415
F+F + + +
Sbjct: 230 FIFTTQILIMM 240
>ref|NP_728189.1| CG6659-PB [Drosophila melanogaster] gi|7293495|gb|AAF48870.1|
CG6659-PB [Drosophila melanogaster]
Length = 757
Score = 31.6 bits (70), Expect = 5.7
Identities = 17/71 (23%), Positives = 34/71 (46%)
Frame = +2
Query: 203 KPLHVEHIMFHHIILYQNWEYLCLVFAKNMEGEHQSCNLHMLFAIASLWS*LLSEQQYSA 382
+PL E+ F I L YLC+ + + + + + M+FA++ + L Q+S
Sbjct: 57 RPLARENFAFPFIFLQMF--YLCICIGRIIHRQRHTSRMFMIFAMSLFTACALLSWQFST 114
Query: 383 FLFRAYLFVAL 415
F+F + + +
Sbjct: 115 FIFTTQILIMM 125
>gb|ZP_00106869.1| hypothetical protein [Nostoc punctiforme]
Length = 2012
Score = 31.2 bits (69), Expect = 7.5
Identities = 20/72 (27%), Positives = 30/72 (40%)
Frame = +3
Query: 87 NYNQVSYKFIPNSGYVTSRENTMTFGNITTDQIMNSRT*NHYM*STLCSITSYYIKIGNT 266
NY +S KF PN Y+TS T T + + H T + KI +
Sbjct: 1546 NYGMISAKFNPNGKYITSINQNYTVKLWTVEGEPRATLKGHNDTITKVDFSHDGTKIVTS 1605
Query: 267 YASYSLRIWRVN 302
A +++IW +N
Sbjct: 1606 SADNTIKIWDIN 1617
>ref|NP_701312.1| hypothetical protein [Plasmodium falciparum 3D7]
gi|23496379|gb|AAN36036.1|AE014842_58 hypothetical
protein [Plasmodium falciparum 3D7]
Length = 1464
Score = 31.2 bits (69), Expect = 7.5
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
Frame = +3
Query: 9 FFFNTHEKHITKQDKNHFTGWSLEL*NYNQVSYKFIPNSG-----YVTSRENTMTFGNIT 173
FFFNT++ K+ KN+ + N+N + + SG Y+ S+E + F N
Sbjct: 735 FFFNTNQIENEKKKKNNNNNIKTHIANFNIIHKNNLNESGKNMEHYIASQEENILFENKN 794
Query: 174 TD 179
D
Sbjct: 795 ND 796
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 426,823,783
Number of Sequences: 1393205
Number of extensions: 8584266
Number of successful extensions: 15052
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14785
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15051
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 16442828304
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
