Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004819A_C01 KMC004819A_c01
(423 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAD20994.1| putative potasium transporter [Oryza sativa (jap... 60 8e-09
dbj|BAB67929.1| putative high-affinity potassium transporter [Or... 60 8e-09
dbj|BAB32444.1| high-affinity potassium transporter [Phragmites ... 59 1e-08
ref|NP_567404.1| potassium transporter - like protein; protein i... 59 1e-08
pir||T06299 potassium transport protein homolog T9E8.160 - Arabi... 59 1e-08
>emb|CAD20994.1| putative potasium transporter [Oryza sativa (japonica
cultivar-group)]
Length = 733
Score = 59.7 bits (143), Expect = 8e-09
Identities = 26/38 (68%), Positives = 34/38 (89%)
Frame = -2
Query: 422 KIVVNYAYSFLRKNFRQGENLLAIPRNRLLKVGMTYEI 309
K+VVNY ++FLRKN R+GE +L+IPR +LLKVG+TYEI
Sbjct: 696 KVVVNYIFNFLRKNSRKGEKMLSIPRRKLLKVGITYEI 733
>dbj|BAB67929.1| putative high-affinity potassium transporter [Oryza sativa
(japonica cultivar-group)] gi|20161849|dbj|BAB90763.1|
putative high-affinity potassium transporter [Oryza
sativa (japonica cultivar-group)]
Length = 745
Score = 59.7 bits (143), Expect = 8e-09
Identities = 25/38 (65%), Positives = 32/38 (83%)
Frame = -2
Query: 422 KIVVNYAYSFLRKNFRQGENLLAIPRNRLLKVGMTYEI 309
KI+V+Y Y+F+RKNFRQ E + +P NRLL+VGMTYEI
Sbjct: 708 KIIVDYVYNFIRKNFRQPEKITCVPHNRLLRVGMTYEI 745
>dbj|BAB32444.1| high-affinity potassium transporter [Phragmites australis]
Length = 776
Score = 58.9 bits (141), Expect = 1e-08
Identities = 26/38 (68%), Positives = 33/38 (86%)
Frame = -2
Query: 422 KIVVNYAYSFLRKNFRQGENLLAIPRNRLLKVGMTYEI 309
KIVVNY Y+FLRKN +G N L+IP+++LLKVG+TYEI
Sbjct: 739 KIVVNYIYTFLRKNLNEGHNALSIPKDQLLKVGITYEI 776
>ref|NP_567404.1| potassium transporter - like protein; protein id: At4g13420.1,
supported by cDNA: gi_7108596 [Arabidopsis thaliana]
gi|7108597|gb|AAF36490.1|AF129478_1 K+ transporter HAK5
[Arabidopsis thaliana]
Length = 785
Score = 58.9 bits (141), Expect = 1e-08
Identities = 25/38 (65%), Positives = 34/38 (88%)
Frame = -2
Query: 422 KIVVNYAYSFLRKNFRQGENLLAIPRNRLLKVGMTYEI 309
K +VN+AY+FL+KN R+G+ LAIPR++LLKVGMTYE+
Sbjct: 748 KFIVNHAYNFLKKNCREGDKALAIPRSKLLKVGMTYEL 785
>pir||T06299 potassium transport protein homolog T9E8.160 - Arabidopsis thaliana
gi|4584547|emb|CAB40777.1| potassium transporter-like
protein [Arabidopsis thaliana]
gi|7268045|emb|CAB78384.1| potassium transporter-like
protein [Arabidopsis thaliana]
Length = 688
Score = 58.9 bits (141), Expect = 1e-08
Identities = 25/38 (65%), Positives = 34/38 (88%)
Frame = -2
Query: 422 KIVVNYAYSFLRKNFRQGENLLAIPRNRLLKVGMTYEI 309
K +VN+AY+FL+KN R+G+ LAIPR++LLKVGMTYE+
Sbjct: 651 KFIVNHAYNFLKKNCREGDKALAIPRSKLLKVGMTYEL 688
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 331,974,677
Number of Sequences: 1393205
Number of extensions: 6552097
Number of successful extensions: 14033
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 13856
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14032
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 6889859208
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
