Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004807A_C01 KMC004807A_c01
(766 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||S52728 H+-exporting ATPase (EC 3.6.3.6) - kidney bean gi|75... 218 1e-55
emb|CAB69823.1| plasma membrane H+ ATPase [Prunus persica] 216 4e-55
emb|CAC29436.1| P-type H+-ATPase [Vicia faba] 209 3e-53
gb|AAB17186.1| plasma membrane H+-ATPase [Lycopersicon esculentum] 209 3e-53
pir||S50752 H+-exporting ATPase (EC 3.6.3.6) (clone PHA2) - pota... 209 3e-53
>pir||S52728 H+-exporting ATPase (EC 3.6.3.6) - kidney bean
gi|758250|emb|CAA59799.1| H(+)-transporting ATPase
[Phaseolus vulgaris]
Length = 951
Score = 218 bits (554), Expect = 1e-55
Identities = 107/112 (95%), Positives = 110/112 (97%)
Frame = -2
Query: 762 QIAIRYALSGKAWDNLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPETSNVFNEK 583
+ AIRY LSGKAWDNLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPETSN+FN+K
Sbjct: 840 KFAIRYILSGKAWDNLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPETSNLFNDK 899
Query: 582 NSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 427
NSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV
Sbjct: 900 NSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 951
>emb|CAB69823.1| plasma membrane H+ ATPase [Prunus persica]
Length = 954
Score = 216 bits (549), Expect = 4e-55
Identities = 106/112 (94%), Positives = 110/112 (97%)
Frame = -2
Query: 762 QIAIRYALSGKAWDNLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPETSNVFNEK 583
+ AIRY LSGKAWDNLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPET+N+F+EK
Sbjct: 843 KFAIRYILSGKAWDNLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPETNNLFSEK 902
Query: 582 NSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 427
NSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV
Sbjct: 903 NSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 954
>emb|CAC29436.1| P-type H+-ATPase [Vicia faba]
Length = 951
Score = 209 bits (533), Expect = 3e-53
Identities = 102/112 (91%), Positives = 107/112 (95%)
Frame = -2
Query: 762 QIAIRYALSGKAWDNLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPETSNVFNEK 583
+ IRY LSGKAWDNLLENKTAFTTKKDYGKEEREAQWA AQRTLHGLQ PET+N+FN+K
Sbjct: 840 KFVIRYVLSGKAWDNLLENKTAFTTKKDYGKEEREAQWATAQRTLHGLQSPETTNLFNDK 899
Query: 582 NSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 427
NSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDT+QQHYTV
Sbjct: 900 NSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTMQQHYTV 951
>gb|AAB17186.1| plasma membrane H+-ATPase [Lycopersicon esculentum]
Length = 952
Score = 209 bits (532), Expect = 3e-53
Identities = 102/112 (91%), Positives = 108/112 (96%)
Frame = -2
Query: 762 QIAIRYALSGKAWDNLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPETSNVFNEK 583
+ AIRY LSGKAW+NLL+NKTAFTTKKDYGKEEREAQWA AQRTLHGLQPPE SN+FNEK
Sbjct: 841 KFAIRYILSGKAWNNLLDNKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPEASNLFNEK 900
Query: 582 NSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 427
NSYRELSEIAEQAKRRAE+ARLRELHTLKGHVESVVKLKGLDI+TIQQHYTV
Sbjct: 901 NSYRELSEIAEQAKRRAEMARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 952
>pir||S50752 H+-exporting ATPase (EC 3.6.3.6) (clone PHA2) - potato
gi|435001|emb|CAA54045.1| H(+)-transporting ATPase
[Solanum tuberosum]
Length = 952
Score = 209 bits (532), Expect = 3e-53
Identities = 102/112 (91%), Positives = 108/112 (96%)
Frame = -2
Query: 762 QIAIRYALSGKAWDNLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPETSNVFNEK 583
+ AIRY LSGKAW+NLL+NKTAFTTKKDYGKEEREAQWA AQRTLHGLQPPE SN+FNEK
Sbjct: 841 KFAIRYILSGKAWNNLLDNKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPEASNLFNEK 900
Query: 582 NSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 427
NSYRELSEIAEQAKRRAE+ARLRELHTLKGHVESVVKLKGLDI+TIQQHYTV
Sbjct: 901 NSYRELSEIAEQAKRRAEMARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 952
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 603,191,735
Number of Sequences: 1393205
Number of extensions: 12096425
Number of successful extensions: 32350
Number of sequences better than 10.0: 87
Number of HSP's better than 10.0 without gapping: 31215
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32290
length of database: 448,689,247
effective HSP length: 121
effective length of database: 280,111,442
effective search space used: 37254821786
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
