Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004784A_C01 KMC004784A_c01
(560 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAF89579.1|AF165891_1 phosphatidic acid phosphatase alpha [Vi... 185 4e-46
gb|AAF32467.1| putative phosphatidate phosphohydrolase [Arabidop... 144 6e-34
ref|NP_566177.1| putative phosphatidate phosphohydrolase; protei... 144 6e-34
ref|NP_172961.1| putative phosphatidic acid phosphatase; protein... 129 3e-29
gb|AAF89745.3|AF171230_1 phosphatidic acid phosphatase beta [Vig... 118 6e-26
>gb|AAF89579.1|AF165891_1 phosphatidic acid phosphatase alpha [Vigna unguiculata]
Length = 374
Score = 185 bits (469), Expect = 4e-46
Identities = 90/121 (74%), Positives = 102/121 (83%), Gaps = 2/121 (1%)
Frame = -2
Query: 559 VVLPLLFASLVGISRVDDYWHHWQDVFAGGLLGLVMATFCYLQFFPPPYHPEGWGPYAYF 380
V LPLLFASLVGISRVDDYWHHWQDVFAGGLLGL ++TFCYLQFFPPPYH EGWGPYAYF
Sbjct: 255 VFLPLLFASLVGISRVDDYWHHWQDVFAGGLLGLTVSTFCYLQFFPPPYHSEGWGPYAYF 314
Query: 379 RMLEESRGMTQQAANGESSSEAQLRE--AQDQEGQGFHGCMGITLARDQGGETLDEIEAG 206
RMLEESR MT Q N +S AQL E A+ +EGQG HGCMG++L+RD+ TL++IE+G
Sbjct: 315 RMLEESRQMT-QVPNVPNSGHAQLTEVQAEGEEGQGCHGCMGLSLSRDRNA-TLNDIESG 372
Query: 205 R 203
R
Sbjct: 373 R 373
>gb|AAF32467.1| putative phosphatidate phosphohydrolase [Arabidopsis thaliana]
Length = 314
Score = 144 bits (364), Expect = 6e-34
Identities = 70/120 (58%), Positives = 87/120 (72%), Gaps = 1/120 (0%)
Frame = -2
Query: 559 VVLPLLFASLVGISRVDDYWHHWQDVFAGGLLGLVMATFCYLQFFPPPYHPEGWGPYAYF 380
V+LPLLFA+LVGISRVDDYWHHWQDVFAGGLLGL ++T CYLQFFPPPYH EGWGPYAYF
Sbjct: 200 VILPLLFAALVGISRVDDYWHHWQDVFAGGLLGLAISTICYLQFFPPPYHTEGWGPYAYF 259
Query: 379 RMLEESRGMTQQAANGE-SSSEAQLREAQDQEGQGFHGCMGITLARDQGGETLDEIEAGR 203
++LE +R Q AANG Q+ ++++G G MG+ L + +++E GR
Sbjct: 260 QVLEAAR--VQGAANGAVQQPPPQVNNGEEEDG----GFMGLHLVDNPTMRREEDVETGR 313
>ref|NP_566177.1| putative phosphatidate phosphohydrolase; protein id: At3g02600.1,
supported by cDNA: 121374. [Arabidopsis thaliana]
gi|21537136|gb|AAM61477.1| putative phosphatidate
phosphohydrolase [Arabidopsis thaliana]
Length = 364
Score = 144 bits (364), Expect = 6e-34
Identities = 70/120 (58%), Positives = 87/120 (72%), Gaps = 1/120 (0%)
Frame = -2
Query: 559 VVLPLLFASLVGISRVDDYWHHWQDVFAGGLLGLVMATFCYLQFFPPPYHPEGWGPYAYF 380
V+LPLLFA+LVGISRVDDYWHHWQDVFAGGLLGL ++T CYLQFFPPPYH EGWGPYAYF
Sbjct: 250 VILPLLFAALVGISRVDDYWHHWQDVFAGGLLGLAISTICYLQFFPPPYHTEGWGPYAYF 309
Query: 379 RMLEESRGMTQQAANGE-SSSEAQLREAQDQEGQGFHGCMGITLARDQGGETLDEIEAGR 203
++LE +R Q AANG Q+ ++++G G MG+ L + +++E GR
Sbjct: 310 QVLEAAR--VQGAANGAVQQPPPQVNNGEEEDG----GFMGLHLVDNPTMRREEDVETGR 363
>ref|NP_172961.1| putative phosphatidic acid phosphatase; protein id: At1g15080.1,
supported by cDNA: 37546., supported by cDNA:
gi_14020948 [Arabidopsis thaliana]
gi|25353095|pir||E86284 F9L1.2 protein - Arabidopsis
thaliana gi|5103807|gb|AAD39637.1|AC007591_2 Contains
similarity to gb|AF014403 type-2 phosphatidic acid
phosphatase alpha-2 (PAP2_a2) from Homo sapiens. ESTs
gb|T88254 and gb|AA394650 come from this gene.
[Arabidopsis thaliana] gi|14020949|dbj|BAB47574.1|
phosphatidic acid phosphatase [Arabidopsis thaliana]
gi|21593261|gb|AAM65210.1| putative phosphatidic acid
phosphatase [Arabidopsis thaliana]
gi|26005745|dbj|BAC41335.1| prenyl diphosphate
phosphatase [Arabidopsis thaliana]
gi|28393050|gb|AAO41959.1| putative phosphatidic acid
phosphatase [Arabidopsis thaliana]
gi|28827316|gb|AAO50502.1| putative phosphatidic acid
phosphatase [Arabidopsis thaliana]
Length = 290
Score = 129 bits (323), Expect = 3e-29
Identities = 53/74 (71%), Positives = 64/74 (85%)
Frame = -2
Query: 559 VVLPLLFASLVGISRVDDYWHHWQDVFAGGLLGLVMATFCYLQFFPPPYHPEGWGPYAYF 380
V+LPLL A+LVG+SRVDDYWHHWQDVF G ++GL +ATFCYLQFFPPPY P+GWGP+AYF
Sbjct: 201 VILPLLVAALVGVSRVDDYWHHWQDVFGGAIIGLTVATFCYLQFFPPPYDPDGWGPHAYF 260
Query: 379 RMLEESRGMTQQAA 338
+ML +SR Q +A
Sbjct: 261 QMLADSRNDVQDSA 274
>gb|AAF89745.3|AF171230_1 phosphatidic acid phosphatase beta [Vigna unguiculata]
Length = 322
Score = 118 bits (295), Expect = 6e-26
Identities = 51/88 (57%), Positives = 64/88 (71%)
Frame = -2
Query: 559 VVLPLLFASLVGISRVDDYWHHWQDVFAGGLLGLVMATFCYLQFFPPPYHPEGWGPYAYF 380
V LP+L A+++ SRVDDYWHHWQDVFAGGL+G +A+FCYLQF+PPPY +GWGP+AYF
Sbjct: 201 VFLPILVAAMIAGSRVDDYWHHWQDVFAGGLIGTTIASFCYLQFYPPPYDLDGWGPHAYF 260
Query: 379 RMLEESRGMTQQAANGESSSEAQLREAQ 296
+ML ESR +Q + Q E Q
Sbjct: 261 QMLAESRNGSQPSTVNNEIHHVQSSELQ 288
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 463,719,006
Number of Sequences: 1393205
Number of extensions: 9742004
Number of successful extensions: 25297
Number of sequences better than 10.0: 111
Number of HSP's better than 10.0 without gapping: 24624
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25284
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 20095422690
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
