>KMC004778A_C01 KMC004778A_c01
gaatTGAACCAGTATGTATATATTTGATTTTACTGAAAGTATACACACAAATAACTTGAC
AGGAGGACCCATGTTACACGTCTCTTCACTGTGGTTGGAATTGAAGGAGGTAAACTTCAA
GAAACAAAAACAAAATGCTGAAAACATAAGACATCTAGGGAGCTTTTATCCTAGAATTAT
GTTTCTAGGCACTTTCTACCTAGTAACAAACAAAGCATATAAAACAGGTTTCTAAATTCC
AATAGTTATAGTTAAACCAACATTGCATTCTTCCTAGCAGCTGCATCTTTTCTCACTGAT
ATGACCCATTTGATCGCAGCTCGAATCTTGCACCACTCTACTTTGGGTTTCCTACTTCTT
GATATATCCATAGCATGATTCAGCAAAGTGTTACGGCTGCTAAATTCTGCTCCATCACAA
GAACCAAAGTAAAAGCCATTTTCTGAACTCTCATACTGTGTTGGATAACAACATTGCATA
AGTGGAAAATGTGATCCATTGAAGTAGCAGTTATCCCCTTCTATGTAC

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC004778A_C01 KMC004778A_c01
         (528 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

emb|CAB71126.1| calmodulin-binding protein [Cicer arietinum]           39  0.029
gb|AAL11615.1|AF424622_1 At2g18750/MSF3.13 [Arabidopsis thaliana...    34  0.93
pir||B84568 probable calmodulin-binding protein [imported] - Ara...    34  0.93
pir||T03793 calmodulin-binding protein TCB60 - common tobacco gi...    34  0.93
gb|AAN65368.1| calmodulin-binding protein 60-B [Phaseolus vulgaris]    34  0.93

>emb|CAB71126.1| calmodulin-binding protein [Cicer arietinum]
          Length = 282

 Score = 39.3 bits (90), Expect = 0.029
 Identities = 24/55 (43%), Positives = 33/55 (59%), Gaps = 6/55 (10%)
 Frame = -2

Query: 416 DGAEFSSRN---TLLNHAMDISRSR---KPKVEWCKIRAAIKWVISVRKDAAARK 270
           DG  +SS     T +N+ MD  R+R   K  V W K++AA++W I VRK AA R+
Sbjct: 219 DGYPYSSPYMPATSINYNMDDERNRSSGKAVVGWLKLKAALRWGIFVRKKAAERR 273

>gb|AAL11615.1|AF424622_1 At2g18750/MSF3.13 [Arabidopsis thaliana] gi|23505859|gb|AAN28789.1|
           At2g18750/MSF3.13 [Arabidopsis thaliana]
          Length = 315

 Score = 34.3 bits (77), Expect = 0.93
 Identities = 15/42 (35%), Positives = 26/42 (61%)
 Frame = -2

Query: 395 RNTLLNHAMDISRSRKPKVEWCKIRAAIKWVISVRKDAAARK 270
           + ++ ++  D S S K  V W KI+AA++W   +R+ AA R+
Sbjct: 263 QTSMADYEEDRSNSGKAVVGWLKIKAAMRWGFFIRRKAAQRR 304

>pir||B84568 probable calmodulin-binding protein [imported] - Arabidopsis
           thaliana
          Length = 652

 Score = 34.3 bits (77), Expect = 0.93
 Identities = 15/42 (35%), Positives = 26/42 (61%)
 Frame = -2

Query: 395 RNTLLNHAMDISRSRKPKVEWCKIRAAIKWVISVRKDAAARK 270
           + ++ ++  D S S K  V W KI+AA++W   +R+ AA R+
Sbjct: 600 QTSMADYEEDRSNSGKAVVGWLKIKAAMRWGFFIRRKAAQRR 641

>pir||T03793 calmodulin-binding protein TCB60 - common tobacco
           gi|1698548|gb|AAB37246.1| calmodulin-binding protein
          Length = 551

 Score = 34.3 bits (77), Expect = 0.93
 Identities = 22/59 (37%), Positives = 30/59 (50%)
 Frame = -2

Query: 446 SENGFYFGSCDGAEFSSRNTLLNHAMDISRSRKPKVEWCKIRAAIKWVISVRKDAAARK 270
           SE+G+ F S       S +    +  D   S K  V W KI+AA++W   VRK AA R+
Sbjct: 488 SEDGYGFPSF----MPSPSPTFGYDEDPKPSGKAVVGWLKIKAAMRWGFFVRKKAAERR 542

>gb|AAN65368.1| calmodulin-binding protein 60-B [Phaseolus vulgaris]
          Length = 55

 Score = 34.3 bits (77), Expect = 0.93
 Identities = 20/48 (41%), Positives = 29/48 (59%), Gaps = 3/48 (6%)
 Frame = -2

Query: 389 TLLNHAMDISRSR---KPKVEWCKIRAAIKWVISVRKDAAARKNAMLV 255
           T + + +D  R+R   K  V W K++AA++W I +RK  AA K A LV
Sbjct: 4   TSMGYHLDDERNRSSGKAVVGWLKLKAALRWGIFIRK-RAAEKRAQLV 50

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 432,400,273
Number of Sequences: 1393205
Number of extensions: 8474960
Number of successful extensions: 15958
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 15602
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15956
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 17308240320
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

EST assemble image

clone accession position 1 MR099a03_f BP083548 1 88 2 MRL033e07_f BP085350 2 360 3 MRL025d04_f BP084995 18 528

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