Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004773A_C01 KMC004773A_c01
(456 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAC19986.1| 5-alpha-taxadienol-10-beta-hydroxylase-like prot... 81 6e-15
dbj|BAC19981.1| 5-alpha-taxadienol-10-beta-hydroxylase-like prot... 80 1e-14
dbj|BAC56035.1| putative Cytochrome P450 85 (Dwarf protein) [Ory... 79 2e-14
dbj|BAC19978.1| 5-alpha-taxadienol-10-beta-hydroxylase-like prot... 79 2e-14
dbj|BAC56032.1| putative Cytochrome P450 [Oryza sativa (japonica... 76 2e-13
>dbj|BAC19986.1| 5-alpha-taxadienol-10-beta-hydroxylase-like protein [Oryza sativa
(japonica cultivar-group)]
Length = 495
Score = 80.9 bits (198), Expect = 6e-15
Identities = 35/59 (59%), Positives = 44/59 (74%), Gaps = 3/59 (5%)
Frame = -1
Query: 447 PPYNFIPFGGGARICPGYELSRIETLVTIHYLVTRFSWKL---SSDNFFKRDPMPVPTH 280
PPY+F+ FGGG RICPG EL+R+ETLVT+HYLV F W+L +N F RDP+P P +
Sbjct: 418 PPYSFVAFGGGPRICPGMELARVETLVTMHYLVRHFRWRLCCGGEENTFVRDPLPSPAN 476
>dbj|BAC19981.1| 5-alpha-taxadienol-10-beta-hydroxylase-like protein [Oryza sativa
(japonica cultivar-group)]
Length = 475
Score = 80.1 bits (196), Expect = 1e-14
Identities = 34/57 (59%), Positives = 45/57 (78%), Gaps = 1/57 (1%)
Frame = -1
Query: 453 SIPPYNFIPFGGGARICPGYELSRIETLVTIHYLVTRFSWKL-SSDNFFKRDPMPVP 286
SIPPY F+PFGGG R+CPG E +R ETLVT+HYLV +F WKL + +++DP+P+P
Sbjct: 405 SIPPYCFVPFGGGPRMCPGNEFARTETLVTMHYLVRQFRWKLCCKEEGYRKDPLPMP 461
>dbj|BAC56035.1| putative Cytochrome P450 85 (Dwarf protein) [Oryza sativa (japonica
cultivar-group)]
Length = 483
Score = 79.3 bits (194), Expect = 2e-14
Identities = 35/58 (60%), Positives = 44/58 (75%), Gaps = 1/58 (1%)
Frame = -1
Query: 456 ASIPPYNFIPFGGGARICPGYELSRIETLVTIHYLVTRFSWKL-SSDNFFKRDPMPVP 286
+SIPPY F+PFGGG R+CPG E +R ETLVT+H LVT+F WKL + +K+DP P P
Sbjct: 407 SSIPPYCFVPFGGGPRMCPGNEFARTETLVTMHSLVTQFRWKLCCKEESYKKDPSPTP 464
>dbj|BAC19978.1| 5-alpha-taxadienol-10-beta-hydroxylase-like protein [Oryza sativa
(japonica cultivar-group)] gi|28071350|dbj|BAC56038.1|
OSJNBa0036M16.37 [Oryza sativa (japonica
cultivar-group)]
Length = 475
Score = 79.3 bits (194), Expect = 2e-14
Identities = 33/58 (56%), Positives = 45/58 (76%), Gaps = 1/58 (1%)
Frame = -1
Query: 456 ASIPPYNFIPFGGGARICPGYELSRIETLVTIHYLVTRFSWKL-SSDNFFKRDPMPVP 286
+S+PPY F+PFGGG R+CPG E +R ETLV +HYLV +F WKL D +++DP+P+P
Sbjct: 400 SSVPPYCFVPFGGGPRMCPGNEFARTETLVAMHYLVRQFRWKLCCKDEGYRKDPVPMP 457
>dbj|BAC56032.1| putative Cytochrome P450 [Oryza sativa (japonica cultivar-group)]
Length = 489
Score = 75.9 bits (185), Expect = 2e-13
Identities = 33/57 (57%), Positives = 42/57 (72%), Gaps = 1/57 (1%)
Frame = -1
Query: 447 PPYNFIPFGGGARICPGYELSRIETLVTIHYLVTRFSWKL-SSDNFFKRDPMPVPTH 280
PP +++ FGGG RICPG E +RIETLV +H+LV +F WKL ++ F RDPMP P H
Sbjct: 421 PPCSYVAFGGGPRICPGIEFARIETLVMMHHLVRKFRWKLCCKEDTFARDPMPTPLH 477
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 418,064,142
Number of Sequences: 1393205
Number of extensions: 9151181
Number of successful extensions: 25193
Number of sequences better than 10.0: 968
Number of HSP's better than 10.0 without gapping: 24667
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25191
length of database: 448,689,247
effective HSP length: 112
effective length of database: 292,650,287
effective search space used: 11413361193
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
