Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004762A_C01 KMC004762A_c01
(474 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAL73562.1|AC079632_6 Putative receptor-like protein kinase [... 78 4e-14
ref|NP_174690.1| hypothetical protein; protein id: At1g34300.1, ... 60 9e-09
gb|AAA32858.1| receptor-like protein kinase 58 6e-08
pir||T01537 S-receptor kinase (EC 2.7.1.-) homolog 1 precursor -... 58 6e-08
gb|AAM08424.1|AC112513_10 Putative S-receptor kinase [Oryza sativa] 53 1e-06
>gb|AAL73562.1|AC079632_6 Putative receptor-like protein kinase [Oryza sativa]
gi|19920204|gb|AAM08636.1|AC108883_9 Putative
receptor-like protein kinase [Oryza sativa]
Length = 813
Score = 78.2 bits (191), Expect = 4e-14
Identities = 35/49 (71%), Positives = 42/49 (85%)
Frame = -1
Query: 426 VNRMVMTAMWCLQERPEMRPTMGKVAKMLEGTAEITEPKKPTVFFLGEE 280
V RMV TAMWCLQ+R +MRP+MGKVAKMLEGT EITEP KPT+F + ++
Sbjct: 765 VERMVKTAMWCLQDRADMRPSMGKVAKMLEGTVEITEPVKPTIFCVQDD 813
>ref|NP_174690.1| hypothetical protein; protein id: At1g34300.1, supported by cDNA:
gi_19699083 [Arabidopsis thaliana]
gi|25518170|pir||B86467 hypothetical protein F23M19.5 -
Arabidopsis thaliana gi|5091617|gb|AAD39605.1|AC007454_4
Contains similarity to gi|479356 protein kinase PK1 from
Zea mays, is a member of the PF|00954 S-locus
glycoprotein family and contains a PF|00069 Eukaryotic
protein kinase domain. [Arabidopsis thaliana]
gi|19699084|gb|AAL90909.1| At1g34300/F23M19_5
[Arabidopsis thaliana] gi|24111429|gb|AAN46865.1|
At1g34300/F23M19_5 [Arabidopsis thaliana]
Length = 829
Score = 60.5 bits (145), Expect = 9e-09
Identities = 30/57 (52%), Positives = 37/57 (64%)
Frame = -1
Query: 474 DSKIKEVYDSRVHFEFVNRMVMTAMWCLQERPEMRPTMGKVAKMLEGTAEITEPKKP 304
D+++ E D V E V RMV T+ WC+QE+P RPTMGKV +MLEG EI P P
Sbjct: 714 DTRLSE--DQTVDMEQVMRMVKTSFWCIQEQPLQRPTMGKVVQMLEGITEIKNPLCP 768
>gb|AAA32858.1| receptor-like protein kinase
Length = 797
Score = 57.8 bits (138), Expect = 6e-08
Identities = 27/58 (46%), Positives = 36/58 (61%), Gaps = 4/58 (6%)
Frame = -1
Query: 465 IKEVYDSRVHFEF----VNRMVMTAMWCLQERPEMRPTMGKVAKMLEGTAEITEPKKP 304
+ V DSR++ E+ V RM A+WC+Q+ E+RP MG V KMLEG E+T P P
Sbjct: 693 VDSVVDSRLNGEYNTEEVTRMATVAIWCIQDNEEIRPAMGTVVKMLEGVVEVTVPPPP 750
>pir||T01537 S-receptor kinase (EC 2.7.1.-) homolog 1 precursor - Arabidopsis
thaliana gi|2252839|gb|AAB62838.1| Similar to
receptor-like protein kinase precusor [Arabidopsis
thaliana] gi|6049881|gb|AAF02796.1|AF195115_16 Similar
to receptor-like protein kinase precusor; F5I10.19
[Arabidopsis thaliana] gi|7267121|emb|CAB80792.1|
Similar to receptor-like protein kinase precusor~strong
similarity to similarity to S-domain receptor-like
protein kinase, Zea mays~Contains Protein kinases
signatures and profile AA488-511;Protein kinases
signatures and profile AA602-614~contains EST
gb:AW004373.1, AI999273.1 [Arabidopsis thaliana]
Length = 790
Score = 57.8 bits (138), Expect = 6e-08
Identities = 27/58 (46%), Positives = 36/58 (61%), Gaps = 4/58 (6%)
Frame = -1
Query: 465 IKEVYDSRVHFEF----VNRMVMTAMWCLQERPEMRPTMGKVAKMLEGTAEITEPKKP 304
+ V DSR++ E+ V RM A+WC+Q+ E+RP MG V KMLEG E+T P P
Sbjct: 686 VDSVVDSRLNGEYNTEEVTRMATVAIWCIQDNEEIRPAMGTVVKMLEGVVEVTVPPPP 743
>gb|AAM08424.1|AC112513_10 Putative S-receptor kinase [Oryza sativa]
Length = 655
Score = 53.1 bits (126), Expect = 1e-06
Identities = 24/53 (45%), Positives = 32/53 (60%)
Frame = -1
Query: 459 EVYDSRVHFEFVNRMVMTAMWCLQERPEMRPTMGKVAKMLEGTAEITEPKKPT 301
E YDS MV TA+WC+Q + RP+M KV +ML+GT +I EP P+
Sbjct: 541 EAYDSARSMATAEHMVKTALWCMQFSADHRPSMQKVVEMLQGTIDIDEPPNPS 593
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 407,199,622
Number of Sequences: 1393205
Number of extensions: 8761265
Number of successful extensions: 25665
Number of sequences better than 10.0: 421
Number of HSP's better than 10.0 without gapping: 24870
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25658
length of database: 448,689,247
effective HSP length: 113
effective length of database: 291,257,082
effective search space used: 12815311608
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
