Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004758A_C01 KMC004758A_c01
(399 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EAA16435.1| putative yir4 protein [Plasmodium yoelii yoelii] 33 0.66
gb|AAD03793.1| Tc1-like transposase [Anopheles gambiae] 33 1.1
gb|EAA08715.1| ebiP369 [Anopheles gambiae str. PEST] 33 1.1
ref|NP_193173.1| disease resistance protein (TIR-NBS-LRR class),... 31 4.2
ref|NP_031473.1| angiogenin [Mus musculus] gi|113874|sp|P21570|A... 31 4.2
>gb|EAA16435.1| putative yir4 protein [Plasmodium yoelii yoelii]
Length = 299
Score = 33.5 bits (75), Expect = 0.66
Identities = 20/61 (32%), Positives = 34/61 (54%), Gaps = 5/61 (8%)
Frame = +3
Query: 153 KAFFTSSTIADS-KNKCRDRQQMTFPS----RKKEHTFEFPTQYNTPCICNSTGIPQTET 317
K FT ST ++ KN+C+D Q + FPS + ++T + P + + + NS IP + +
Sbjct: 195 KILFTLSTDYNNLKNECKDAQDVVFPSLPEIKTSQNTTKIPGETSDKNVQNSDVIPSSSS 254
Query: 318 I 320
I
Sbjct: 255 I 255
>gb|AAD03793.1| Tc1-like transposase [Anopheles gambiae]
Length = 260
Score = 32.7 bits (73), Expect = 1.1
Identities = 22/70 (31%), Positives = 31/70 (43%), Gaps = 7/70 (10%)
Frame = +1
Query: 40 KAHKYKSNTKYLLHCNIKVYTRDCTKWE-------VKGTKNIEGIRHSLLRQL*PIAKTS 198
+A+ K+ K L H V C W +KGT N+EG R L R++ P A+
Sbjct: 93 QAYHPKNTIKTLKHGGGHVMVWGCFSWHGPGPLFRIKGTLNLEGYRKILRRKMLPYARQK 152
Query: 199 AGIDNR*HFQ 228
G + FQ
Sbjct: 153 FGDEEHYIFQ 162
>gb|EAA08715.1| ebiP369 [Anopheles gambiae str. PEST]
Length = 260
Score = 32.7 bits (73), Expect = 1.1
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Frame = +1
Query: 40 KAHKYKSNTKYLLHCNIKVYTRDCTKWE-------VKGTKNIEGIRHSLLRQL*PIAKTS 198
+A+ K+ K L H V C W +KGT N+EG R+ L R++ P A+
Sbjct: 93 QAYHPKNTIKTLSHGGGHVMVWGCFSWHGPGPLFRIKGTLNLEGYRNILRRKMLPHARQQ 152
Query: 199 AGIDNR*HFQ 228
G + FQ
Sbjct: 153 FGDEEHYIFQ 162
>ref|NP_193173.1| disease resistance protein (TIR-NBS-LRR class), putative; protein id:
At4g14370.1 [Arabidopsis thaliana] gi|7488217|pir||F71405
probable TMV resistance protein - Arabidopsis thaliana
gi|2244793|emb|CAB10216.1| disease resistance N like
protein [Arabidopsis thaliana] gi|7268142|emb|CAB78479.1|
disease resistance N like protein [Arabidopsis thaliana]
Length = 1996
Score = 30.8 bits (68), Expect = 4.2
Identities = 18/55 (32%), Positives = 27/55 (48%)
Frame = +3
Query: 228 SRKKEHTFEFPTQYNTPCICNSTGIPQTETISKAPHQINNYATCINLRWQQKPRR 392
+R K+ E P +++ C STG P T +I AP+ T I+L Q P +
Sbjct: 1082 NRNKQAKSEIPEIHDSDCF--STGRPSTASIDFAPNNTRRGRTSIDLGIQNSPTK 1134
>ref|NP_031473.1| angiogenin [Mus musculus] gi|113874|sp|P21570|ANGI_MOUSE Angiogenin
precursor (Ribonuclease 5) (RNase 5)
gi|109559|pir||A35932 angiogenin precursor - mouse
gi|726326|gb|AAA91366.1| angiogenin precursor
Length = 145
Score = 30.8 bits (68), Expect = 4.2
Identities = 29/95 (30%), Positives = 41/95 (42%), Gaps = 11/95 (11%)
Frame = +3
Query: 135 QEH*RYKAFFTSSTIADSKNKCRD---------RQQMTFPSRKKEHTFEFPTQYNTPCIC 287
Q+ RY F T D+K K RD R+ +T P K +TF + N IC
Sbjct: 25 QDDSRYTKFLTQHH--DAKPKGRDDRYCERMMKRRSLTSPC-KDVNTFIHGNKSNIKAIC 81
Query: 288 NSTGIPQTETI--SKAPHQINNYATCINLRWQQKP 386
+ G P E + SK+P Q+ TC + +P
Sbjct: 82 GANGSPYRENLRMSKSPFQV---TTCKHTGGSPRP 113
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 331,638,575
Number of Sequences: 1393205
Number of extensions: 6796657
Number of successful extensions: 17521
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 17074
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17510
length of database: 448,689,247
effective HSP length: 108
effective length of database: 298,223,107
effective search space used: 7157354568
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
