Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004745A_C01 KMC004745A_c01
(600 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T08816 choline kinase (EC 2.7.1.32) CK2 - soybean gi|143888... 229 3e-59
pir||T08815 choline kinase (EC 2.7.1.32) CK1 - soybean gi|143887... 218 6e-56
emb|CAC24490.1| choline kinase [Pisum sativum] 200 1e-50
pir||T08817 choline kinase (EC 2.7.1.32) CK3 - soybean (fragment... 181 8e-45
ref|NP_192714.1| choline kinase GmCK2p -like protein; protein id... 181 8e-45
>pir||T08816 choline kinase (EC 2.7.1.32) CK2 - soybean
gi|1438881|gb|AAC49375.1| GmCK2p
Length = 362
Score = 229 bits (583), Expect = 3e-59
Identities = 107/119 (89%), Positives = 112/119 (93%)
Frame = -2
Query: 599 ASYNPIAYDLANHFCEMVADYHSDTPHVLDYSKYPGLEERQRFIRIYLSSQGKKPNNAKV 420
ASYNPIAYDLANHFCEMVADYHSDTPHVLDY+KYPGLEERQRFIR YLSS+G KP+NAKV
Sbjct: 229 ASYNPIAYDLANHFCEMVADYHSDTPHVLDYTKYPGLEERQRFIRNYLSSEGNKPSNAKV 288
Query: 419 IQLVNAAEKYTLAYHLFWGLWGLISSYVNKIDFDYKEYARQRFQQYWLRKPTLLDTQSI 243
QL AAEKYTLA HLFWGLWGLISSYVNKIDFDYKEYARQRFQQYW+RKPTLLD+ SI
Sbjct: 289 NQLAKAAEKYTLANHLFWGLWGLISSYVNKIDFDYKEYARQRFQQYWIRKPTLLDSPSI 347
>pir||T08815 choline kinase (EC 2.7.1.32) CK1 - soybean
gi|1438879|gb|AAC49374.1| GmCK1p
Length = 359
Score = 218 bits (554), Expect = 6e-56
Identities = 101/119 (84%), Positives = 110/119 (91%)
Frame = -2
Query: 599 ASYNPIAYDLANHFCEMVADYHSDTPHVLDYSKYPGLEERQRFIRIYLSSQGKKPNNAKV 420
ASYNPI YDLANHFCEMVA+YHSD PHVLDYSKYPGLEERQRF+ YLSS+GKKP+N++V
Sbjct: 229 ASYNPIGYDLANHFCEMVANYHSDEPHVLDYSKYPGLEERQRFVYNYLSSEGKKPSNSEV 288
Query: 419 IQLVNAAEKYTLAYHLFWGLWGLISSYVNKIDFDYKEYARQRFQQYWLRKPTLLDTQSI 243
QLVN AEKYTLA HLFWGLWGLISS+VN IDFDYKEYARQRFQQYWL+KPTLLD+ SI
Sbjct: 289 DQLVNLAEKYTLANHLFWGLWGLISSHVNTIDFDYKEYARQRFQQYWLKKPTLLDSPSI 347
>emb|CAC24490.1| choline kinase [Pisum sativum]
Length = 343
Score = 200 bits (508), Expect = 1e-50
Identities = 90/114 (78%), Positives = 101/114 (87%)
Frame = -2
Query: 599 ASYNPIAYDLANHFCEMVADYHSDTPHVLDYSKYPGLEERQRFIRIYLSSQGKKPNNAKV 420
+SYNP+AYDLANHFCEM ADYHSDTPHVLDY+KYP LEER+RFI YLSS+G+KP+ +V
Sbjct: 229 SSYNPVAYDLANHFCEMAADYHSDTPHVLDYTKYPDLEERRRFIHTYLSSEGEKPSEGEV 288
Query: 419 IQLVNAAEKYTLAYHLFWGLWGLISSYVNKIDFDYKEYARQRFQQYWLRKPTLL 258
QLVN EKYTLA HLFWGLWGLIS+YVN IDFDYKEY+RQRFQQYWL+K LL
Sbjct: 289 EQLVNVVEKYTLANHLFWGLWGLISNYVNTIDFDYKEYSRQRFQQYWLKKVILL 342
>pir||T08817 choline kinase (EC 2.7.1.32) CK3 - soybean (fragment)
gi|1438883|gb|AAC49376.1| GmCK3p
Length = 497
Score = 181 bits (458), Expect = 8e-45
Identities = 76/114 (66%), Positives = 99/114 (86%)
Frame = -2
Query: 599 ASYNPIAYDLANHFCEMVADYHSDTPHVLDYSKYPGLEERQRFIRIYLSSQGKKPNNAKV 420
ASYNP+A+D+ANHFCEM A+YH++ PH+LDY+KYP EERQRF++ YLS+ G++P++++V
Sbjct: 336 ASYNPVAFDIANHFCEMAANYHTEEPHILDYNKYPDFEERQRFVQAYLSTSGEQPSDSEV 395
Query: 419 IQLVNAAEKYTLAYHLFWGLWGLISSYVNKIDFDYKEYARQRFQQYWLRKPTLL 258
QL+ EKYTLA HLFWG+WG+IS+ VN IDFDYKEYA+QRFQ+YW RKP LL
Sbjct: 396 EQLLQEIEKYTLANHLFWGVWGIISAQVNTIDFDYKEYAKQRFQEYWARKPYLL 449
>ref|NP_192714.1| choline kinase GmCK2p -like protein; protein id: At4g09760.2,
supported by cDNA: 126037., supported by cDNA: 7395.
[Arabidopsis thaliana] gi|7484868|pir||T04023 choline
kinase 2 homolog F17A8.110 - Arabidopsis thaliana
gi|4538906|emb|CAB39643.1| choline kinase GmCK2p-like
protein [Arabidopsis thaliana]
gi|7267671|emb|CAB78099.1| choline kinase GmCK2p-like
protein [Arabidopsis thaliana]
Length = 346
Score = 181 bits (458), Expect = 8e-45
Identities = 81/114 (71%), Positives = 96/114 (84%)
Frame = -2
Query: 599 ASYNPIAYDLANHFCEMVADYHSDTPHVLDYSKYPGLEERQRFIRIYLSSQGKKPNNAKV 420
ASYNPIAYD+ANHFCEM ADYHS+TPH+LDY+ YPG EER+RFI YL+S G++ +
Sbjct: 228 ASYNPIAYDIANHFCEMAADYHSNTPHILDYTLYPGEEERRRFICNYLTSSGEEAREEDI 287
Query: 419 IQLVNAAEKYTLAYHLFWGLWGLISSYVNKIDFDYKEYARQRFQQYWLRKPTLL 258
QL++ EKYTLA HLFWGLWG+IS YVNKI+FDY EY+RQRF+QYWLRKP LL
Sbjct: 288 EQLLDDIEKYTLASHLFWGLWGIISGYVNKIEFDYIEYSRQRFKQYWLRKPKLL 341
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 484,726,284
Number of Sequences: 1393205
Number of extensions: 9926299
Number of successful extensions: 18240
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 17753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18158
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 23426109484
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
