Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004736A_C01 KMC004736A_c01
(570 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_195849.1| serine/threonine-specific protein kinase NAK; p... 84 1e-15
gb|AAA18853.1| protein kinase 84 1e-15
dbj|BAB63697.1| putative serine/threonine-specific protein kinas... 84 1e-15
gb|AAO18450.1| putative protein kinase [Oryza sativa (japonica c... 83 3e-15
gb|AAK73157.1|AC079022_30 putative protein kinase [Oryza sativa] 82 4e-15
>ref|NP_195849.1| serine/threonine-specific protein kinase NAK; protein id:
At5g02290.1, supported by cDNA: 27477., supported by
cDNA: gi_166808 [Arabidopsis thaliana]
gi|21431784|sp|P43293|NAK_ARATH Probable
serine/threonine-protein kinase NAK
gi|11376624|pir||T48250 serine/threonine-specific
protein kinase NAK (EC 2.7.1.-) - Arabidopsis thaliana
gi|7406425|emb|CAB85534.1| serine/threonine-specific
protein kinase NAK [Arabidopsis thaliana]
gi|21555255|gb|AAM63816.1| serine/threonine-specific
protein kinase NAK [Arabidopsis thaliana]
Length = 389
Score = 84.0 bits (206), Expect = 1e-15
Identities = 44/103 (42%), Positives = 63/103 (60%)
Frame = -2
Query: 569 PYLSNKRRVFRVMDPRLEGQYSHSRAQAVAALAMRCLDVEPKCRPGMDEVVKALEQLQEP 390
PYL+NKRR+ RVMDPRL+GQYS +RA +A LA+ C+ ++ K RP M+E+VK +E+L
Sbjct: 297 PYLTNKRRLLRVMDPRLQGQYSLTRALKIAVLALDCISIDAKSRPTMNEIVKTMEELHIQ 356
Query: 389 KDTQKKGADPKGDRVRGSGLNHQASGKGGADATRKATAYPRPS 261
K+ K+ +P Q S + + +A YPRPS
Sbjct: 357 KEASKEQQNP------------QISIDNIINKSPQAVNYPRPS 387
>gb|AAA18853.1| protein kinase
Length = 389
Score = 84.0 bits (206), Expect = 1e-15
Identities = 44/103 (42%), Positives = 63/103 (60%)
Frame = -2
Query: 569 PYLSNKRRVFRVMDPRLEGQYSHSRAQAVAALAMRCLDVEPKCRPGMDEVVKALEQLQEP 390
PYL+NKRR+ RVMDPRL+GQYS +RA +A LA+ C+ ++ K RP M+E+VK +E+L
Sbjct: 297 PYLTNKRRLLRVMDPRLQGQYSLTRALKIAVLALDCISIDAKSRPTMNEIVKTMEELHIQ 356
Query: 389 KDTQKKGADPKGDRVRGSGLNHQASGKGGADATRKATAYPRPS 261
K+ K+ +P Q S + + +A YPRPS
Sbjct: 357 KEASKEQQNP------------QISIDNIINKSPQAVNYPRPS 387
>dbj|BAB63697.1| putative serine/threonine-specific protein kinase [Oryza sativa
(japonica cultivar-group)] gi|20160935|dbj|BAB89871.1|
putative serine/threonine-specific protein kinase [Oryza
sativa (japonica cultivar-group)]
Length = 467
Score = 84.0 bits (206), Expect = 1e-15
Identities = 48/106 (45%), Positives = 64/106 (60%), Gaps = 3/106 (2%)
Frame = -2
Query: 569 PYLSNKRRVFRVMDPRLEGQYSHSRAQAVAALAMRCLDVEPKCRPGMDEVVKALEQLQEP 390
PYLS++RR+FR++D RL GQYS + A AALA++CL + K RP M +VV ALEQLQE
Sbjct: 363 PYLSSRRRIFRILDARLAGQYSLAGAHKAAALALQCLSADAKNRPTMHQVVAALEQLQET 422
Query: 389 KDTQKKGADPKGDRVRGSGLNHQASGKGGADA---TRKATAYPRPS 261
T P+ + G G ASG+ A A R+ +A P P+
Sbjct: 423 TTTSHHHRSPQSRMLLG-GRGFNASGRSSAGAGARPRRLSASPLPA 467
>gb|AAO18450.1| putative protein kinase [Oryza sativa (japonica cultivar-group)]
Length = 416
Score = 82.8 bits (203), Expect = 3e-15
Identities = 41/80 (51%), Positives = 54/80 (67%), Gaps = 1/80 (1%)
Frame = -2
Query: 569 PYLSNKRRVFRVMDPRLEGQYSHSRAQAVAALAMRCLDVEPKCRPGMDEVVKALEQLQEP 390
PYL++KR++FRV+D RLEGQYSH AQ VA LA+ CL E K RP M+ VV LE+LQE
Sbjct: 307 PYLTHKRKIFRVLDTRLEGQYSHVGAQTVATLALECLSYEAKMRPSMEAVVTILEELQES 366
Query: 389 KDTQKK-GADPKGDRVRGSG 333
+K A+ + + G+G
Sbjct: 367 SHVDRKPAAERRQESTTGTG 386
>gb|AAK73157.1|AC079022_30 putative protein kinase [Oryza sativa]
Length = 395
Score = 82.4 bits (202), Expect = 4e-15
Identities = 44/98 (44%), Positives = 65/98 (65%)
Frame = -2
Query: 569 PYLSNKRRVFRVMDPRLEGQYSHSRAQAVAALAMRCLDVEPKCRPGMDEVVKALEQLQEP 390
PYL +KRR+FR++D RL GQYS ++AQ A LA++C+ VE K RP M++VV LEQLQ+
Sbjct: 299 PYLMSKRRIFRILDARLGGQYSLAKAQKAATLALQCISVEAKNRPNMEQVVAVLEQLQDS 358
Query: 389 KDTQKKGADPKGDRVRGSGLNHQASGKGGADATRKATA 276
K+T GA+P+ + + S N ++G + + A A
Sbjct: 359 KET---GANPQLQK-KSSSKNAGSNGSKPSSKGKPANA 392
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 499,566,836
Number of Sequences: 1393205
Number of extensions: 10934159
Number of successful extensions: 33160
Number of sequences better than 10.0: 534
Number of HSP's better than 10.0 without gapping: 31780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33083
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 20956655091
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
