Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004718A_C01 KMC004718A_c01
(383 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q02028|HS7S_PEA Stromal 70 kDa heat shock-related protein, ch... 59 1e-08
prf||1909352A heat shock protein hsp70 59 1e-08
pir||T08899 dnaK-type molecular chaperone HSC70-9, chloroplast -... 51 3e-06
pir||T10248 heat shock protein, 70K, chloroplast - cucumber gi|1... 50 7e-06
gb|AAC03416.1| heat shock protein 70 precursor [Citrullus lanatus] 50 9e-06
>sp|Q02028|HS7S_PEA Stromal 70 kDa heat shock-related protein, chloroplast precursor
gi|421881|pir||S32818 dnaK-type molecular chaperone CSS1
precursor, chloroplast - garden pea
gi|169023|gb|AAA33637.1| 70 kDa heat shock protein
gi|871515|emb|CAA49147.1| Psst70 (stress 70 protein)
[Pisum sativum]
Length = 706
Score = 58.9 bits (141), Expect = 1e-08
Identities = 29/39 (74%), Positives = 31/39 (79%)
Frame = -1
Query: 377 ATGPGGPTPPGPESGSSESPSSGKGPDGDVIDADFTDSK 261
A G GPTPPG ESG SES S +GP+GDVIDADFTDSK
Sbjct: 669 AAGQAGPTPPGSESGPSES-SGKEGPEGDVIDADFTDSK 706
>prf||1909352A heat shock protein hsp70
Length = 706
Score = 58.9 bits (141), Expect = 1e-08
Identities = 29/39 (74%), Positives = 31/39 (79%)
Frame = -1
Query: 377 ATGPGGPTPPGPESGSSESPSSGKGPDGDVIDADFTDSK 261
A G GPTPPG ESG SES S +GP+GDVIDADFTDSK
Sbjct: 669 AAGQAGPTPPGSESGPSES-SGKEGPEGDVIDADFTDSK 706
>pir||T08899 dnaK-type molecular chaperone HSC70-9, chloroplast - spinach
gi|2654208|gb|AAB91471.1| heat shock 70 protein
[Spinacia oleracea] gi|2773050|gb|AAB96659.1| heat shock
70 protein [Spinacia oleracea]
Length = 715
Score = 51.2 bits (121), Expect = 3e-06
Identities = 30/43 (69%), Positives = 32/43 (73%), Gaps = 2/43 (4%)
Frame = -1
Query: 383 GAATGPG-GPTP-PGPESGSSESPSSGKGPDGDVIDADFTDSK 261
GA PG GP P PG ESG S+S S KGP+GDVIDADFTDSK
Sbjct: 675 GAGGEPGAGPGPTPGAESGPSDSTS--KGPEGDVIDADFTDSK 715
>pir||T10248 heat shock protein, 70K, chloroplast - cucumber
gi|1143427|emb|CAA52149.1| heat shock protein 70
[Cucumis sativus]
Length = 707
Score = 50.1 bits (118), Expect = 7e-06
Identities = 25/41 (60%), Positives = 29/41 (69%)
Frame = -1
Query: 383 GAATGPGGPTPPGPESGSSESPSSGKGPDGDVIDADFTDSK 261
GAA GPG + GP S S+GKGP+GDVIDADF+DSK
Sbjct: 673 GAAPGPGASSESGP------SESTGKGPEGDVIDADFSDSK 707
>gb|AAC03416.1| heat shock protein 70 precursor [Citrullus lanatus]
Length = 705
Score = 49.7 bits (117), Expect = 9e-06
Identities = 28/41 (68%), Positives = 30/41 (72%)
Frame = -1
Query: 383 GAATGPGGPTPPGPESGSSESPSSGKGPDGDVIDADFTDSK 261
GAA G G G ESG SES +GKGP+GDVIDADFTDSK
Sbjct: 671 GAAPGAGA----GSESGPSES--TGKGPEGDVIDADFTDSK 705
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 344,309,342
Number of Sequences: 1393205
Number of extensions: 7478857
Number of successful extensions: 51743
Number of sequences better than 10.0: 183
Number of HSP's better than 10.0 without gapping: 33517
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50302
length of database: 448,689,247
effective HSP length: 103
effective length of database: 305,189,132
effective search space used: 7324539168
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
