Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004713A_C01 KMC004713A_c01
(638 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_195407.1| UDP-glucuronyltransferase-like protein; protein... 115 4e-25
gb|AAM98177.1| unknown protein [Arabidopsis thaliana] 115 4e-25
ref|NP_201524.1| UDP-glucuronyltransferase-like protein; protein... 101 7e-21
dbj|BAB20991.1| UDP-glucuronyltransferase-l [Oryza sativa (japon... 96 3e-19
gb|AAF21601.1|AF009222_1 kexin-like serine endoprotease [Pneumoc... 35 0.64
>ref|NP_195407.1| UDP-glucuronyltransferase-like protein; protein id: At4g36890.1
[Arabidopsis thaliana] gi|25407772|pir||F85435
UDP-glucuronyltransferase-like protein [imported] -
Arabidopsis thaliana gi|4006882|emb|CAB16800.1|
UDP-glucuronyltransferase-like protein [Arabidopsis
thaliana] gi|7270638|emb|CAB80355.1|
UDP-glucuronyltransferase-like protein [Arabidopsis
thaliana]
Length = 544
Score = 115 bits (289), Expect = 4e-25
Identities = 61/117 (52%), Positives = 72/117 (61%), Gaps = 11/117 (9%)
Frame = -1
Query: 638 LGTCGRQVLLWWLRVEARTDSKFPPQWIIDPPLDITVPSKRTPWPDAPPEHPVKEK---- 471
LG+CGRQVLLWWLRVEAR DSKFPP WIIDPPL+ITV +KRTPWPD PPE P K+K
Sbjct: 431 LGSCGRQVLLWWLRVEARADSKFPPGWIIDPPLEITVAAKRTPWPDVPPEPPTKKKDQMP 490
Query: 470 -------VLIGTQEQTTKHSTKTRTSRSRHARSKRKHDTKVIGVQVSAHSKSEQN*N 321
V+I Q+Q H TK R + + +SK + QV + S Q N
Sbjct: 491 LSQGNTVVVIPKQQQ---HPTKIRKPKRKSKKSKHEPRPTDTTTQVYSSSSKHQERN 544
>gb|AAM98177.1| unknown protein [Arabidopsis thaliana]
Length = 525
Score = 115 bits (289), Expect = 4e-25
Identities = 61/117 (52%), Positives = 72/117 (61%), Gaps = 11/117 (9%)
Frame = -1
Query: 638 LGTCGRQVLLWWLRVEARTDSKFPPQWIIDPPLDITVPSKRTPWPDAPPEHPVKEK---- 471
LG+CGRQVLLWWLRVEAR DSKFPP WIIDPPL+ITV +KRTPWPD PPE P K+K
Sbjct: 412 LGSCGRQVLLWWLRVEARADSKFPPGWIIDPPLEITVAAKRTPWPDVPPEPPTKKKDQMP 471
Query: 470 -------VLIGTQEQTTKHSTKTRTSRSRHARSKRKHDTKVIGVQVSAHSKSEQN*N 321
V+I Q+Q H TK R + + +SK + QV + S Q N
Sbjct: 472 LSQGNTVVVIPKQQQ---HPTKIRKPKRKSKKSKHEPRPTDTTTQVYSSSSKHQERN 525
>ref|NP_201524.1| UDP-glucuronyltransferase-like protein; protein id: At5g67230.1,
supported by cDNA: gi_17979150 [Arabidopsis thaliana]
gi|10177610|dbj|BAB10957.1|
UDP-glucuronyltransferase-like protein [Arabidopsis
thaliana] gi|17979151|gb|AAL49771.1| putative
UDP-glucuronyltransferase [Arabidopsis thaliana]
Length = 492
Score = 101 bits (252), Expect = 7e-21
Identities = 55/100 (55%), Positives = 66/100 (66%), Gaps = 1/100 (1%)
Frame = -1
Query: 638 LGTCGRQVLLWWLRVEARTDSKFPPQWIIDPPLDITVPSKRTPWPDAPPEHPVKEKVLIG 459
LG+CGR+VLLWWLRVEAR DSKFPP WII PL+ITVPSKRTPWPD+ E P
Sbjct: 402 LGSCGRRVLLWWLRVEARADSKFPPGWIIKSPLEITVPSKRTPWPDSSSELP-------A 454
Query: 458 TQEQTTKHSTKTRTSRSRHARSKRKHDTKVI-GVQVSAHS 342
+ K ++K R S+S+ K K + K GV+VSA S
Sbjct: 455 AAIKEAKSNSKPRVSKSK--SYKEKQEPKAFDGVKVSATS 492
>dbj|BAB20991.1| UDP-glucuronyltransferase-l [Oryza sativa (japonica
cultivar-group)]
Length = 263
Score = 96.3 bits (238), Expect = 3e-19
Identities = 46/88 (52%), Positives = 65/88 (73%), Gaps = 1/88 (1%)
Frame = -1
Query: 638 LGTCGRQVLLWWLRVEARTDSKFPPQWIIDPPLDITVPSKRTPWPDAPPEHPVKEKVLIG 459
LG CG+++LLWWLRVEAR DSKFP W+I+PPLDI VP+KRTPWP+ E + +++
Sbjct: 179 LGNCGKKILLWWLRVEARADSKFPQGWVIEPPLDIVVPAKRTPWPETTAE--LSAELVDS 236
Query: 458 TQEQTTKHSTKT-RTSRSRHARSKRKHD 378
Q+Q + ++T R+SRSR + +KRK +
Sbjct: 237 KQDQEGRRLSRTDRSSRSR-STTKRKEN 263
>gb|AAF21601.1|AF009222_1 kexin-like serine endoprotease [Pneumocystis carinii]
Length = 493
Score = 35.4 bits (80), Expect = 0.64
Identities = 22/65 (33%), Positives = 29/65 (43%)
Frame = -1
Query: 569 PPQWIIDPPLDITVPSKRTPWPDAPPEHPVKEKVLIGTQEQTTKHSTKTRTSRSRHARSK 390
PPQ PP P P P PP P ++K T +T S+KT+ S +R A S
Sbjct: 383 PPQ--PQPPQPQPEPPAXPPKPQPPPPSPPEQKPTSITSSTSTTSSSKTKISTTRKASST 440
Query: 389 RKHDT 375
+ T
Sbjct: 441 KASST 445
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 554,677,102
Number of Sequences: 1393205
Number of extensions: 12229865
Number of successful extensions: 36043
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 33990
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35995
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 26723359358
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
