Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004712A_C01 KMC004712A_c01
(542 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_067375.1| proteoglycan 4 (megakaryocyte stimulating facto... 44 0.002
pir||T29757 protein UNC-89 - Caenorhabditis elegans 41 0.008
gb|AAB00542.1| UNC-89 41 0.008
ref|NP_491290.2| UNCoordinated locomotion UNC-89, PHarynx Muscle... 41 0.008
gb|AAO51859.1| similar to Homo sapiens (Human). Mucin 2 precurso... 40 0.014
>ref|NP_067375.1| proteoglycan 4 (megakaryocyte stimulating factor, articular
superficial zone protein); proteoglycan 3 (megakaryocyte
stimulating factor, articular superficial zone protein)
[Mus musculus] gi|7209719|dbj|BAA92310.1| This gene is
isolated by means of differential display method using
ttw, an excellent mouse model for ectopic
ossification.~similar to megakaryocyte stimulating
factor precursor and cartilage superficial zone protein
[Mus musculus]
Length = 1054
Score = 43.5 bits (101), Expect = 0.002
Identities = 30/115 (26%), Positives = 53/115 (46%)
Frame = +1
Query: 163 KKAHIKPLVPTPTEKVPIEIDKTTTSSTNTGTYQAARNPQTETKSAEKTKSPTMLKTQQN 342
K + P V P E++ + ++TT +S ++ + PQ TK+ + TK PT +
Sbjct: 626 KATTLAPKVTAPAEEIQNKPEETTPASEDSDDSKTTLKPQKPTKAPKPTKKPTKAPKKPT 685
Query: 343 AIEQKPIT*KRAENKQEKPSKTTHDSAHKASTTSPELQIQHTKIQEP*KYPNTAK 507
+ +KP T K + K T + + +TT E+ + T I + P TA+
Sbjct: 686 S-TKKPKTPKTRKPKTTPAPLKTTSATPELNTTPLEVMLPTTTIPKQTPNPETAE 739
Score = 31.2 bits (69), Expect = 8.5
Identities = 33/133 (24%), Positives = 47/133 (34%), Gaps = 16/133 (12%)
Frame = +1
Query: 163 KKAHIKPLVPTPT----------------EKVPIEIDKTTTSSTNTGTYQAARNPQTETK 294
K KP+ P P+ ++ +E +TT ++ + + ET+
Sbjct: 248 KTTAAKPVTPKPSLAPNSETSKEASLASNKETTVETKETTATNKQSSASKKKTTSVKETR 307
Query: 295 SAEKTKSPTMLKTQQNAIEQKPIT*KRAENKQEKPSKTTHDSAHKASTTSPELQIQHTKI 474
SAEKT + T P T K KP TT +S PE T
Sbjct: 308 SAEKTSDKDVEPTSTTPKNSAPTTTK-------KPVTTTKESKFLPLPQEPE----PTTA 356
Query: 475 QEP*KYPNTAKTP 513
+EP P T K P
Sbjct: 357 KEP---PPTTKKP 366
>pir||T29757 protein UNC-89 - Caenorhabditis elegans
Length = 6642
Score = 41.2 bits (95), Expect = 0.008
Identities = 30/116 (25%), Positives = 52/116 (43%), Gaps = 9/116 (7%)
Frame = +1
Query: 202 EKVPIEIDKTTTSSTNTGTYQAARNPQTETKSAEKTKSPTMLKTQQNAIEQKPIT*KRAE 381
EK P ++D+ S T ++ E E+ KSP + +E+KP + + E
Sbjct: 1529 EKTPEKVDEKPKSPTK-------KDKSPEKSITEEIKSPVKKEKSPEKVEEKPASPTKKE 1581
Query: 382 NKQEKPSKTTHDSAHKAST-----TSPEL----QIQHTKIQEP*KYPNTAKTPSKK 522
EKP+ T S ++ + SPE +++ K + P K + K+P+KK
Sbjct: 1582 KSPEKPASPTKKSENEVKSPTKKEKSPEKSVVEELKSPKEKSPEKADDKPKSPTKK 1637
Score = 41.2 bits (95), Expect = 0.008
Identities = 39/150 (26%), Positives = 58/150 (38%), Gaps = 27/150 (18%)
Frame = +1
Query: 154 KCAKKAHIKPLVPTPTEKVP----IEIDKTTTSSTNTGTYQAARNPQTETKSA------- 300
K +KA KP PT EK P E K+ T + A P++ TK
Sbjct: 1725 KSPEKAEEKPKSPTKKEKSPEKSAAEEVKSPTKKEKSPEKSAEEKPKSPTKKESSPVKMA 1784
Query: 301 -EKTKSPTMLKTQQNAIEQKPIT*KRAE---------------NKQEKPSKTTHDSAHKA 432
++ KSPT + +E+KP + + E K++ PS T + ++
Sbjct: 1785 DDEVKSPTKKEKSPEKVEEKPASPTKKEKTPEKSAAEELKSPTKKEKSPSSPTKKTGDES 1844
Query: 433 STTSPELQIQHTKIQEP*KYPNTAKTPSKK 522
SPE + K P K P +P KK
Sbjct: 1845 KEKSPEKPEEKPKSPTPKKSP--PGSPKKK 1872
Score = 38.9 bits (89), Expect = 0.041
Identities = 30/113 (26%), Positives = 48/113 (41%), Gaps = 1/113 (0%)
Frame = +1
Query: 190 PTPTEKVPIEIDKTTTSSTNTGTYQAARNPQTETKSAEKTKSPTMLKTQQNAIEQKPIT* 369
PT EK P ++++ TS T + K+ ++ KSPT + +E+KP +
Sbjct: 1652 PTKKEKSPEKVEEKPTSPTK-------KESSPTKKTDDEVKSPTKKEKSPQTVEEKPAS- 1703
Query: 370 KRAENKQEKPSKTTHDSAHKASTTSPELQIQHTKIQEP*KYP-NTAKTPSKKA 525
K++ P K+ + SPE K +E K P K+P K A
Sbjct: 1704 --PTKKEKSPEKSVVEEVKSPKEKSPE------KAEEKPKSPTKKEKSPEKSA 1748
Score = 35.4 bits (80), Expect = 0.45
Identities = 35/134 (26%), Positives = 53/134 (39%), Gaps = 20/134 (14%)
Frame = +1
Query: 181 PLVPTPTEKVPIEID------KTTTSSTNTGTYQAARNPQTETKSAEKTKSPTMLKTQQN 342
P PT EK P + K + S+ T ++ +P +T K KSP T++
Sbjct: 1412 PASPTKKEKSPAAEEVKSPTKKEKSPSSPTKKEKSPSSPTKKTGDEVKEKSPPKSPTKKE 1471
Query: 343 AIEQKPIT*KRAENKQEKP---------SKTTHDSAHKASTT-----SPELQIQHTKIQE 480
+KP K K++ P S+TT + TT S E + K +
Sbjct: 1472 KSPEKPEDVKSPVKKEKSPDATNIVEVSSETTIEKTETTMTTEMTHESEESRTSVKKEKT 1531
Query: 481 P*KYPNTAKTPSKK 522
P K K+P+KK
Sbjct: 1532 PEKVDEKPKSPTKK 1545
Score = 34.3 bits (77), Expect = 1.0
Identities = 31/122 (25%), Positives = 47/122 (38%)
Frame = +1
Query: 154 KCAKKAHIKPLVPTPTEKVPIEIDKTTTSSTNTGTYQAARNPQTETKSAEKTKSPTMLKT 333
K +K+ ++ L +P EK P + D S T + E + E KSPT +
Sbjct: 1606 KSPEKSVVEEL-KSPKEKSPEKADDKPKSPTK-------KEKSPEKSATEDVKSPTKKEK 1657
Query: 334 QQNAIEQKPIT*KRAENKQEKPSKTTHDSAHKASTTSPELQIQHTKIQEP*KYPNTAKTP 513
+E+KP + K+ P+K T D + Q K P K K+P
Sbjct: 1658 SPEKVEEKPTS---PTKKESSPTKKTDDEVKSPTKKEKSPQTVEEKPASPTK---KEKSP 1711
Query: 514 SK 519
K
Sbjct: 1712 EK 1713
Score = 31.2 bits (69), Expect = 8.5
Identities = 33/126 (26%), Positives = 47/126 (37%), Gaps = 3/126 (2%)
Frame = +1
Query: 154 KCAKKAHIKPLVPTPT--EKVPIEIDKTTTSSTNTGTYQAARNPQTETKSAEKTKSPTML 327
K +K KP PT E+V +K+ S T AA ++ TK + SPT
Sbjct: 1384 KSPEKTEEKPASPTKKTGEEVKSPKEKSPASPTKKEKSPAAEEVKSPTKKEKSPSSPT-- 1441
Query: 328 KTQQNAIEQKPIT*KRAENKQEKPSKTTHDSA-HKASTTSPELQIQHTKIQEP*KYPNTA 504
+ E P+K T D K+ SP TK ++ + P
Sbjct: 1442 ---------------KKEKSPSSPTKKTGDEVKEKSPPKSP------TKKEKSPEKPEDV 1480
Query: 505 KTPSKK 522
K+P KK
Sbjct: 1481 KSPVKK 1486
>gb|AAB00542.1| UNC-89
Length = 6632
Score = 41.2 bits (95), Expect = 0.008
Identities = 30/116 (25%), Positives = 52/116 (43%), Gaps = 9/116 (7%)
Frame = +1
Query: 202 EKVPIEIDKTTTSSTNTGTYQAARNPQTETKSAEKTKSPTMLKTQQNAIEQKPIT*KRAE 381
EK P ++D+ S T ++ E E+ KSP + +E+KP + + E
Sbjct: 1529 EKTPEKVDEKPKSPTK-------KDKSPEKSITEEIKSPVKKEKSPEKVEEKPASPTKKE 1581
Query: 382 NKQEKPSKTTHDSAHKAST-----TSPEL----QIQHTKIQEP*KYPNTAKTPSKK 522
EKP+ T S ++ + SPE +++ K + P K + K+P+KK
Sbjct: 1582 KSPEKPASPTKKSENEVKSPTKKEKSPEKSVVEELKSPKEKSPEKADDKPKSPTKK 1637
Score = 41.2 bits (95), Expect = 0.008
Identities = 39/150 (26%), Positives = 58/150 (38%), Gaps = 27/150 (18%)
Frame = +1
Query: 154 KCAKKAHIKPLVPTPTEKVP----IEIDKTTTSSTNTGTYQAARNPQTETKSA------- 300
K +KA KP PT EK P E K+ T + A P++ TK
Sbjct: 1725 KSPEKAEEKPKSPTKKEKSPEKSAAEEVKSPTKKEKSPEKSAEEKPKSPTKKESSPVKMA 1784
Query: 301 -EKTKSPTMLKTQQNAIEQKPIT*KRAE---------------NKQEKPSKTTHDSAHKA 432
++ KSPT + +E+KP + + E K++ PS T + ++
Sbjct: 1785 DDEVKSPTKKEKSPEKVEEKPASPTKKEKTPEKSAAEELKSPTKKEKSPSSPTKKTGDES 1844
Query: 433 STTSPELQIQHTKIQEP*KYPNTAKTPSKK 522
SPE + K P K P +P KK
Sbjct: 1845 KEKSPEKPEEKPKSPTPKKSP--PGSPKKK 1872
Score = 38.9 bits (89), Expect = 0.041
Identities = 30/113 (26%), Positives = 48/113 (41%), Gaps = 1/113 (0%)
Frame = +1
Query: 190 PTPTEKVPIEIDKTTTSSTNTGTYQAARNPQTETKSAEKTKSPTMLKTQQNAIEQKPIT* 369
PT EK P ++++ TS T + K+ ++ KSPT + +E+KP +
Sbjct: 1652 PTKKEKSPEKVEEKPTSPTK-------KESSPTKKTDDEVKSPTKKEKSPQTVEEKPAS- 1703
Query: 370 KRAENKQEKPSKTTHDSAHKASTTSPELQIQHTKIQEP*KYP-NTAKTPSKKA 525
K++ P K+ + SPE K +E K P K+P K A
Sbjct: 1704 --PTKKEKSPEKSVVEEVKSPKEKSPE------KAEEKPKSPTKKEKSPEKSA 1748
Score = 35.4 bits (80), Expect = 0.45
Identities = 35/134 (26%), Positives = 53/134 (39%), Gaps = 20/134 (14%)
Frame = +1
Query: 181 PLVPTPTEKVPIEID------KTTTSSTNTGTYQAARNPQTETKSAEKTKSPTMLKTQQN 342
P PT EK P + K + S+ T ++ +P +T K KSP T++
Sbjct: 1412 PASPTKKEKSPAAEEVKSPTKKEKSPSSPTKKEKSPSSPTKKTGDEVKEKSPPKSPTKKE 1471
Query: 343 AIEQKPIT*KRAENKQEKP---------SKTTHDSAHKASTT-----SPELQIQHTKIQE 480
+KP K K++ P S+TT + TT S E + K +
Sbjct: 1472 KSPEKPEDVKSPVKKEKSPDATNIVEVSSETTIEKTETTMTTEMTHESEESRTSVKKEKT 1531
Query: 481 P*KYPNTAKTPSKK 522
P K K+P+KK
Sbjct: 1532 PEKVDEKPKSPTKK 1545
Score = 34.3 bits (77), Expect = 1.0
Identities = 31/122 (25%), Positives = 47/122 (38%)
Frame = +1
Query: 154 KCAKKAHIKPLVPTPTEKVPIEIDKTTTSSTNTGTYQAARNPQTETKSAEKTKSPTMLKT 333
K +K+ ++ L +P EK P + D S T + E + E KSPT +
Sbjct: 1606 KSPEKSVVEEL-KSPKEKSPEKADDKPKSPTK-------KEKSPEKSATEDVKSPTKKEK 1657
Query: 334 QQNAIEQKPIT*KRAENKQEKPSKTTHDSAHKASTTSPELQIQHTKIQEP*KYPNTAKTP 513
+E+KP + K+ P+K T D + Q K P K K+P
Sbjct: 1658 SPEKVEEKPTS---PTKKESSPTKKTDDEVKSPTKKEKSPQTVEEKPASPTK---KEKSP 1711
Query: 514 SK 519
K
Sbjct: 1712 EK 1713
Score = 31.2 bits (69), Expect = 8.5
Identities = 33/126 (26%), Positives = 47/126 (37%), Gaps = 3/126 (2%)
Frame = +1
Query: 154 KCAKKAHIKPLVPTPT--EKVPIEIDKTTTSSTNTGTYQAARNPQTETKSAEKTKSPTML 327
K +K KP PT E+V +K+ S T AA ++ TK + SPT
Sbjct: 1384 KSPEKTEEKPASPTKKTGEEVKSPKEKSPASPTKKEKSPAAEEVKSPTKKEKSPSSPT-- 1441
Query: 328 KTQQNAIEQKPIT*KRAENKQEKPSKTTHDSA-HKASTTSPELQIQHTKIQEP*KYPNTA 504
+ E P+K T D K+ SP TK ++ + P
Sbjct: 1442 ---------------KKEKSPSSPTKKTGDEVKEKSPPKSP------TKKEKSPEKPEDV 1480
Query: 505 KTPSKK 522
K+P KK
Sbjct: 1481 KSPVKK 1486
>ref|NP_491290.2| UNCoordinated locomotion UNC-89, PHarynx Muscle abnormal PHM-1,
Immunoglobin-like protein (unc-89) [Caenorhabditis
elegans] gi|20198774|gb|AAB54132.2| Uncoordinated protein
89 [Caenorhabditis elegans]
Length = 6632
Score = 41.2 bits (95), Expect = 0.008
Identities = 30/116 (25%), Positives = 52/116 (43%), Gaps = 9/116 (7%)
Frame = +1
Query: 202 EKVPIEIDKTTTSSTNTGTYQAARNPQTETKSAEKTKSPTMLKTQQNAIEQKPIT*KRAE 381
EK P ++D+ S T ++ E E+ KSP + +E+KP + + E
Sbjct: 1529 EKTPEKVDEKPKSPTK-------KDKSPEKSITEEIKSPVKKEKSPEKVEEKPASPTKKE 1581
Query: 382 NKQEKPSKTTHDSAHKAST-----TSPEL----QIQHTKIQEP*KYPNTAKTPSKK 522
EKP+ T S ++ + SPE +++ K + P K + K+P+KK
Sbjct: 1582 KSPEKPASPTKKSENEVKSPTKKEKSPEKSVVEELKSPKEKSPEKADDKPKSPTKK 1637
Score = 41.2 bits (95), Expect = 0.008
Identities = 39/150 (26%), Positives = 58/150 (38%), Gaps = 27/150 (18%)
Frame = +1
Query: 154 KCAKKAHIKPLVPTPTEKVP----IEIDKTTTSSTNTGTYQAARNPQTETKSA------- 300
K +KA KP PT EK P E K+ T + A P++ TK
Sbjct: 1725 KSPEKAEEKPKSPTKKEKSPEKSAAEEVKSPTKKEKSPEKSAEEKPKSPTKKESSPVKMA 1784
Query: 301 -EKTKSPTMLKTQQNAIEQKPIT*KRAE---------------NKQEKPSKTTHDSAHKA 432
++ KSPT + +E+KP + + E K++ PS T + ++
Sbjct: 1785 DDEVKSPTKKEKSPEKVEEKPASPTKKEKTPEKSAAEELKSPTKKEKSPSSPTKKTGDES 1844
Query: 433 STTSPELQIQHTKIQEP*KYPNTAKTPSKK 522
SPE + K P K P +P KK
Sbjct: 1845 KEKSPEKPEEKPKSPTPKKSP--PGSPKKK 1872
Score = 38.9 bits (89), Expect = 0.041
Identities = 30/113 (26%), Positives = 48/113 (41%), Gaps = 1/113 (0%)
Frame = +1
Query: 190 PTPTEKVPIEIDKTTTSSTNTGTYQAARNPQTETKSAEKTKSPTMLKTQQNAIEQKPIT* 369
PT EK P ++++ TS T + K+ ++ KSPT + +E+KP +
Sbjct: 1652 PTKKEKSPEKVEEKPTSPTK-------KESSPTKKTDDEVKSPTKKEKSPQTVEEKPAS- 1703
Query: 370 KRAENKQEKPSKTTHDSAHKASTTSPELQIQHTKIQEP*KYP-NTAKTPSKKA 525
K++ P K+ + SPE K +E K P K+P K A
Sbjct: 1704 --PTKKEKSPEKSVVEEVKSPKEKSPE------KAEEKPKSPTKKEKSPEKSA 1748
Score = 35.4 bits (80), Expect = 0.45
Identities = 35/134 (26%), Positives = 53/134 (39%), Gaps = 20/134 (14%)
Frame = +1
Query: 181 PLVPTPTEKVPIEID------KTTTSSTNTGTYQAARNPQTETKSAEKTKSPTMLKTQQN 342
P PT EK P + K + S+ T ++ +P +T K KSP T++
Sbjct: 1412 PASPTKKEKSPAAEEVKSPTKKEKSPSSPTKKEKSPSSPTKKTGDEVKEKSPPKSPTKKE 1471
Query: 343 AIEQKPIT*KRAENKQEKP---------SKTTHDSAHKASTT-----SPELQIQHTKIQE 480
+KP K K++ P S+TT + TT S E + K +
Sbjct: 1472 KSPEKPEDVKSPVKKEKSPDATNIVEVSSETTIEKTETTMTTEMTHESEESRTSVKKEKT 1531
Query: 481 P*KYPNTAKTPSKK 522
P K K+P+KK
Sbjct: 1532 PEKVDEKPKSPTKK 1545
Score = 34.3 bits (77), Expect = 1.0
Identities = 31/122 (25%), Positives = 47/122 (38%)
Frame = +1
Query: 154 KCAKKAHIKPLVPTPTEKVPIEIDKTTTSSTNTGTYQAARNPQTETKSAEKTKSPTMLKT 333
K +K+ ++ L +P EK P + D S T + E + E KSPT +
Sbjct: 1606 KSPEKSVVEEL-KSPKEKSPEKADDKPKSPTK-------KEKSPEKSATEDVKSPTKKEK 1657
Query: 334 QQNAIEQKPIT*KRAENKQEKPSKTTHDSAHKASTTSPELQIQHTKIQEP*KYPNTAKTP 513
+E+KP + K+ P+K T D + Q K P K K+P
Sbjct: 1658 SPEKVEEKPTS---PTKKESSPTKKTDDEVKSPTKKEKSPQTVEEKPASPTK---KEKSP 1711
Query: 514 SK 519
K
Sbjct: 1712 EK 1713
Score = 31.2 bits (69), Expect = 8.5
Identities = 33/126 (26%), Positives = 47/126 (37%), Gaps = 3/126 (2%)
Frame = +1
Query: 154 KCAKKAHIKPLVPTPT--EKVPIEIDKTTTSSTNTGTYQAARNPQTETKSAEKTKSPTML 327
K +K KP PT E+V +K+ S T AA ++ TK + SPT
Sbjct: 1384 KSPEKTEEKPASPTKKTGEEVKSPKEKSPASPTKKEKSPAAEEVKSPTKKEKSPSSPT-- 1441
Query: 328 KTQQNAIEQKPIT*KRAENKQEKPSKTTHDSA-HKASTTSPELQIQHTKIQEP*KYPNTA 504
+ E P+K T D K+ SP TK ++ + P
Sbjct: 1442 ---------------KKEKSPSSPTKKTGDEVKEKSPPKSP------TKKEKSPEKPEDV 1480
Query: 505 KTPSKK 522
K+P KK
Sbjct: 1481 KSPVKK 1486
>gb|AAO51859.1| similar to Homo sapiens (Human). Mucin 2 precursor (Intestinal
mucin 2) [Dictyostelium discoideum]
Length = 709
Score = 40.4 bits (93), Expect = 0.014
Identities = 32/111 (28%), Positives = 50/111 (44%), Gaps = 2/111 (1%)
Frame = +1
Query: 190 PTPTEK-VPIEIDKTTTSSTNTGTYQAARNPQTETKSAEKTKSPTMLKTQQNAIEQKPI- 363
PTPT+ P T + T T T Q + QT+T + +T PT +TQ Q P
Sbjct: 427 PTPTQTHTPTPTPTQTQTQTQTQT-QTQNSTQTQTPTQTQTPKPTQTQTQTQTPTQTPTQ 485
Query: 364 T*KRAENKQEKPSKTTHDSAHKASTTSPELQIQHTKIQEP*KYPNTAKTPS 516
T + + + + P++T + + T +P T+ Q P P KTP+
Sbjct: 486 TQTQTQTQTQTPTQTQTSTPTQTQTQTP------TQTQTP--KPTQTKTPT 528
Score = 37.0 bits (84), Expect = 0.16
Identities = 29/119 (24%), Positives = 48/119 (39%), Gaps = 3/119 (2%)
Frame = +1
Query: 166 KAHIKPLVPTPTEKVPIEIDKTTTSSTNTGTYQAARNP---QTETKSAEKTKSPTMLKTQ 336
+ H PT T+ + T +ST T T + P QT+T++ T++PT +TQ
Sbjct: 431 QTHTPTPTPTQTQ-TQTQTQTQTQNSTQTQTPTQTQTPKPTQTQTQTQTPTQTPTQTQTQ 489
Query: 337 QNAIEQKPIT*KRAENKQEKPSKTTHDSAHKASTTSPELQIQHTKIQEP*KYPNTAKTP 513
Q P + + P++T + + T P T Q + P +TP
Sbjct: 490 TQTQTQTP-----TQTQTSTPTQTQTQTPTQTQTPKPTQTKTPTPTQTQTQTPTQTQTP 543
Score = 32.3 bits (72), Expect = 3.8
Identities = 26/93 (27%), Positives = 43/93 (45%), Gaps = 7/93 (7%)
Frame = +1
Query: 190 PTPTE-KVPIEIDKTTTSSTNTGTYQAARNP-QTETKSAEKTKSPTMLKTQQNAIEQ--- 354
PT T+ + + T + T+T T + P QT+T +TK+PT +TQ Q
Sbjct: 483 PTQTQTQTQTQTQTPTQTQTSTPTQTQTQTPTQTQTPKPTQTKTPTPTQTQTQTPTQTQT 542
Query: 355 -KPI-T*KRAENKQEKPSKTTHDSAHKASTTSP 447
KPI T + + + P+ T + + T +P
Sbjct: 543 PKPIQTQTQTPTQTQTPTPTQTQTPTQTQTQTP 575
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 490,659,671
Number of Sequences: 1393205
Number of extensions: 11352743
Number of successful extensions: 44857
Number of sequences better than 10.0: 336
Number of HSP's better than 10.0 without gapping: 39498
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43919
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 18750593680
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
