Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004706A_C01 KMC004706A_c01
(700 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAF70509.1| beta-ketoacyl-acyl carrier protein synthase III [... 196 2e-49
emb|CAC08184.1| beta-ketoacyl-acyl carrier protein synthase III ... 191 6e-48
ref|NP_176452.1| 3-ketoacyl-acyl carrier protein synthase III (K... 186 4e-46
gb|AAF19534.1|AC007190_2 F23N19.2 [Arabidopsis thaliana] 186 4e-46
gb|AAD43621.1|AC005698_20 T3P18.20 [Arabidopsis thaliana] 186 4e-46
>gb|AAF70509.1| beta-ketoacyl-acyl carrier protein synthase III [Glycine max]
Length = 397
Score = 196 bits (499), Expect = 2e-49
Identities = 100/105 (95%), Positives = 102/105 (96%)
Frame = -3
Query: 698 RFAVKYVPQSIEYALEKAGLPASSIDWLLLHQANQRIIDAVATRLELPSERVISNLANYG 519
RFAV+ VPQSIE ALEKAGLPASSIDWLLLHQANQRIIDAVATRLELPSERVISNLANYG
Sbjct: 293 RFAVRCVPQSIESALEKAGLPASSIDWLLLHQANQRIIDAVATRLELPSERVISNLANYG 352
Query: 518 NTSAASIPLALDEAVRSGKVKPGQTIATAGFGAGLTWGSAIVRWG 384
NTSAASIPLALDEAVRSGKVK GQTIATAGFGAGLTWGSAI+RWG
Sbjct: 353 NTSAASIPLALDEAVRSGKVKAGQTIATAGFGAGLTWGSAIIRWG 397
>emb|CAC08184.1| beta-ketoacyl-acyl carrier protein synthase III [Pisum sativum]
Length = 397
Score = 191 bits (486), Expect = 6e-48
Identities = 97/105 (92%), Positives = 101/105 (95%)
Frame = -3
Query: 698 RFAVKYVPQSIEYALEKAGLPASSIDWLLLHQANQRIIDAVATRLELPSERVISNLANYG 519
RFAV+ VPQ+IE AL+KAGLPASSIDWLLLHQANQRIIDAVATRLE+PSERVISNLANYG
Sbjct: 293 RFAVRCVPQTIESALKKAGLPASSIDWLLLHQANQRIIDAVATRLEIPSERVISNLANYG 352
Query: 518 NTSAASIPLALDEAVRSGKVKPGQTIATAGFGAGLTWGSAIVRWG 384
NTSAASIPLALDEAVRSGKVK GQTIA AGFGAGLTWGSAIVRWG
Sbjct: 353 NTSAASIPLALDEAVRSGKVKAGQTIAAAGFGAGLTWGSAIVRWG 397
>ref|NP_176452.1| 3-ketoacyl-acyl carrier protein synthase III (KAS III); protein id:
At1g62640.1, supported by cDNA: gi_17380659, supported
by cDNA: gi_20258996, supported by cDNA: gi_598074
[Arabidopsis thaliana] gi|27735183|sp|P49243|FABH_ARATH
3-oxoacyl-[acyl-carrier-protein] synthase III,
chloroplast precursor (Beta-ketoacyl-ACP synthase III)
(KAS III) gi|1888359|emb|CAA72385.1| 3-ketoacyl-acyl
carrier protein synthase III [Arabidopsis thaliana]
gi|17380660|gb|AAL36160.1| putative 3-ketoacyl-acyl
carrier protein synthase III (KAS III) [Arabidopsis
thaliana] gi|20258997|gb|AAM14214.1| putative
3-ketoacyl-acyl carrier protein synthase III (KAS III)
[Arabidopsis thaliana]
Length = 404
Score = 186 bits (471), Expect = 4e-46
Identities = 93/104 (89%), Positives = 98/104 (93%)
Frame = -3
Query: 698 RFAVKYVPQSIEYALEKAGLPASSIDWLLLHQANQRIIDAVATRLELPSERVISNLANYG 519
RFAVK VPQSIE AL+KAGLPAS+IDWLLLHQANQRIID+VATRL P ERVISNLANYG
Sbjct: 300 RFAVKCVPQSIESALQKAGLPASAIDWLLLHQANQRIIDSVATRLHFPPERVISNLANYG 359
Query: 518 NTSAASIPLALDEAVRSGKVKPGQTIATAGFGAGLTWGSAIVRW 387
NTSAASIPLALDEAVRSGKVKPG TIAT+GFGAGLTWGSAI+RW
Sbjct: 360 NTSAASIPLALDEAVRSGKVKPGHTIATSGFGAGLTWGSAIMRW 403
>gb|AAF19534.1|AC007190_2 F23N19.2 [Arabidopsis thaliana]
Length = 495
Score = 186 bits (471), Expect = 4e-46
Identities = 93/104 (89%), Positives = 98/104 (93%)
Frame = -3
Query: 698 RFAVKYVPQSIEYALEKAGLPASSIDWLLLHQANQRIIDAVATRLELPSERVISNLANYG 519
RFAVK VPQSIE AL+KAGLPAS+IDWLLLHQANQRIID+VATRL P ERVISNLANYG
Sbjct: 314 RFAVKCVPQSIESALQKAGLPASAIDWLLLHQANQRIIDSVATRLHFPPERVISNLANYG 373
Query: 518 NTSAASIPLALDEAVRSGKVKPGQTIATAGFGAGLTWGSAIVRW 387
NTSAASIPLALDEAVRSGKVKPG TIAT+GFGAGLTWGSAI+RW
Sbjct: 374 NTSAASIPLALDEAVRSGKVKPGHTIATSGFGAGLTWGSAIMRW 417
>gb|AAD43621.1|AC005698_20 T3P18.20 [Arabidopsis thaliana]
Length = 435
Score = 186 bits (471), Expect = 4e-46
Identities = 93/104 (89%), Positives = 98/104 (93%)
Frame = -3
Query: 698 RFAVKYVPQSIEYALEKAGLPASSIDWLLLHQANQRIIDAVATRLELPSERVISNLANYG 519
RFAVK VPQSIE AL+KAGLPAS+IDWLLLHQANQRIID+VATRL P ERVISNLANYG
Sbjct: 331 RFAVKCVPQSIESALQKAGLPASAIDWLLLHQANQRIIDSVATRLHFPPERVISNLANYG 390
Query: 518 NTSAASIPLALDEAVRSGKVKPGQTIATAGFGAGLTWGSAIVRW 387
NTSAASIPLALDEAVRSGKVKPG TIAT+GFGAGLTWGSAI+RW
Sbjct: 391 NTSAASIPLALDEAVRSGKVKPGHTIATSGFGAGLTWGSAIMRW 434
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 587,510,181
Number of Sequences: 1393205
Number of extensions: 12740972
Number of successful extensions: 34060
Number of sequences better than 10.0: 627
Number of HSP's better than 10.0 without gapping: 32204
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33883
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 31967457276
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
