>KMC004703A_C01 KMC004703A_c01
gtttgcactaaatgacagaacgattAGTCAAAGAGATAGTCAAGTTCCAAAGTGCGAAAA
ACTTAACTAATTTATGTGCTAACTGTTCTCCCAAGGATCTACACATGCAGCTCCTTATGT
GCATTACATATACACACACACTCAGACGAAAGATGGGGATCTAACTAGCAACTGTCGGAG
AAAATAAATTACTCAAGTGCCGGAGTGCAACCGTACAAAACGTAAGGAATCAAAGGGAGT
GCTTAAACGCCATTCTCTTTGCTTTTTATTCAGTGGTCTTCCTTTCCCTGCTTTCTCTCT
GTTAACTCTCACGTCTGCTAAACTCCAGGTGCAATATTTTGTATCCAAGTCAAAGGATTC
AAGCTTGAACACACCATCACCTTCTGCAGATGGATTCATGGAATCATCATCATCTATGGC
ATATCTCACATACATAGATCTGTCCTTGAATCGGTCTAGGTCATCTGGAATCCGAACTAC
TCTTTCCACACCAGGAGAAGACACCTCCAAAGTTAAATTCTCCGGAACAGATTTGGTAAG
TTCTGCTTCATCCAATTTTGCTCTATAGGTTGTAGAAAAGGCTTCAATATCTTCTATGTT
GGGG

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC004703A_C01 KMC004703A_c01
         (604 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

emb|CAD40825.1| OSJNBa0006B20.16 [Oryza sativa (japonica cultiva...   189  3e-47
ref|NP_564954.1| expressed protein; protein id: At1g69210.1, sup...   123  2e-27
gb|AAF27066.1|AC008262_15 F4N2.17 [Arabidopsis thaliana]              110  1e-23
dbj|BAB91816.1| B1103C09.6 [Oryza sativa (japonica cultivar-grou...    58  8e-08
ref|NP_711122.1| conserved hypothetical protein [Leptospira inte...    39  0.040

>emb|CAD40825.1| OSJNBa0006B20.16 [Oryza sativa (japonica cultivar-group)]
          Length = 242

 Score =  189 bits (479), Expect = 3e-47
 Identities = 88/136 (64%), Positives = 113/136 (82%), Gaps = 2/136 (1%)
 Frame = -2

Query: 603 PNIEDIEAFSTTYRAKLDEAELTKSVPENLTLEVSSPGVERVVRIPDDLDRFKDRSMYVR 424
           P I+DIEAF+  YRAK+D+AE    +P+N++LEVSSPGVERV+RIPDDL+RFK+R+MYVR
Sbjct: 106 PTIDDIEAFTIAYRAKIDDAESAGRIPQNISLEVSSPGVERVIRIPDDLERFKERAMYVR 165

Query: 423 YAIDDD--DSMNPSAEGDGVFKLESFDLDTKYCTWSLADVRVNREKAGKGRPLNKKQREW 250
           Y I  D  + M P  EGDGVF+L S+D+D   CTW +ADV++NR++AGKGRPL+KKQREW
Sbjct: 166 YTITSDGGEGMTPQ-EGDGVFRLISYDMDLCECTWGIADVKINRQQAGKGRPLSKKQREW 224

Query: 249 RLSTPFDSLRFVRLHS 202
           RL TPF+SL+ VR+HS
Sbjct: 225 RLQTPFESLKLVRVHS 240

>ref|NP_564954.1| expressed protein; protein id: At1g69210.1, supported by cDNA:
           gi_13937140 [Arabidopsis thaliana]
           gi|13937141|gb|AAK50064.1|AF372924_1 At1g69210/F4N2_11
           [Arabidopsis thaliana] gi|22137004|gb|AAM91347.1|
           At1g69210/F4N2_11 [Arabidopsis thaliana]
          Length = 305

 Score =  123 bits (309), Expect = 2e-27
 Identities = 59/133 (44%), Positives = 89/133 (66%)
 Frame = -2

Query: 603 PNIEDIEAFSTTYRAKLDEAELTKSVPENLTLEVSSPGVERVVRIPDDLDRFKDRSMYVR 424
           P ++++E FS  ++ +LD+A   K +PE+L LEVSSPG ER++R+P+DL RFKD  M V 
Sbjct: 174 PTMDELEEFSREFKKRLDDAGAEKVIPEDLALEVSSPGAERLLRVPEDLPRFKDMPMTVS 233

Query: 423 YAIDDDDSMNPSAEGDGVFKLESFDLDTKYCTWSLADVRVNREKAGKGRPLNKKQREWRL 244
           Y    +++ +  A   GVF LES D ++  C W LADVR NR+   KGRPL++KQ++ R+
Sbjct: 234 YV---EETNSRKAVKSGVFLLESIDAESDNCVWKLADVRENRDPESKGRPLSRKQKDLRI 290

Query: 243 STPFDSLRFVRLH 205
           + PF   + + L+
Sbjct: 291 TLPFADHKKINLY 303

>gb|AAF27066.1|AC008262_15 F4N2.17 [Arabidopsis thaliana]
          Length = 1120

 Score =  110 bits (275), Expect = 1e-23
 Identities = 57/142 (40%), Positives = 87/142 (61%), Gaps = 9/142 (6%)
 Frame = -2

Query: 603  PNIEDIEAFSTTYRAKLDEAELTKSVPENLTLEVS---------SPGVERVVRIPDDLDR 451
            P ++++E FS  ++ +LD+A   K +PE+L LEV          S G ER++R+P+DL R
Sbjct: 980  PTMDELEEFSREFKKRLDDAGAEKVIPEDLALEVKKSLSPVNQLSLGAERLLRVPEDLPR 1039

Query: 450  FKDRSMYVRYAIDDDDSMNPSAEGDGVFKLESFDLDTKYCTWSLADVRVNREKAGKGRPL 271
            FKD  M V Y    +++ +  A   GVF LES D ++  C W LADVR NR+   KGRPL
Sbjct: 1040 FKDMPMTVSYV---EETNSRKAVKSGVFLLESIDAESDNCVWKLADVRENRDPESKGRPL 1096

Query: 270  NKKQREWRLSTPFDSLRFVRLH 205
            ++KQ++ R++ PF   + + L+
Sbjct: 1097 SRKQKDLRITLPFADHKKINLY 1118

>dbj|BAB91816.1| B1103C09.6 [Oryza sativa (japonica cultivar-group)]
           gi|20804622|dbj|BAB92312.1| P0451D05.14 [Oryza sativa
           (japonica cultivar-group)]
          Length = 165

 Score = 58.2 bits (139), Expect = 8e-08
 Identities = 26/63 (41%), Positives = 43/63 (67%), Gaps = 1/63 (1%)
 Frame = -2

Query: 516 LTLEVSSPGVERVVRIPDDLDRFKDRSMYVRYAIDDDD-SMNPSAEGDGVFKLESFDLDT 340
           L+  VSSPG ER++ +P+DLDRFKD ++ V+Y ++ DD  +      +G+F L+S D+  
Sbjct: 70  LSQAVSSPGAERLLEVPEDLDRFKDMAIRVQYLVEGDDLVLKQILRKNGIFLLKSVDIQA 129

Query: 339 KYC 331
           ++C
Sbjct: 130 EHC 132

>ref|NP_711122.1| conserved hypothetical protein [Leptospira interrogans serovar lai
           str. 56601] gi|24194443|gb|AAN48140.1|AE011278_1
           conserved hypothetical protein [Leptospira interrogans
           serovar lai str. 56601]
          Length = 162

 Score = 39.3 bits (90), Expect = 0.040
 Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
 Frame = -2

Query: 558 KLDEAELTKSVPE-NLTLEVSSPGVERVVRIPDDLDRFKDRSMYVRYAIDDDDSMNPSAE 382
           KL E EL +  P+ + TL+VSS G ER + +P DLDRF  R + +R     ++S     E
Sbjct: 61  KLKE-ELERISPDLDYTLKVSSAGAERKLNLPGDLDRF--RGIPIRLVFRSEES---EKE 114

Query: 381 GDGVFKLESFDLD 343
            +G+F++ + D D
Sbjct: 115 QEGIFRVVNRDGD 127

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 504,489,144
Number of Sequences: 1393205
Number of extensions: 10728156
Number of successful extensions: 28938
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 27547
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28858
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 23711793746
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

EST assemble image

clone accession position 1 MPD040b11_f AV772716 1 517 2 MR082c03_f BP082293 26 407 3 MF050a11_f BP030908 47 607

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