Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004696A_C01 KMC004696A_c01
(578 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAK54282.1|AF081955_1 fatty acid 9-hydroperoxide lyase [Cucum... 203 1e-51
gb|AAN37417.1| allene oxide synthase [Solanum tuberosum] 202 2e-51
gb|AAO72741.1| allene oxide synthase [Citrus sinensis] 202 3e-51
gb|AAF64041.1|AF229811_1 fatty acid hydroperoxide lyase [Cucumis... 199 2e-50
emb|CAD29735.1| allene oxide synthase [Solanum tuberosum] 199 2e-50
>gb|AAK54282.1|AF081955_1 fatty acid 9-hydroperoxide lyase [Cucumis melo]
Length = 481
Score = 203 bits (516), Expect = 1e-51
Identities = 99/150 (66%), Positives = 120/150 (80%), Gaps = 1/150 (0%)
Frame = -2
Query: 577 KMSLLKSVVYEVLRIEPTVPYQYAKAREDLVIHSHDASFEVKKGEMLFGFQPFATKDPRI 398
KMSLLKSVVYE LRIEP VP+QY KA+ED+VI SHD+SF++KKGE +FG+QPFATKDP+I
Sbjct: 331 KMSLLKSVVYEALRIEPPVPFQYGKAKEDIVIQSHDSSFKIKKGETIFGYQPFATKDPKI 390
Query: 397 FDDPEEFLPRRFEG-EGEKLLKHVLWGNGKETEEPSPGNKQCAGRNLVVLMCRLFLVEFF 221
F D E+F+ RF G EGEKLLK+V W N +ET EP+P NKQC G+NLVVL+ R+ +VEFF
Sbjct: 391 FKDSEKFVGDRFVGEEGEKLLKYVYWSNERETVEPTPENKQCPGKNLVVLIGRIMVVEFF 450
Query: 220 LRYDTFEFEFKSSAFGPAVTIKSLTKASTL 131
LRYDTF E GPAV KSLT+A+ +
Sbjct: 451 LRYDTFTVEVADLPLGPAVKFKSLTRATDM 480
>gb|AAN37417.1| allene oxide synthase [Solanum tuberosum]
Length = 507
Score = 202 bits (514), Expect = 2e-51
Identities = 99/147 (67%), Positives = 117/147 (79%), Gaps = 1/147 (0%)
Frame = -2
Query: 577 KMSLLKSVVYEVLRIEPTVPYQYAKAREDLVIHSHDASFEVKKGEMLFGFQPFATKDPRI 398
KM L+KSVVYE LR++P V QY +A++DL I SHDA FEVKKGEMLFG+QPFATKDP+I
Sbjct: 361 KMPLMKSVVYEALRVDPPVASQYGRAKQDLKIESHDAVFEVKKGEMLFGYQPFATKDPKI 420
Query: 397 FDDPEEFLPRRFEG-EGEKLLKHVLWGNGKETEEPSPGNKQCAGRNLVVLMCRLFLVEFF 221
FD PEEF+ RF G EGEKLLK+VLW NG ETE P+ GNKQCAGR+ VV++ RLF+ EFF
Sbjct: 421 FDRPEEFVADRFVGEEGEKLLKYVLWSNGPETESPTVGNKQCAGRDFVVMVSRLFVTEFF 480
Query: 220 LRYDTFEFEFKSSAFGPAVTIKSLTKA 140
LRYDTF + SA G ++TI SL KA
Sbjct: 481 LRYDTFNVDVDKSALGASITITSLKKA 507
>gb|AAO72741.1| allene oxide synthase [Citrus sinensis]
Length = 532
Score = 202 bits (513), Expect = 3e-51
Identities = 97/147 (65%), Positives = 117/147 (78%)
Frame = -2
Query: 577 KMSLLKSVVYEVLRIEPTVPYQYAKAREDLVIHSHDASFEVKKGEMLFGFQPFATKDPRI 398
+M L+KSVVYEVLR+EP V QY KA+ DL+I SH+ASFEVK+GEMLFG+QPFATKDP+I
Sbjct: 385 QMPLMKSVVYEVLRMEPPVALQYGKAKRDLIISSHEASFEVKEGEMLFGYQPFATKDPKI 444
Query: 397 FDDPEEFLPRRFEGEGEKLLKHVLWGNGKETEEPSPGNKQCAGRNLVVLMCRLFLVEFFL 218
F+ EEF+ RF GEGEK+LKHVLW NG ETE P GNKQCAG++ VVL RL LVE FL
Sbjct: 445 FEQAEEFVADRFVGEGEKMLKHVLWSNGPETENPPVGNKQCAGKDFVVLASRLLLVELFL 504
Query: 217 RYDTFEFEFKSSAFGPAVTIKSLTKAS 137
RYD+F+ + SA G +VT+ SL +AS
Sbjct: 505 RYDSFDIQVGKSAIGSSVTLTSLKRAS 531
>gb|AAF64041.1|AF229811_1 fatty acid hydroperoxide lyase [Cucumis sativus]
Length = 478
Score = 199 bits (506), Expect = 2e-50
Identities = 97/148 (65%), Positives = 118/148 (79%), Gaps = 1/148 (0%)
Frame = -2
Query: 577 KMSLLKSVVYEVLRIEPTVPYQYAKAREDLVIHSHDASFEVKKGEMLFGFQPFATKDPRI 398
KMSLLKSVVYE LRIEP VP+QY KA+ED+VI SHD+ F++KKGE +FG+QPFATKDP+I
Sbjct: 328 KMSLLKSVVYEALRIEPPVPFQYGKAKEDIVIQSHDSCFKIKKGETIFGYQPFATKDPKI 387
Query: 397 FDDPEEFLPRRFEG-EGEKLLKHVLWGNGKETEEPSPGNKQCAGRNLVVLMCRLFLVEFF 221
F D E+F+ RF G EGEKLLK+V W N +ET EP+ NKQC G+NLVV+M R+ +VEFF
Sbjct: 388 FKDSEKFVGDRFVGEEGEKLLKYVYWSNERETVEPTAENKQCPGKNLVVMMGRIIVVEFF 447
Query: 220 LRYDTFEFEFKSSAFGPAVTIKSLTKAS 137
LRYDTF + A GPAV KSLT+A+
Sbjct: 448 LRYDTFTVDVADLALGPAVKFKSLTRAT 475
>emb|CAD29735.1| allene oxide synthase [Solanum tuberosum]
Length = 530
Score = 199 bits (506), Expect = 2e-50
Identities = 99/148 (66%), Positives = 117/148 (78%), Gaps = 1/148 (0%)
Frame = -2
Query: 577 KMSLLKSVVYEVLRIEPTVPYQYAKAREDLVIHSHDASFEVKKGEMLFGFQPFATKDPRI 398
KM L+KSVVYE LRIEP V QY +A+ D+VI SHDASFE+K+GE+L+GFQPFATKDP+I
Sbjct: 382 KMPLMKSVVYESLRIEPPVASQYGRAKHDMVIESHDASFEIKEGELLYGFQPFATKDPKI 441
Query: 397 FDDPEEFLPRRFEG-EGEKLLKHVLWGNGKETEEPSPGNKQCAGRNLVVLMCRLFLVEFF 221
FD EEF+ RF G EGEKLLKHVLW NG ETE PS NKQCAG++ VVL+ RL LVE F
Sbjct: 442 FDRSEEFVADRFIGEEGEKLLKHVLWSNGSETENPSINNKQCAGKDFVVLVSRLLLVELF 501
Query: 220 LRYDTFEFEFKSSAFGPAVTIKSLTKAS 137
LRYD+FE E +S G A+T+ SL +AS
Sbjct: 502 LRYDSFEIEVGASPLGAAITLTSLRRAS 529
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 479,456,660
Number of Sequences: 1393205
Number of extensions: 10781947
Number of successful extensions: 42808
Number of sequences better than 10.0: 1141
Number of HSP's better than 10.0 without gapping: 39775
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42395
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 21426319650
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
