Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004695A_C01 KMC004695A_c01
(514 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAL36326.1| putative arginine methyltransferase pam1 [Arabido... 164 4e-40
ref|NP_194680.1| arginine methyltransferase (pam1); protein id: ... 164 4e-40
ref|NP_179557.1| putative arginine N-methyltransferase; protein ... 159 1e-38
pir||T52248 protein-arginine N-methyltransferase (EC 2.1.1.23) [... 144 8e-34
gb|AAO32061.1| putative arginine methyltransferase [Brassica rap... 119 2e-26
>gb|AAL36326.1| putative arginine methyltransferase pam1 [Arabidopsis thaliana]
Length = 390
Score = 164 bits (416), Expect = 4e-40
Identities = 69/94 (73%), Positives = 85/94 (90%)
Frame = -3
Query: 512 DDFIHALLAYFDVTFTMCHKLMGFSTGPRSRGTHWKQTVLYLEDILTVCEGEAIVGSLTV 333
+D+IHAL+AYFDV+FTMCHKL+GFSTGP+SR THWKQTVLYLED+LT+CEGE I G+++V
Sbjct: 297 NDYIHALVAYFDVSFTMCHKLLGFSTGPKSRATHWKQTVLYLEDVLTICEGETITGTMSV 356
Query: 332 APNKKNPRDVDIMLKYSFNGKRCNVSKVQHYKMR 231
+PNKKNPRD+DI L YS NG+ C +S+ QHYKMR
Sbjct: 357 SPNKKNPRDIDIKLSYSLNGQHCKISRTQHYKMR 390
>ref|NP_194680.1| arginine methyltransferase (pam1); protein id: At4g29510.1,
supported by cDNA: 38601., supported by cDNA:
gi_17381027 [Arabidopsis thaliana]
gi|7488282|pir||T09914 protein-arginine
N-methyltransferase (EC 2.1.1.23) - Arabidopsis thaliana
gi|5123545|emb|CAB45311.1| arginine methyltransferase
(pam1) [Arabidopsis thaliana] gi|7269850|emb|CAB79709.1|
arginine methyltransferase (pam1) [Arabidopsis thaliana]
gi|21593404|gb|AAM65371.1| arginine methyltransferase
pam1 [Arabidopsis thaliana] gi|23297369|gb|AAN12952.1|
arginine methyltransferase pam1 [Arabidopsis thaliana]
Length = 390
Score = 164 bits (416), Expect = 4e-40
Identities = 69/94 (73%), Positives = 85/94 (90%)
Frame = -3
Query: 512 DDFIHALLAYFDVTFTMCHKLMGFSTGPRSRGTHWKQTVLYLEDILTVCEGEAIVGSLTV 333
+D+IHAL+AYFDV+FTMCHKL+GFSTGP+SR THWKQTVLYLED+LT+CEGE I G+++V
Sbjct: 297 NDYIHALVAYFDVSFTMCHKLLGFSTGPKSRATHWKQTVLYLEDVLTICEGETITGTMSV 356
Query: 332 APNKKNPRDVDIMLKYSFNGKRCNVSKVQHYKMR 231
+PNKKNPRD+DI L YS NG+ C +S+ QHYKMR
Sbjct: 357 SPNKKNPRDIDIKLSYSLNGQHCKISRTQHYKMR 390
>ref|NP_179557.1| putative arginine N-methyltransferase; protein id: At2g19670.1
[Arabidopsis thaliana] gi|25411923|pir||F84579 probable
arginine N-methyltransferase [imported] - Arabidopsis
thaliana gi|3687250|gb|AAC62148.1| putative arginine
N-methyltransferase [Arabidopsis thaliana]
Length = 366
Score = 159 bits (403), Expect = 1e-38
Identities = 70/94 (74%), Positives = 81/94 (85%)
Frame = -3
Query: 512 DDFIHALLAYFDVTFTMCHKLMGFSTGPRSRGTHWKQTVLYLEDILTVCEGEAIVGSLTV 333
+D IHAL+AYFDV+FTMCHK MGFSTGP+SR THWKQTVLYLED+LT+CEGE I GS+T+
Sbjct: 273 NDHIHALVAYFDVSFTMCHKKMGFSTGPKSRATHWKQTVLYLEDVLTICEGETITGSMTI 332
Query: 332 APNKKNPRDVDIMLKYSFNGKRCNVSKVQHYKMR 231
A NKKNPRDVDI L YS NG+ CN+S+ YKMR
Sbjct: 333 AQNKKNPRDVDIKLSYSLNGQHCNISRTHFYKMR 366
>pir||T52248 protein-arginine N-methyltransferase (EC 2.1.1.23) [imported] -
Arabidopsis thaliana (fragment)
gi|3292849|emb|CAA07570.1| arginine methyltransferase
[Arabidopsis thaliana]
Length = 376
Score = 144 bits (362), Expect = 8e-34
Identities = 61/80 (76%), Positives = 74/80 (92%)
Frame = -3
Query: 512 DDFIHALLAYFDVTFTMCHKLMGFSTGPRSRGTHWKQTVLYLEDILTVCEGEAIVGSLTV 333
+D+IHAL+AYFDV+FTMCHKL+GFSTGP+SR THWKQTVLYLED+LT+CEGE I G+++V
Sbjct: 297 NDYIHALVAYFDVSFTMCHKLLGFSTGPKSRATHWKQTVLYLEDVLTICEGETITGTMSV 356
Query: 332 APNKKNPRDVDIMLKYSFNG 273
+PNKKNPRD+DI L YS NG
Sbjct: 357 SPNKKNPRDIDIKLSYSLNG 376
>gb|AAO32061.1| putative arginine methyltransferase [Brassica rapa subsp.
pekinensis]
Length = 204
Score = 119 bits (299), Expect = 2e-26
Identities = 51/66 (77%), Positives = 62/66 (93%)
Frame = -3
Query: 512 DDFIHALLAYFDVTFTMCHKLMGFSTGPRSRGTHWKQTVLYLEDILTVCEGEAIVGSLTV 333
+D+IHAL+AYFDV+FTMCHKL+GFSTGPRSR THWKQTV+YLED+LT+CEGE I GS++V
Sbjct: 139 NDYIHALVAYFDVSFTMCHKLLGFSTGPRSRATHWKQTVMYLEDVLTICEGETITGSMSV 198
Query: 332 APNKKN 315
+ NKKN
Sbjct: 199 SYNKKN 204
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 415,103,327
Number of Sequences: 1393205
Number of extensions: 8348261
Number of successful extensions: 19062
Number of sequences better than 10.0: 98
Number of HSP's better than 10.0 without gapping: 18654
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19052
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 16232377112
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
