Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004689A_C01 KMC004689A_c01
(455 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD31511.1| histidine-rich protein II [Plasmodium falciparum] 40 0.015
sp|P05227|HRP1_PLAFA HISTIDINE-RICH PROTEIN PRECURSOR (CLONE PFH... 39 0.019
pir||A25942 histidine/alanine-rich protein II - malaria parasite... 39 0.019
emb|CAA49544.1| HRPII [Plasmodium falciparum] 39 0.032
pir||S31773 HRPII protein - malaria parasite (Plasmodium falcipa... 38 0.042
>gb|AAD31511.1| histidine-rich protein II [Plasmodium falciparum]
Length = 339
Score = 39.7 bits (91), Expect = 0.015
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = +3
Query: 333 HLPIVNHAADNHHAADNYHAVDNHHLY 413
H V+HAAD HHAAD +HA D HH +
Sbjct: 275 HATDVHHAADAHHAADAHHATDAHHAH 301
Score = 37.7 bits (86), Expect = 0.055
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +3
Query: 333 HLPIVNHAADNHHAADNYHAVDNHH 407
H +HAAD HHAAD +HA D HH
Sbjct: 245 HATDAHHAADAHHAADAHHATDAHH 269
Score = 37.0 bits (84), Expect = 0.095
Identities = 14/22 (63%), Positives = 17/22 (76%)
Frame = +3
Query: 348 NHAADNHHAADNYHAVDNHHLY 413
+HAAD HHAAD +HA D HH +
Sbjct: 205 HHAADAHHAADAHHATDAHHAH 226
Score = 36.2 bits (82), Expect = 0.16
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +3
Query: 333 HLPIVNHAADNHHAADNYHAVDNHH 407
H +HA D HHAAD +HA D HH
Sbjct: 227 HAADAHHATDAHHAADAHHATDAHH 251
Score = 36.2 bits (82), Expect = 0.16
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +3
Query: 333 HLPIVNHAADNHHAADNYHAVDNHH 407
H +HAAD HHA D +HA D HH
Sbjct: 251 HAADAHHAADAHHATDAHHAADAHH 275
Score = 36.2 bits (82), Expect = 0.16
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +3
Query: 333 HLPIVNHAADNHHAADNYHAVDNHH 407
H +HA D HHAAD +HA D HH
Sbjct: 239 HAADAHHATDAHHAADAHHAADAHH 263
Score = 36.2 bits (82), Expect = 0.16
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +3
Query: 333 HLPIVNHAADNHHAADNYHAVDNHH 407
H +HAAD HHA D +HA D HH
Sbjct: 233 HATDAHHAADAHHATDAHHAADAHH 257
Score = 35.8 bits (81), Expect = 0.21
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +3
Query: 333 HLPIVNHAADNHHAADNYHAVDNHH 407
H +HA D HHAAD +HA D HH
Sbjct: 269 HAADAHHATDVHHAADAHHAADAHH 293
Score = 35.8 bits (81), Expect = 0.21
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +3
Query: 333 HLPIVNHAADNHHAADNYHAVDNHH 407
H +HAAD HHA D +HA D HH
Sbjct: 263 HATDAHHAADAHHATDVHHAADAHH 287
Score = 35.8 bits (81), Expect = 0.21
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +3
Query: 333 HLPIVNHAADNHHAADNYHAVDNHH 407
H +HA D HHAAD +HA D HH
Sbjct: 257 HAADAHHATDAHHAADAHHATDVHH 281
Score = 35.0 bits (79), Expect = 0.36
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +3
Query: 348 NHAADNHHAADNYHAVDNHH 407
+HAAD HHA D +HA D HH
Sbjct: 226 HHAADAHHATDAHHAADAHH 245
Score = 32.3 bits (72), Expect = 2.3
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 348 NHAADNHHAADNYHAVDNHHLY 413
+HA+D HHAAD +HA HH +
Sbjct: 154 HHASDAHHAADAHHAAYAHHAH 175
Score = 31.2 bits (69), Expect = 5.2
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
Frame = +3
Query: 327 LQHLPIVNHAADNHHAAD---NYHAVDNHH 407
+ H +HAAD HHA D +HA D HH
Sbjct: 279 VHHAADAHHAADAHHATDAHHAHHAADAHH 308
Score = 30.8 bits (68), Expect = 6.8
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +3
Query: 348 NHAADNHHAADNYHAVDNHHLY 413
+HA+D HHA D +HA HH +
Sbjct: 184 HHASDAHHAGDAHHAAYAHHAH 205
Score = 30.8 bits (68), Expect = 6.8
Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 3/28 (10%)
Frame = +3
Query: 333 HLPIVNHAADNHHAAD---NYHAVDNHH 407
H +HAAD HHA D +HA D HH
Sbjct: 206 HAADAHHAADAHHATDAHHAHHAADAHH 233
>sp|P05227|HRP1_PLAFA HISTIDINE-RICH PROTEIN PRECURSOR (CLONE PFHRP-II)
gi|160336|gb|AAA51639.1| histidine-rich protein
[Plasmodium falciparum]
Length = 332
Score = 39.3 bits (90), Expect = 0.019
Identities = 15/27 (55%), Positives = 19/27 (69%)
Frame = +3
Query: 333 HLPIVNHAADNHHAADNYHAVDNHHLY 413
H +HAAD HHAAD +HA D+HH +
Sbjct: 263 HATDAHHAADAHHAADAHHATDSHHAH 289
Score = 37.7 bits (86), Expect = 0.055
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +3
Query: 333 HLPIVNHAADNHHAADNYHAVDNHH 407
H +HAAD HHAAD +HA D HH
Sbjct: 233 HATDAHHAADAHHAADAHHATDAHH 257
Score = 37.0 bits (84), Expect = 0.095
Identities = 14/22 (63%), Positives = 17/22 (76%)
Frame = +3
Query: 348 NHAADNHHAADNYHAVDNHHLY 413
+HAAD HHAAD +HA D HH +
Sbjct: 205 HHAADAHHAADAHHATDAHHAH 226
Score = 36.2 bits (82), Expect = 0.16
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +3
Query: 333 HLPIVNHAADNHHAADNYHAVDNHH 407
H +HAAD HHA D +HA D HH
Sbjct: 251 HATDAHHAADAHHATDAHHAADAHH 275
Score = 36.2 bits (82), Expect = 0.16
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +3
Query: 333 HLPIVNHAADNHHAADNYHAVDNHH 407
H +HA D HHAAD +HA D HH
Sbjct: 245 HAADAHHATDAHHAADAHHATDAHH 269
Score = 36.2 bits (82), Expect = 0.16
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +3
Query: 333 HLPIVNHAADNHHAADNYHAVDNHH 407
H +HA D HHAAD +HA D HH
Sbjct: 257 HAADAHHATDAHHAADAHHAADAHH 281
Score = 36.2 bits (82), Expect = 0.16
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +3
Query: 333 HLPIVNHAADNHHAADNYHAVDNHH 407
H +HAAD HHA D +HA D HH
Sbjct: 239 HAADAHHAADAHHATDAHHAADAHH 263
Score = 36.2 bits (82), Expect = 0.16
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +3
Query: 333 HLPIVNHAADNHHAADNYHAVDNHH 407
H +HA D HHAAD +HA D HH
Sbjct: 227 HAADAHHATDAHHAADAHHAADAHH 251
Score = 35.0 bits (79), Expect = 0.36
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +3
Query: 348 NHAADNHHAADNYHAVDNHH 407
+HAAD HHA D +HA D HH
Sbjct: 226 HHAADAHHATDAHHAADAHH 245
Score = 33.5 bits (75), Expect = 1.0
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +3
Query: 348 NHAADNHHAADNYHAVDNHHLY 413
+HAAD HHAAD +HA HH +
Sbjct: 184 HHAADAHHAADAHHAAYAHHAH 205
Score = 32.3 bits (72), Expect = 2.3
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 348 NHAADNHHAADNYHAVDNHHLY 413
+HA+D HHAAD +HA HH +
Sbjct: 163 HHASDAHHAADAHHAAYAHHAH 184
Score = 30.8 bits (68), Expect = 6.8
Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 3/28 (10%)
Frame = +3
Query: 333 HLPIVNHAADNHHAAD---NYHAVDNHH 407
H +HAAD HHA D +HA D HH
Sbjct: 206 HAADAHHAADAHHATDAHHAHHAADAHH 233
Score = 30.4 bits (67), Expect = 8.8
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 348 NHAADNHHAADNYHAVDNHHLY 413
+H AD HHA +HA D HH +
Sbjct: 61 HHVADAHHAHHAHHAADAHHAH 82
>pir||A25942 histidine/alanine-rich protein II - malaria parasite (Plasmodium
falciparum) (fragments)
Length = 309
Score = 39.3 bits (90), Expect = 0.019
Identities = 15/27 (55%), Positives = 19/27 (69%)
Frame = +3
Query: 333 HLPIVNHAADNHHAADNYHAVDNHHLY 413
H +HAAD HHAAD +HA D+HH +
Sbjct: 240 HATDAHHAADAHHAADAHHATDSHHAH 266
Score = 37.7 bits (86), Expect = 0.055
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +3
Query: 333 HLPIVNHAADNHHAADNYHAVDNHH 407
H +HAAD HHAAD +HA D HH
Sbjct: 210 HATDAHHAADAHHAADAHHATDAHH 234
Score = 37.0 bits (84), Expect = 0.095
Identities = 14/22 (63%), Positives = 17/22 (76%)
Frame = +3
Query: 348 NHAADNHHAADNYHAVDNHHLY 413
+HAAD HHAAD +HA D HH +
Sbjct: 182 HHAADAHHAADAHHATDAHHAH 203
Score = 36.2 bits (82), Expect = 0.16
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +3
Query: 333 HLPIVNHAADNHHAADNYHAVDNHH 407
H +HAAD HHA D +HA D HH
Sbjct: 228 HATDAHHAADAHHATDAHHAADAHH 252
Score = 36.2 bits (82), Expect = 0.16
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +3
Query: 333 HLPIVNHAADNHHAADNYHAVDNHH 407
H +HA D HHAAD +HA D HH
Sbjct: 222 HAADAHHATDAHHAADAHHATDAHH 246
Score = 36.2 bits (82), Expect = 0.16
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +3
Query: 333 HLPIVNHAADNHHAADNYHAVDNHH 407
H +HA D HHAAD +HA D HH
Sbjct: 234 HAADAHHATDAHHAADAHHAADAHH 258
Score = 36.2 bits (82), Expect = 0.16
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +3
Query: 333 HLPIVNHAADNHHAADNYHAVDNHH 407
H +HAAD HHA D +HA D HH
Sbjct: 216 HAADAHHAADAHHATDAHHAADAHH 240
Score = 36.2 bits (82), Expect = 0.16
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +3
Query: 333 HLPIVNHAADNHHAADNYHAVDNHH 407
H +HA D HHAAD +HA D HH
Sbjct: 204 HAADAHHATDAHHAADAHHAADAHH 228
Score = 35.0 bits (79), Expect = 0.36
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +3
Query: 348 NHAADNHHAADNYHAVDNHH 407
+HAAD HHA D +HA D HH
Sbjct: 203 HHAADAHHATDAHHAADAHH 222
Score = 33.5 bits (75), Expect = 1.0
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +3
Query: 348 NHAADNHHAADNYHAVDNHHLY 413
+HAAD HHAAD +HA HH +
Sbjct: 161 HHAADAHHAADAHHAAYAHHAH 182
Score = 32.3 bits (72), Expect = 2.3
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 348 NHAADNHHAADNYHAVDNHHLY 413
+HA+D HHAAD +HA HH +
Sbjct: 140 HHASDAHHAADAHHAAYAHHAH 161
Score = 30.8 bits (68), Expect = 6.8
Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 3/28 (10%)
Frame = +3
Query: 333 HLPIVNHAADNHHAAD---NYHAVDNHH 407
H +HAAD HHA D +HA D HH
Sbjct: 183 HAADAHHAADAHHATDAHHAHHAADAHH 210
Score = 30.4 bits (67), Expect = 8.8
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 348 NHAADNHHAADNYHAVDNHHLY 413
+H AD HHA +HA D HH +
Sbjct: 38 HHVADAHHAHHAHHAADAHHAH 59
>emb|CAA49544.1| HRPII [Plasmodium falciparum]
Length = 430
Score = 38.5 bits (88), Expect = 0.032
Identities = 16/31 (51%), Positives = 19/31 (60%)
Frame = +3
Query: 333 HLPIVNHAADNHHAADNYHAVDNHHLYPDNY 425
H +HAAD HHAAD +HA D HH + Y
Sbjct: 126 HAADAHHAADAHHAADAHHAADAHHAHHAAY 156
Score = 38.1 bits (87), Expect = 0.042
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +3
Query: 333 HLPIVNHAADNHHAADNYHAVDNHHLY 413
H +HAAD HHAAD +HA D HH +
Sbjct: 180 HATDAHHAADAHHAADAHHAADAHHAH 206
Score = 38.1 bits (87), Expect = 0.042
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +3
Query: 333 HLPIVNHAADNHHAADNYHAVDNHHLY 413
H +HAAD HHAAD +HA D HH +
Sbjct: 276 HATDAHHAADAHHAADAHHAADAHHAH 302
Score = 38.1 bits (87), Expect = 0.042
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +3
Query: 333 HLPIVNHAADNHHAADNYHAVDNHHLY 413
H +HAAD HHAAD +HA D HH +
Sbjct: 372 HATDAHHAADAHHAADAHHATDAHHAH 398
Score = 37.7 bits (86), Expect = 0.055
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +3
Query: 333 HLPIVNHAADNHHAADNYHAVDNHH 407
H +HAAD HHAAD +HA D HH
Sbjct: 120 HATDAHHAADAHHAADAHHAADAHH 144
Score = 36.6 bits (83), Expect = 0.12
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = +3
Query: 348 NHAADNHHAADNYHAVDNHH 407
+HAAD HHAAD +HA D HH
Sbjct: 359 HHAADAHHAADAHHATDAHH 378
Score = 36.6 bits (83), Expect = 0.12
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = +3
Query: 348 NHAADNHHAADNYHAVDNHH 407
+HAAD HHAAD +HA D HH
Sbjct: 263 HHAADAHHAADAHHATDAHH 282
Score = 36.2 bits (82), Expect = 0.16
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +3
Query: 333 HLPIVNHAADNHHAADNYHAVDNHH 407
H +HAAD HHA D +HA D HH
Sbjct: 264 HAADAHHAADAHHATDAHHAADAHH 288
Score = 36.2 bits (82), Expect = 0.16
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +3
Query: 333 HLPIVNHAADNHHAADNYHAVDNHH 407
H +HA D HHAAD +HA D HH
Sbjct: 162 HAADAHHATDAHHAADAHHATDAHH 186
Score = 36.2 bits (82), Expect = 0.16
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +3
Query: 333 HLPIVNHAADNHHAADNYHAVDNHH 407
H +HA D HHAAD +HA D HH
Sbjct: 366 HAADAHHATDAHHAADAHHAADAHH 390
Score = 36.2 bits (82), Expect = 0.16
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +3
Query: 333 HLPIVNHAADNHHAADNYHAVDNHH 407
H +HAAD HHA D +HA D HH
Sbjct: 360 HAADAHHAADAHHATDAHHAADAHH 384
Score = 36.2 bits (82), Expect = 0.16
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +3
Query: 333 HLPIVNHAADNHHAADNYHAVDNHH 407
H +HA D HHAAD +HA D HH
Sbjct: 174 HAADAHHATDAHHAADAHHAADAHH 198
Score = 36.2 bits (82), Expect = 0.16
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +3
Query: 333 HLPIVNHAADNHHAADNYHAVDNHH 407
H +HA D HHAAD +HA D HH
Sbjct: 270 HAADAHHATDAHHAADAHHAADAHH 294
Score = 36.2 bits (82), Expect = 0.16
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +3
Query: 333 HLPIVNHAADNHHAADNYHAVDNHH 407
H +HAAD HHA D +HA D HH
Sbjct: 168 HATDAHHAADAHHATDAHHAADAHH 192
Score = 35.0 bits (79), Expect = 0.36
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +3
Query: 348 NHAADNHHAADNYHAVDNHH 407
+HAAD HHA D +HA D HH
Sbjct: 161 HHAADAHHATDAHHAADAHH 180
Score = 35.0 bits (79), Expect = 0.36
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +3
Query: 348 NHAADNHHAADNYHAVDNHH 407
+HA D HHAAD +HA D HH
Sbjct: 119 HHATDAHHAADAHHAADAHH 138
Score = 32.3 bits (72), Expect = 2.3
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 348 NHAADNHHAADNYHAVDNHHLY 413
+HA+D HHAAD +HA HH +
Sbjct: 242 HHASDAHHAADAHHAAYAHHAH 263
Score = 32.3 bits (72), Expect = 2.3
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 348 NHAADNHHAADNYHAVDNHHLY 413
+HA+D HHAAD +HA HH +
Sbjct: 338 HHASDAHHAADAHHAAYAHHAH 359
>pir||S31773 HRPII protein - malaria parasite (Plasmodium falciparum)
(fragments)
Length = 301
Score = 38.1 bits (87), Expect = 0.042
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +3
Query: 333 HLPIVNHAADNHHAADNYHAVDNHHLY 413
H +HAAD HHAAD +HA D HH +
Sbjct: 101 HATDAHHAADAHHAADAHHAADAHHAH 127
Score = 37.7 bits (86), Expect = 0.055
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +3
Query: 333 HLPIVNHAADNHHAADNYHAVDNHH 407
H +HAAD HHAAD +HA D HH
Sbjct: 218 HATDAHHAADAHHAADAHHATDAHH 242
Score = 36.6 bits (83), Expect = 0.12
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = +3
Query: 348 NHAADNHHAADNYHAVDNHH 407
+HAAD HHAAD +HA D HH
Sbjct: 205 HHAADAHHAADAHHATDAHH 224
Score = 36.2 bits (82), Expect = 0.16
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +3
Query: 333 HLPIVNHAADNHHAADNYHAVDNHH 407
H +HAAD HHA D +HA D HH
Sbjct: 206 HAADAHHAADAHHATDAHHAADAHH 230
Score = 36.2 bits (82), Expect = 0.16
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +3
Query: 333 HLPIVNHAADNHHAADNYHAVDNHH 407
H +HAAD HHA D +HA D HH
Sbjct: 224 HAADAHHAADAHHATDAHHAADAHH 248
Score = 36.2 bits (82), Expect = 0.16
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +3
Query: 333 HLPIVNHAADNHHAADNYHAVDNHH 407
H +HA D HHAAD +HA D HH
Sbjct: 230 HAADAHHATDAHHAADAHHAADAHH 254
Score = 36.2 bits (82), Expect = 0.16
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +3
Query: 333 HLPIVNHAADNHHAADNYHAVDNHH 407
H +HA D HHAAD +HA D HH
Sbjct: 212 HAADAHHATDAHHAADAHHAADAHH 236
Score = 36.2 bits (82), Expect = 0.16
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +3
Query: 333 HLPIVNHAADNHHAADNYHAVDNHH 407
H +HA D HHAAD +HA D HH
Sbjct: 95 HAADAHHATDAHHAADAHHAADAHH 119
Score = 35.0 bits (79), Expect = 0.36
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +3
Query: 348 NHAADNHHAADNYHAVDNHH 407
+HAAD HHA D +HA D HH
Sbjct: 94 HHAADAHHATDAHHAADAHH 113
Score = 32.7 bits (73), Expect = 1.8
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +3
Query: 333 HLPIVNHAADNHHAADNYHAVDNH 404
H +HAAD HHAAD +HA +H
Sbjct: 236 HATDAHHAADAHHAADAHHAAAHH 259
Score = 30.8 bits (68), Expect = 6.8
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +3
Query: 333 HLPIVNHAADNHHAADNYHAVDNHH 407
H +HAAD HHAA +HA D HH
Sbjct: 242 HAADAHHAADAHHAA-AHHATDAHH 265
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 360,129,295
Number of Sequences: 1393205
Number of extensions: 6993140
Number of successful extensions: 19405
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 16927
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18986
length of database: 448,689,247
effective HSP length: 112
effective length of database: 292,650,287
effective search space used: 11413361193
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
