Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004684A_C01 KMC004684A_c01
(712 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||JC4779 peroxidase (EC 1.11.1.7) 1A precursor - alfalfa gi|9... 238 6e-62
gb|AAD37427.1|AF149277_1 peroxidase 1 precursor [Phaseolus vulga... 233 3e-60
pir||T09665 peroxidase (EC 1.11.1.7) pxdC precursor - alfalfa gi... 232 4e-60
emb|CAC38073.1| peroxidase1A [Medicago sativa] 231 7e-60
gb|AAO13837.1|AF403735_1 extensin peroxidase [Lupinus albus] 213 3e-54
>pir||JC4779 peroxidase (EC 1.11.1.7) 1A precursor - alfalfa
gi|971558|emb|CAA62225.1| peroxidase1A [Medicago sativa]
Length = 351
Score = 238 bits (607), Expect = 6e-62
Identities = 117/148 (79%), Positives = 130/148 (87%)
Frame = -2
Query: 711 FFVNRLYNFSNTGNPDPTLNTTYLQTLRSICPHGGPGTTLAHLDPTTPDTLDSQYFSNLQ 532
FFV+RLYNFSNTGNPD TLNTTYLQTL++ICP+GGPGT L LDPTTPDT DS Y+SNLQ
Sbjct: 203 FFVDRLYNFSNTGNPDSTLNTTYLQTLQAICPNGGPGTNLTDLDPTTPDTFDSNYYSNLQ 262
Query: 531 GGKGLFQSDPVLFSTSGAATVAIVNSFSSNQTLFFENFKASMIKMSRIGVLTGSQGEIRK 352
GKGLFQSD LFS +G+ T++IVNSF++NQTLFFENF ASMIKM IGVLTGSQGEIR
Sbjct: 263 VGKGLFQSDQELFSRNGSDTISIVNSFANNQTLFFENFVASMIKMGNIGVLTGSQGEIRT 322
Query: 351 QCNFVNGNSAGLASVTTKESSEYGMASS 268
QCN VNGNS+GLA+V TKESSE GMASS
Sbjct: 323 QCNAVNGNSSGLATVVTKESSEDGMASS 350
>gb|AAD37427.1|AF149277_1 peroxidase 1 precursor [Phaseolus vulgaris]
Length = 341
Score = 233 bits (593), Expect = 3e-60
Identities = 114/148 (77%), Positives = 126/148 (85%)
Frame = -2
Query: 708 FVNRLYNFSNTGNPDPTLNTTYLQTLRSICPHGGPGTTLAHLDPTTPDTLDSQYFSNLQG 529
FVNRLYNFSNTGNPDPTLNTTYLQTLR++CP+GG GT L + DPTTPD D Y+SNLQ
Sbjct: 194 FVNRLYNFSNTGNPDPTLNTTYLQTLRAVCPNGGGGTNLTNFDPTTPDKFDKNYYSNLQV 253
Query: 528 GKGLFQSDPVLFSTSGAATVAIVNSFSSNQTLFFENFKASMIKMSRIGVLTGSQGEIRKQ 349
KGL QSD LFST GA T+ IVN FSSNQTLFFE+FKA+MIKM IGVLTGSQGEIRKQ
Sbjct: 254 HKGLLQSDQELFSTIGADTIDIVNRFSSNQTLFFESFKAAMIKMGNIGVLTGSQGEIRKQ 313
Query: 348 CNFVNGNSAGLASVTTKESSEYGMASSM 265
CNFVNGNSAGLA++ TKESSE G+ SS+
Sbjct: 314 CNFVNGNSAGLATLATKESSEDGLVSSI 341
>pir||T09665 peroxidase (EC 1.11.1.7) pxdC precursor - alfalfa
gi|537317|gb|AAB41811.1| peroxidase [Medicago sativa]
Length = 353
Score = 232 bits (591), Expect = 4e-60
Identities = 117/148 (79%), Positives = 131/148 (88%)
Frame = -2
Query: 711 FFVNRLYNFSNTGNPDPTLNTTYLQTLRSICPHGGPGTTLAHLDPTTPDTLDSQYFSNLQ 532
FFV+RLYNFSNTGNPDPTLNTTYLQTLR+ICP+GGPG+TL LDPTTPDT DS Y+SNL+
Sbjct: 206 FFVDRLYNFSNTGNPDPTLNTTYLQTLRTICPNGGPGSTLTDLDPTTPDTFDSAYYSNLR 265
Query: 531 GGKGLFQSDPVLFSTSGAATVAIVNSFSSNQTLFFENFKASMIKMSRIGVLTGSQGEIRK 352
KGLF+SD VL STSGA T+AIVNSF++NQTLFFE FKASMIKMS+I VLTGSQGEIRK
Sbjct: 266 IQKGLFESDQVLASTSGADTIAIVNSFNNNQTLFFEAFKASMIKMSKIKVLTGSQGEIRK 325
Query: 351 QCNFVNGNSAGLASVTTKESSEYGMASS 268
QCNFVNGNS GLA+ +ESSE G+ SS
Sbjct: 326 QCNFVNGNS-GLATKVIRESSEDGIVSS 352
>emb|CAC38073.1| peroxidase1A [Medicago sativa]
Length = 350
Score = 231 bits (589), Expect = 7e-60
Identities = 115/148 (77%), Positives = 128/148 (85%)
Frame = -2
Query: 711 FFVNRLYNFSNTGNPDPTLNTTYLQTLRSICPHGGPGTTLAHLDPTTPDTLDSQYFSNLQ 532
FFV+RLYNFSNTGNPD TLNTTYLQTL++ICP+GGPGT L LDPTTPDT DS Y+SNLQ
Sbjct: 205 FFVDRLYNFSNTGNPDSTLNTTYLQTLQAICPNGGPGTNLTDLDPTTPDTFDSNYYSNLQ 264
Query: 531 GGKGLFQSDPVLFSTSGAATVAIVNSFSSNQTLFFENFKASMIKMSRIGVLTGSQGEIRK 352
GKGLFQSD LFST+G+ T++IVNSF++NQTLFFENF ASMIKM IGVLTGSQGEIR
Sbjct: 265 VGKGLFQSDQELFSTNGSDTISIVNSFANNQTLFFENFVASMIKMGNIGVLTGSQGEIRT 324
Query: 351 QCNFVNGNSAGLASVTTKESSEYGMASS 268
QCN VNGNS+GLA+V TKE GMASS
Sbjct: 325 QCNAVNGNSSGLATVVTKED---GMASS 349
>gb|AAO13837.1|AF403735_1 extensin peroxidase [Lupinus albus]
Length = 355
Score = 213 bits (541), Expect = 3e-54
Identities = 106/149 (71%), Positives = 122/149 (81%), Gaps = 1/149 (0%)
Frame = -2
Query: 711 FFVNRLYNFSNTGNPDPTLNTTYLQTLRSICPHGGPGTTLAHLDPTTPDTLDSQYFSNLQ 532
FFVNRLYNFSN+G+PDP+LNTTYLQTLR+ICP+GG GT L + DPTTPDT D Y+SNLQ
Sbjct: 206 FFVNRLYNFSNSGSPDPSLNTTYLQTLRTICPNGGAGTNLTNFDPTTPDTFDKNYYSNLQ 265
Query: 531 GGKGLFQSDPVLFSTSGAATVAIVNSFSSNQTLFFENFKASMIKMSRIGVLTGSQGEIRK 352
KGL QSD LFST+GA T++ VNSFS+NQTLFFE FK SMIKM I VLTG+QGEIRK
Sbjct: 266 VHKGLLQSDQELFSTTGADTISTVNSFSTNQTLFFEAFKVSMIKMGNISVLTGNQGEIRK 325
Query: 351 QCNFVNGNSAG-LASVTTKESSEYGMASS 268
CNFV NS G LA++ ++ESSE GM SS
Sbjct: 326 HCNFVIDNSTGLLATMASQESSEDGMVSS 354
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 630,224,118
Number of Sequences: 1393205
Number of extensions: 14253763
Number of successful extensions: 48213
Number of sequences better than 10.0: 429
Number of HSP's better than 10.0 without gapping: 46329
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47701
length of database: 448,689,247
effective HSP length: 120
effective length of database: 281,504,647
effective search space used: 32654539052
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
