Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC004667A_C01 KMC004667A_c01
(677 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB86896.1| syringolide-induced protein 13-1-1 [Glycine max] 197 1e-49
gb|AAK69401.1|AF274564_1 immediate-early fungal elicitor protein... 136 2e-31
ref|NP_566184.1| expressed protein; protein id: At3g02840.1, sup... 123 3e-27
gb|AAM65334.1| unknown [Arabidopsis thaliana] 121 1e-26
ref|NP_198565.1| putative protein; protein id: At5g37490.1 [Arab... 109 3e-23
>dbj|BAB86896.1| syringolide-induced protein 13-1-1 [Glycine max]
Length = 431
Score = 197 bits (501), Expect = 1e-49
Identities = 102/131 (77%), Positives = 115/131 (86%), Gaps = 1/131 (0%)
Frame = -2
Query: 676 LGLVSLLLEIIVDCADKGTCEKALGVLDCICDCKEGKDIAKRNALTLPLVI-KVLRVSHL 500
LGLVSLLLE IVD +KG CEKALGVLDCICDC++GK++ K NAL LPLV+ K+LRVS L
Sbjct: 294 LGLVSLLLEAIVD-GEKGVCEKALGVLDCICDCEKGKEVVKSNALALPLVVRKLLRVSPL 352
Query: 499 ASSFAVSVLRKICDKREEAILIEALQVGAFQKLLVMLQVGCDETTKENATELLKLLNGYK 320
AS FAVS+LRKICDKREE ILIEALQVG FQKL V+LQVGCDE+TKENAT LLKLLNGY+
Sbjct: 353 ASGFAVSILRKICDKREEGILIEALQVGLFQKLSVLLQVGCDESTKENATGLLKLLNGYR 412
Query: 319 GRAECIDSSLS 287
+AEC DSSL+
Sbjct: 413 NKAECTDSSLN 423
>gb|AAK69401.1|AF274564_1 immediate-early fungal elicitor protein CMPG1 [Petroselinum
crispum] gi|14582202|gb|AAK69402.1|AF274565_1
immediate-early fungal elicitor protein CMPG1
[Petroselinum crispum]
Length = 442
Score = 136 bits (343), Expect = 2e-31
Identities = 73/131 (55%), Positives = 102/131 (77%), Gaps = 4/131 (3%)
Frame = -2
Query: 676 LGLVSLLLEIIVDCADKGTCEKALGVLDCICDCKEGKDIAKRNALTLPLVIK-VLRVSHL 500
+GL+ LLE++VDC DK CEKALGVLD +C EG++ A NALT+P+++K +LRVS L
Sbjct: 304 MGLIERLLEMLVDC-DKSICEKALGVLDGLCLTNEGREKAYANALTMPVLVKKILRVSDL 362
Query: 499 ASSFAVSVLRKIC--DKREEA-ILIEALQVGAFQKLLVMLQVGCDETTKENATELLKLLN 329
A+ F+VS++ K+ DK E+ +++EAL+VGAFQKLL++LQ GC+E K+ ATELLKLLN
Sbjct: 363 ATEFSVSIVWKLSKNDKSEDGGVIVEALRVGAFQKLLLLLQFGCNEKIKDKATELLKLLN 422
Query: 328 GYKGRAECIDS 296
++ + ECIDS
Sbjct: 423 LHRDKLECIDS 433
>ref|NP_566184.1| expressed protein; protein id: At3g02840.1, supported by cDNA:
38495. [Arabidopsis thaliana]
gi|6728978|gb|AAF26976.1|AC018363_21 unknown protein
[Arabidopsis thaliana] gi|26452125|dbj|BAC43151.1|
unknown protein [Arabidopsis thaliana]
gi|27311855|gb|AAO00893.1| expressed protein
[Arabidopsis thaliana]
Length = 379
Score = 123 bits (308), Expect = 3e-27
Identities = 67/138 (48%), Positives = 100/138 (71%), Gaps = 9/138 (6%)
Frame = -2
Query: 676 LGLVSLLLEIIVDCADKGTCEKALGVLDCICDCKEGKDIAKRNALTLPLVIK-VLRVSHL 500
LGLV L+ E++V+ A+K CE++L VL+ CD ++GK+ RNAL +PL++K +LRVS L
Sbjct: 233 LGLVELITEMMVNNAEKSVCERSLVVLNATCDNEQGKEDVLRNALIVPLLVKKILRVSDL 292
Query: 499 ASSFAVSVLRKICDKREEA-----ILIEALQVGAFQKLLVMLQVGCDETTKENATELLKL 335
A+ +VS+L K+ +++ +L+EALQVGAF+KLLV+LQVGC++ TKE A+ELL+
Sbjct: 293 ATQCSVSILWKLWKNKKDGECDDRLLVEALQVGAFEKLLVLLQVGCEDKTKEKASELLRN 352
Query: 334 LNGYKGRAE---CIDSSL 290
LN + E C+DSS+
Sbjct: 353 LNRCRNEIEKTNCVDSSM 370
>gb|AAM65334.1| unknown [Arabidopsis thaliana]
Length = 379
Score = 121 bits (303), Expect = 1e-26
Identities = 66/138 (47%), Positives = 99/138 (70%), Gaps = 9/138 (6%)
Frame = -2
Query: 676 LGLVSLLLEIIVDCADKGTCEKALGVLDCICDCKEGKDIAKRNALTLPLVIK-VLRVSHL 500
LGLV L+ E++V+ A+ CE++L VL+ CD ++GK+ RNAL +PL++K +LRVS L
Sbjct: 233 LGLVELITEMMVNNAENSVCERSLVVLNATCDNEQGKEDVLRNALIVPLLVKKILRVSDL 292
Query: 499 ASSFAVSVLRKICDKREEA-----ILIEALQVGAFQKLLVMLQVGCDETTKENATELLKL 335
A+ +VS+L K+ +++ +L+EALQVGAF+KLLV+LQVGC++ TKE A+ELL+
Sbjct: 293 ATQCSVSILWKLWKNKKDGECDDRLLVEALQVGAFEKLLVLLQVGCEDKTKEKASELLRN 352
Query: 334 LNGYKGRAE---CIDSSL 290
LN + E C+DSS+
Sbjct: 353 LNRCRNEIEKTNCVDSSM 370
>ref|NP_198565.1| putative protein; protein id: At5g37490.1 [Arabidopsis thaliana]
Length = 435
Score = 109 bits (273), Expect = 3e-23
Identities = 58/129 (44%), Positives = 93/129 (71%), Gaps = 2/129 (1%)
Frame = -2
Query: 676 LGLVSLLLEIIVDCADKGTCEKALGVLDCICDCKEGKDIAKRNALTLPLVIK-VLRVSHL 500
+GLVS+ +E+IVD A+ CEKAL VLD IC+ + G++ ++NAL +PL++K + +VS L
Sbjct: 297 IGLVSITVEMIVD-AENSVCEKALAVLDAICETEHGREEVRKNALVMPLLVKKIAKVSEL 355
Query: 499 ASSFAVSVLRKICDKREEAILIEALQVGAFQKLLVMLQVGCDETTKENATELLKLLN-GY 323
A+ ++S++ K+ + +A+++GAFQK+L++LQVG E TKE ATELLK++N
Sbjct: 356 ATRSSMSMILKLWKTGNTVAVEDAVRLGAFQKVLLVLQVGYGEETKEKATELLKMMNTQM 415
Query: 322 KGRAECIDS 296
K ++C+DS
Sbjct: 416 KLMSDCVDS 424
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 538,392,886
Number of Sequences: 1393205
Number of extensions: 10761661
Number of successful extensions: 34528
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 32298
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34464
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 29987172312
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
